Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3015

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,202,012	-		Psest_3013	0.86	+3.3
3,202,186	+				-0.6
3,202,218	-				+0.7
3,202,285	+				+0.2
3,202,285	+				-0.6
3,202,286	-				-0.3
3,202,286	-				-0.9
3,202,347	-				-0.3
3,202,507	+		Psest_3014	0.31	+0.7
3,202,507	+		Psest_3014	0.31	-1.9
3,202,507	+		Psest_3014	0.31	-0.1
3,202,660	+		Psest_3014	0.56	-0.2
3,203,001	+		Psest_3015	0.13	+0.3
3,203,002	-		Psest_3015	0.13	+0.9
3,203,034	+		Psest_3015	0.19	-2.3
3,203,034	+		Psest_3015	0.19	-0.6
3,203,034	+		Psest_3015	0.19	-0.9
3,203,035	-		Psest_3015	0.19	-2.3
3,203,035	-		Psest_3015	0.19	+1.0
3,203,035	-		Psest_3015	0.19	+0.2
3,203,035	-		Psest_3015	0.19	-0.9
3,203,038	+		Psest_3015	0.19	-1.2
3,203,038	+		Psest_3015	0.19	-1.0
3,203,039	-		Psest_3015	0.19	+1.7
3,203,095	-		Psest_3015	0.29	-0.9
3,203,121	+		Psest_3015	0.34	-0.4
3,203,171	-		Psest_3015	0.43	-1.5
3,203,199	+		Psest_3015	0.48	-1.7
3,203,199	+		Psest_3015	0.48	-1.2
3,203,199	+		Psest_3015	0.48	-0.1
3,203,199	+		Psest_3015	0.48	-0.3
3,203,199	+		Psest_3015	0.48	-0.1
3,203,229	+		Psest_3015	0.53	-1.8
3,203,475	+				-0.8
3,203,545	+				-0.6
3,203,545	+				-1.6
3,203,545	+				-0.9
3,203,546	-				+1.7
3,203,557	+				-1.6
3,203,572	+				+0.0
3,203,572	+				-0.2
3,203,596	+				-1.2
3,203,614	+				-0.7
3,203,887	+		Psest_3016	0.19	-0.6
3,203,887	+		Psest_3016	0.19	-1.0
3,203,888	-		Psest_3016	0.19	+2.3
3,203,888	-		Psest_3016	0.19	-0.7
3,203,992	+		Psest_3016	0.24	-0.9
3,204,127	+		Psest_3016	0.31	+0.3
3,204,127	+		Psest_3016	0.31	-0.6
3,204,128	-		Psest_3016	0.31	-0.9
3,204,128	-		Psest_3016	0.31	-0.6
3,204,166	+		Psest_3016	0.34	-0.3
3,204,167	-		Psest_3016	0.34	-1.3
3,204,301	+		Psest_3016	0.41	-0.7
3,204,301	+		Psest_3016	0.41	-1.3
3,204,302	-		Psest_3016	0.41	-1.6
3,204,314	-		Psest_3016	0.42	-0.1
3,204,343	+		Psest_3016	0.43	+1.2
3,204,343	+		Psest_3016	0.43	-0.1
3,204,343	+		Psest_3016	0.43	+0.4
3,204,343	+		Psest_3016	0.43	-1.1
3,204,344	-		Psest_3016	0.43	+1.3
3,204,344	-		Psest_3016	0.43	-0.2
3,204,344	-		Psest_3016	0.43	+1.7
3,204,344	-		Psest_3016	0.43	-1.8
3,204,344	-		Psest_3016	0.43	+0.5
3,204,344	-		Psest_3016	0.43	+1.2
3,204,398	+		Psest_3016	0.46	-0.3
3,204,398	+		Psest_3016	0.46	-0.0
3,204,399	-		Psest_3016	0.46	-0.1
3,204,399	-		Psest_3016	0.46	+0.1
3,204,399	-		Psest_3016	0.46	+0.7
3,204,466	+		Psest_3016	0.50	-0.3
3,204,466	+		Psest_3016	0.50	-1.2
3,204,466	+		Psest_3016	0.50	+0.1
3,204,466	+		Psest_3016	0.50	-0.4
3,204,466	+		Psest_3016	0.50	+0.2
3,204,467	-		Psest_3016	0.50	-0.8
3,204,467	-		Psest_3016	0.50	-0.5
3,204,467	-		Psest_3016	0.50	+0.2
3,204,484	+		Psest_3016	0.51	-0.4
3,204,485	-		Psest_3016	0.51	-0.8