Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2703

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,894,258	+		Psest_2702	0.82	+0.4
2,894,258	+		Psest_2702	0.82	+0.4
2,894,258	+		Psest_2702	0.82	-0.6
2,894,258	+		Psest_2702	0.82	+0.4
2,894,258	+		Psest_2702	0.82	+0.0
2,894,258	+		Psest_2702	0.82	+0.0
2,894,259	-		Psest_2702	0.82	+0.1
2,894,259	-		Psest_2702	0.82	-0.2
2,894,259	-		Psest_2702	0.82	+0.3
2,894,259	-		Psest_2702	0.82	+0.3
2,894,259	-		Psest_2702	0.82	-0.4
2,894,259	-		Psest_2702	0.82	+0.4
2,894,259	-		Psest_2702	0.82	-0.1
2,894,269	-		Psest_2702	0.82	+0.2
2,894,291	+		Psest_2702	0.83	+0.6
2,894,291	+		Psest_2702	0.83	-0.1
2,894,291	+		Psest_2702	0.83	+0.2
2,894,291	+		Psest_2702	0.83	+0.6
2,894,292	-		Psest_2702	0.83	+1.1
2,894,292	-		Psest_2702	0.83	+0.3
2,894,292	-		Psest_2702	0.83	-0.1
2,894,314	-		Psest_2702	0.84	-0.0
2,894,316	+		Psest_2702	0.84	+0.4
2,894,316	+		Psest_2702	0.84	-0.8
2,894,316	+		Psest_2702	0.84	-0.3
2,894,316	+		Psest_2702	0.84	-0.1
2,894,405	+		Psest_2702	0.87	+0.0
2,894,405	+		Psest_2702	0.87	-0.2
2,894,431	+		Psest_2702	0.88	+0.8
2,894,431	+		Psest_2702	0.88	+0.7
2,894,431	+		Psest_2702	0.88	+0.7
2,894,431	+		Psest_2702	0.88	+0.6
2,894,431	+		Psest_2702	0.88	+0.0
2,894,431	+		Psest_2702	0.88	+0.0
2,894,432	-		Psest_2702	0.88	-0.1
2,894,432	-		Psest_2702	0.88	+0.2
2,894,432	-		Psest_2702	0.88	+0.2
2,894,432	-		Psest_2702	0.88	+0.1
2,894,432	-		Psest_2702	0.88	+0.3
2,894,432	-		Psest_2702	0.88	+0.7
2,894,439	+		Psest_2702	0.88	+0.3
2,894,439	+		Psest_2702	0.88	+0.7
2,894,441	+		Psest_2702	0.88	-0.2
2,894,441	+		Psest_2702	0.88	-0.6
2,894,442	-		Psest_2702	0.88	+0.2
2,894,442	-		Psest_2702	0.88	+0.6
2,894,525	+				-0.4
2,894,526	-				-0.6
2,894,553	+				+0.5
2,894,553	+				+0.2
2,894,553	+				+0.2
2,894,669	+				+0.7
2,894,669	+				+0.6
2,894,669	+				+0.4
2,894,669	+				+0.2
2,894,670	-				+0.1
2,894,670	-				-0.1
2,894,695	+				-0.1
2,894,695	+				+0.8
2,894,695	+				-0.3
2,894,696	-				+0.0
2,894,746	-				+0.1
2,894,746	-				+0.2
2,894,746	-				-0.0
2,894,781	+				+1.4
2,894,781	+				-0.2
2,894,793	+				+0.7
2,894,796	+				+2.4
2,894,797	-				+0.6
2,894,797	-				+0.3
2,894,797	-				+0.5
2,894,850	+				+0.9
2,894,850	+				-0.7
2,894,850	+				-1.4
2,894,850	+				+1.1
2,894,850	+				+0.2
2,894,850	+				+0.4
2,894,850	+				+1.0
2,894,850	+				+0.4
2,894,850	+				-0.2
2,894,850	+				+0.2
2,894,850	+				+0.2
2,894,850	+				+0.5
2,894,850	+				+0.5
2,894,850	+				+0.8
2,894,851	-				-0.4
2,894,851	-				+0.5
2,894,851	-				+0.4
2,894,851	-				+0.6
2,894,851	-				-0.1
2,894,851	-				-1.0
2,894,851	-				+0.6
2,894,851	-				-0.6
2,894,851	-				-0.3
2,894,851	-				+0.0
2,894,851	-				+0.4
2,894,851	-				+0.2
2,894,851	-				+0.8
2,894,851	-				+0.4
2,894,851	-				+1.6
2,894,851	-				+0.5
2,894,851	-				+0.2
2,894,851	-				-0.0
2,894,927	+				+0.6
2,894,927	+				+0.7
2,894,927	+				-0.4
2,894,927	+				+1.0
2,894,928	-				-0.1
2,894,928	-				-0.7
2,894,928	-				+0.3
2,895,063	+				+0.2
2,895,063	+				-0.2
2,895,063	+				-0.4
2,895,063	+				-0.8
2,895,063	+				+0.4
2,895,064	-				+0.9
2,895,066	+				+1.0
2,895,079	-				+0.1
2,895,160	-				-0.7
2,895,242	+				-0.4
2,895,242	+				-1.2
2,895,242	+				-0.9
2,895,242	+				+0.7
2,895,243	-				-0.5
2,895,257	-				+0.4
2,895,309	-				+0.2
2,895,406	+		Psest_2703	0.19	+0.7
2,895,708	+		Psest_2703	0.56	+0.1
2,895,708	+		Psest_2703	0.56	+0.2
2,895,708	+		Psest_2703	0.56	+0.2
2,895,709	-		Psest_2703	0.56	+0.6
2,895,709	-		Psest_2703	0.56	+0.5
2,895,856	-		Psest_2703	0.74	+0.6
2,896,104	+				+0.3
2,896,194	+				+0.3
2,896,195	-				+1.2
2,896,195	-				-0.0
2,896,247	-				-1.2
2,896,247	-				-0.4
2,896,385	-				+0.3
2,896,403	-				+1.3
2,896,403	-				+0.4
2,896,403	-				-0.1
2,896,410	-				-0.1
2,896,532	+				+0.9
2,896,532	+				+0.2
2,896,532	+				+0.1
2,896,533	-				+0.2
2,896,533	-				-0.0
2,896,533	-				+0.6
2,896,533	-				-0.3
2,896,533	-				+1.6
2,896,533	-				-0.6
2,896,542	+				+0.4
2,896,542	+				-1.0
2,896,542	+				+0.9
2,896,542	+				-0.6
2,896,542	+				+0.2
2,896,542	+				+0.8
2,896,542	+				-0.3
2,896,542	+				+1.1
2,896,542	+				-2.2
2,896,542	+				+0.5
2,896,542	+				+0.9
2,896,542	+				+0.1
2,896,542	+				-1.1
2,896,543	-				-1.5
2,896,543	-				+0.5
2,896,543	-				+0.2
2,896,543	-				+0.0
2,896,543	-				-0.2
2,896,543	-				-0.6
2,896,543	-				-0.4
2,896,543	-				+0.2
2,896,543	-				+0.4
2,896,543	-				+0.4
2,896,543	-				+0.0
2,896,544	+				-0.1
2,896,544	+				+0.5
2,896,544	+				+0.0
2,896,544	+				-1.2
2,896,544	+				-0.6
2,896,544	+				-0.6
2,896,544	+				-0.2
2,896,544	+				-0.0
2,896,544	+				+0.1
2,896,544	+				+0.2
2,896,544	+				+0.8
2,896,544	+				+1.5
2,896,544	+				+0.4
2,896,545	-				-0.2
2,896,545	-				+0.4
2,896,545	-				+0.2
2,896,545	-				+0.1
2,896,545	-				+0.7
2,896,545	-				-0.0
2,896,545	-				+0.2
2,896,545	-				-0.4
2,896,545	-				+1.0
2,896,545	-				-1.2
2,896,545	-				+0.2
2,896,545	-				-0.6
2,896,545	-				+0.7
2,896,546	+				-0.7
2,896,546	+				+0.5
2,896,546	+				+0.6
2,896,546	+				+0.6
2,896,546	+				-0.2
2,896,546	+				-0.9
2,896,546	+				-1.5
2,896,547	-				+3.1
2,896,547	-				+0.2
2,896,867	+				-0.0
2,896,885	-				+0.1
2,896,969	+				+0.4
2,896,973	+				-0.0
2,896,973	+				-0.1
2,896,973	+				+0.1
2,896,974	-				+1.5
2,896,974	-				-0.2
2,896,989	+				-0.0
2,896,990	-				-0.7
2,897,017	-				+0.4
2,897,017	-				-0.0
2,897,017	-				-0.5