Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2757

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,945,100	+		Psest_2755	0.45	-0.0
2,945,100	+		Psest_2755	0.45	-0.4
2,945,100	+		Psest_2755	0.45	-2.1
2,945,101	-		Psest_2755	0.45	-0.4
2,945,101	-		Psest_2755	0.45	-0.9
2,945,193	+		Psest_2755	0.53	-0.8
2,945,196	+		Psest_2755	0.53	-1.3
2,945,196	+		Psest_2755	0.53	-0.3
2,945,196	+		Psest_2755	0.53	-0.8
2,945,196	+		Psest_2755	0.53	+0.7
2,945,334	+		Psest_2755	0.66	+0.5
2,945,334	+		Psest_2755	0.66	-0.3
2,945,334	+		Psest_2755	0.66	+0.0
2,945,334	+		Psest_2755	0.66	-0.1
2,945,334	+		Psest_2755	0.66	+0.3
2,945,334	+		Psest_2755	0.66	+2.0
2,945,335	-		Psest_2755	0.66	-0.3
2,945,335	-		Psest_2755	0.66	-0.8
2,945,335	-		Psest_2755	0.66	+1.0
2,945,335	-		Psest_2755	0.66	+0.1
2,945,335	-		Psest_2755	0.66	+0.1
2,945,335	-		Psest_2755	0.66	+0.1
2,945,335	-		Psest_2755	0.66	-0.3
2,945,379	+		Psest_2755	0.70	-1.0
2,945,379	+		Psest_2755	0.70	-2.1
2,945,379	+		Psest_2755	0.70	-0.1
2,945,379	+		Psest_2755	0.70	-0.8
2,945,379	+		Psest_2755	0.70	-1.0
2,945,379	+		Psest_2755	0.70	-2.3
2,945,664	+				-0.3
2,945,664	+				-0.7
2,945,665	-				+1.1
2,945,665	-				-0.4
2,945,673	+				-0.8
2,945,673	+				+0.4
2,945,674	-				+0.1
2,945,800	+				-0.3
2,945,800	+				-0.5
2,945,801	-				+0.3
2,945,801	-				+1.0
2,945,801	-				-0.7
2,945,901	+		Psest_2756	0.83	-0.1
2,945,901	+		Psest_2756	0.83	+0.5
2,945,961	-				+2.2
2,945,987	+				+0.0
2,946,152	-		Psest_2757	0.61	-0.1
2,946,161	-		Psest_2757	0.67	+1.5
2,946,292	+				+0.0
2,946,292	+				-0.4
2,946,293	-				-0.3
2,946,293	-				-0.9
2,946,343	+				+0.5
2,946,343	+				-0.2
2,946,344	-				+0.0
2,946,487	-		Psest_2758	0.36	+0.7
2,946,679	+		Psest_2758	0.84	+1.9
2,946,679	+		Psest_2758	0.84	-0.2
2,946,679	+		Psest_2758	0.84	+0.9
2,946,682	+		Psest_2758	0.85	-0.3
2,946,757	-				-0.2
2,946,992	+		Psest_2759	0.29	+0.5
2,947,083	+		Psest_2759	0.43	+0.0
2,947,182	+		Psest_2759	0.58	-0.5
2,947,182	+		Psest_2759	0.58	-0.3
2,947,183	-		Psest_2759	0.58	+0.3
2,947,183	-		Psest_2759	0.58	-0.4
2,947,202	+		Psest_2759	0.61	-0.3
2,947,202	+		Psest_2759	0.61	-0.4
2,947,202	+		Psest_2759	0.61	+0.2
2,947,202	+		Psest_2759	0.61	+0.4
2,947,202	+		Psest_2759	0.61	-0.5
2,947,202	+		Psest_2759	0.61	-0.2
2,947,203	-		Psest_2759	0.61	-0.2
2,947,203	-		Psest_2759	0.61	+0.1
2,947,203	-		Psest_2759	0.61	-0.3