Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2966

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,161,722	+		Psest_2965	0.41	+0.5
3,161,722	+		Psest_2965	0.41	+0.2
3,161,722	+		Psest_2965	0.41	+0.9
3,161,723	-		Psest_2965	0.41	+0.4
3,161,723	-		Psest_2965	0.41	-0.5
3,161,723	-		Psest_2965	0.41	-0.3
3,161,776	-		Psest_2965	0.44	+0.4
3,161,776	-		Psest_2965	0.44	+1.1
3,161,792	+		Psest_2965	0.45	-0.9
3,161,792	+		Psest_2965	0.45	+0.4
3,161,792	+		Psest_2965	0.45	+0.8
3,161,792	+		Psest_2965	0.45	+0.4
3,161,792	+		Psest_2965	0.45	+1.2
3,161,792	+		Psest_2965	0.45	+0.4
3,161,793	-		Psest_2965	0.45	+0.1
3,161,793	-		Psest_2965	0.45	+0.9
3,161,793	-		Psest_2965	0.45	+0.6
3,161,793	-		Psest_2965	0.45	+1.3
3,161,793	-		Psest_2965	0.45	-0.6
3,161,793	-		Psest_2965	0.45	+0.6
3,161,793	-		Psest_2965	0.45	-0.0
3,161,815	+		Psest_2965	0.46	+0.7
3,161,815	+		Psest_2965	0.46	-0.2
3,161,815	+		Psest_2965	0.46	+0.2
3,161,816	-		Psest_2965	0.46	+1.1
3,161,837	+		Psest_2965	0.48	+0.5
3,161,838	-		Psest_2965	0.48	+1.1
3,161,838	-		Psest_2965	0.48	+0.3
3,161,851	+		Psest_2965	0.49	+0.4
3,161,851	+		Psest_2965	0.49	+0.5
3,161,851	+		Psest_2965	0.49	-0.8
3,161,851	+		Psest_2965	0.49	+0.2
3,161,851	+		Psest_2965	0.49	-0.2
3,161,851	+		Psest_2965	0.49	+0.1
3,161,852	-		Psest_2965	0.49	+0.7
3,161,852	-		Psest_2965	0.49	+0.3
3,161,852	-		Psest_2965	0.49	+0.4
3,161,852	-		Psest_2965	0.49	+0.2
3,161,852	-		Psest_2965	0.49	+0.2
3,161,852	-		Psest_2965	0.49	+0.4
3,161,852	-		Psest_2965	0.49	+0.3
3,161,852	-		Psest_2965	0.49	+0.5
3,161,879	-		Psest_2965	0.50	+0.3
3,161,879	-		Psest_2965	0.50	+0.4
3,161,901	-		Psest_2965	0.52	+0.4
3,161,988	-		Psest_2965	0.57	+0.7
3,162,067	+		Psest_2965	0.62	+1.2
3,162,086	+		Psest_2965	0.63	+0.4
3,162,087	-		Psest_2965	0.64	-0.1
3,162,087	-		Psest_2965	0.64	-0.1
3,162,087	-		Psest_2965	0.64	+0.6
3,162,089	+		Psest_2965	0.64	+1.0
3,162,089	+		Psest_2965	0.64	+0.2
3,162,090	-		Psest_2965	0.64	-0.0
3,162,101	+		Psest_2965	0.64	+0.9
3,162,102	-		Psest_2965	0.64	+0.2
3,162,103	+		Psest_2965	0.65	+0.6
3,162,103	+		Psest_2965	0.65	-0.4
3,162,104	-		Psest_2965	0.65	+0.8
3,162,104	-		Psest_2965	0.65	+0.1
3,162,104	-		Psest_2965	0.65	+0.6
3,162,115	+		Psest_2965	0.65	+0.7
3,162,116	-		Psest_2965	0.65	+0.4
3,162,227	+		Psest_2965	0.72	+0.2
3,162,228	-		Psest_2965	0.72	+0.7
3,162,228	-		Psest_2965	0.72	+1.0
3,162,228	-		Psest_2965	0.72	+0.8
3,162,231	-		Psest_2965	0.73	+0.5
3,162,231	-		Psest_2965	0.73	+0.0
3,162,231	-		Psest_2965	0.73	+0.4
3,162,231	-		Psest_2965	0.73	+0.4
3,162,255	+		Psest_2965	0.74	+0.7
3,162,305	+		Psest_2965	0.77	+0.7
3,162,305	+		Psest_2965	0.77	+0.4
3,162,306	-		Psest_2965	0.77	+0.3
3,162,306	-		Psest_2965	0.77	+0.4
3,162,306	-		Psest_2965	0.77	-0.2
3,162,306	-		Psest_2965	0.77	-0.3
3,162,306	-		Psest_2965	0.77	+0.3
3,162,353	-		Psest_2965	0.80	+1.9
3,162,367	+		Psest_2965	0.81	+0.7
3,162,367	+		Psest_2965	0.81	+0.2
3,162,367	+		Psest_2965	0.81	+0.9
3,162,368	-		Psest_2965	0.81	+0.2
3,162,368	-		Psest_2965	0.81	+0.5
3,162,368	-		Psest_2965	0.81	+1.4
3,162,373	-		Psest_2965	0.82	+0.2
3,162,442	+		Psest_2965	0.86	-1.0
3,162,442	+		Psest_2965	0.86	+0.5
3,162,442	+		Psest_2965	0.86	+0.1
3,162,443	-		Psest_2965	0.86	+1.4
3,162,449	+		Psest_2965	0.86	+0.9
3,162,449	+		Psest_2965	0.86	-0.6
3,162,449	+		Psest_2965	0.86	+0.2
3,162,476	+		Psest_2965	0.88	+0.5
3,162,476	+		Psest_2965	0.88	+0.1
3,162,817	+		Psest_2966	0.18	+0.4
3,162,817	+		Psest_2966	0.18	+0.3
3,162,817	+		Psest_2966	0.18	+0.8
3,162,817	+		Psest_2966	0.18	+0.3
3,162,817	+		Psest_2966	0.18	+0.7
3,162,818	-		Psest_2966	0.18	+0.2
3,162,818	-		Psest_2966	0.18	+2.0
3,162,818	-		Psest_2966	0.18	-0.2
3,162,818	-		Psest_2966	0.18	-0.2
3,162,818	-		Psest_2966	0.18	+0.2
3,162,841	+		Psest_2966	0.21	+0.6
3,162,841	+		Psest_2966	0.21	+0.1
3,162,842	-		Psest_2966	0.21	+0.1
3,162,842	-		Psest_2966	0.21	-0.9
3,162,845	+		Psest_2966	0.22	+0.9
3,162,982	+		Psest_2966	0.42	+0.2
3,162,982	+		Psest_2966	0.42	+0.5
3,162,983	-		Psest_2966	0.42	+0.7
3,162,983	-		Psest_2966	0.42	+0.7
3,162,983	-		Psest_2966	0.42	+0.5
3,162,983	-		Psest_2966	0.42	+0.8
3,162,983	-		Psest_2966	0.42	-0.4
3,163,185	-		Psest_2966	0.71	+0.1
3,163,185	-		Psest_2966	0.71	-1.4
3,163,233	+		Psest_2966	0.79	+1.7
3,163,331	-				-0.5
3,163,379	+				-0.3
3,163,379	+				-0.8
3,163,379	+				+0.7
3,163,379	+				-0.2
3,163,380	-				+0.4
3,163,380	-				-0.5
3,163,380	-				+0.7
3,163,397	+				+0.5
3,163,397	+				+1.0
3,163,397	+				+0.0
3,163,398	-				-0.1
3,163,398	-				-0.1
3,163,398	-				+0.4
3,163,398	-				-0.1
3,163,526	+		Psest_2967	0.29	+1.1
3,163,529	+		Psest_2967	0.29	+0.5
3,163,529	+		Psest_2967	0.29	-0.1
3,163,613	-		Psest_2967	0.48	+0.4
3,163,613	-		Psest_2967	0.48	-1.1
3,163,825	+				+0.5
3,163,825	+				-1.2
3,163,848	-				-0.7
3,163,942	+		Psest_2968	0.22	+0.0
3,163,942	+		Psest_2968	0.22	-0.3
3,163,942	+		Psest_2968	0.22	+0.6
3,163,943	-		Psest_2968	0.22	-0.7
3,164,051	+		Psest_2968	0.49	+0.5
3,164,051	+		Psest_2968	0.49	+0.5
3,164,051	+		Psest_2968	0.49	-0.4
3,164,051	+		Psest_2968	0.49	-0.7
3,164,051	+		Psest_2968	0.49	-1.0
3,164,051	+		Psest_2968	0.49	-0.2
3,164,051	+		Psest_2968	0.49	+0.2
3,164,051	+		Psest_2968	0.49	-0.9
3,164,052	-		Psest_2968	0.49	+0.0
3,164,052	-		Psest_2968	0.49	+0.2
3,164,052	-		Psest_2968	0.49	+0.0
3,164,052	-		Psest_2968	0.49	+0.2
3,164,052	-		Psest_2968	0.49	-0.6
3,164,052	-		Psest_2968	0.49	+1.1
3,164,052	-		Psest_2968	0.49	-0.3
3,164,052	-		Psest_2968	0.49	+0.6
3,164,052	-		Psest_2968	0.49	+0.8
3,164,052	-		Psest_2968	0.49	+1.0
3,164,052	-		Psest_2968	0.49	+0.2
3,164,052	-		Psest_2968	0.49	+0.5
3,164,052	-		Psest_2968	0.49	+0.2
3,164,146	+		Psest_2968	0.72	-0.5
3,164,146	+		Psest_2968	0.72	-0.2
3,164,146	+		Psest_2968	0.72	+3.0
3,164,146	+		Psest_2968	0.72	+0.0
3,164,147	-		Psest_2968	0.72	-0.4
3,164,147	-		Psest_2968	0.72	-0.1
3,164,147	-		Psest_2968	0.72	+0.1
3,164,147	-		Psest_2968	0.72	+0.5
3,164,147	-		Psest_2968	0.72	-0.7
3,164,147	-		Psest_2968	0.72	+0.4
3,164,147	-		Psest_2968	0.72	-0.9
3,164,147	-		Psest_2968	0.72	+0.3
3,164,278	+				-1.5
3,164,279	-				+1.4
3,164,319	+				+0.1
3,164,338	+				+0.5
3,164,348	-				+0.4