Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2633

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,813,110	+		Psest_2632	0.34	-1.0
2,813,110	+		Psest_2632	0.34	-0.7
2,813,110	+		Psest_2632	0.34	-2.0
2,813,110	+		Psest_2632	0.34	-0.4
2,813,110	+		Psest_2632	0.34	-1.2
2,813,110	+		Psest_2632	0.34	-1.0
2,813,111	-		Psest_2632	0.34	-0.4
2,813,111	-		Psest_2632	0.34	+0.6
2,813,111	-		Psest_2632	0.34	+0.6
2,813,111	-		Psest_2632	0.34	-0.1
2,813,267	+		Psest_2632	0.46	+0.6
2,813,267	+		Psest_2632	0.46	-1.0
2,813,268	-		Psest_2632	0.46	-0.4
2,813,268	-		Psest_2632	0.46	+1.3
2,813,268	-		Psest_2632	0.46	-0.2
2,813,363	+		Psest_2632	0.53	+0.0
2,813,364	-		Psest_2632	0.53	-1.0
2,813,370	-		Psest_2632	0.54	+0.0
2,813,606	+		Psest_2632	0.71	+0.6
2,813,888	+				-1.4
2,813,889	-				+1.0
2,813,935	-				-1.2
2,814,142	+				-0.4
2,814,142	+				-0.5
2,814,142	+				+0.6
2,814,143	-				-0.4
2,814,143	-				+0.2
2,814,143	-				-1.4
2,814,145	+				+1.2
2,814,146	-				-0.4
2,814,146	-				-0.2
2,814,146	-				+0.2
2,814,212	+				+0.0
2,814,213	-				-1.0
2,814,535	+		Psest_2633	0.26	-0.4
2,814,535	+		Psest_2633	0.26	-0.4
2,814,535	+		Psest_2633	0.26	+1.6
2,814,535	+		Psest_2633	0.26	+0.6
2,814,535	+		Psest_2633	0.26	+0.1
2,814,535	+		Psest_2633	0.26	+0.6
2,814,536	-		Psest_2633	0.26	-0.4
2,814,536	-		Psest_2633	0.26	-1.4
2,814,664	+		Psest_2633	0.34	+0.1
2,814,664	+		Psest_2633	0.34	+0.6
2,814,860	-		Psest_2633	0.45	+0.2
2,814,868	+		Psest_2633	0.46	+0.6
2,814,868	+		Psest_2633	0.46	-1.0
2,814,869	-		Psest_2633	0.46	-0.6
2,814,869	-		Psest_2633	0.46	+0.5
2,814,869	-		Psest_2633	0.46	+0.3
2,814,869	-		Psest_2633	0.46	-1.0
2,814,869	-		Psest_2633	0.46	-0.8
2,814,869	-		Psest_2633	0.46	-0.4
2,814,869	-		Psest_2633	0.46	+0.6
2,814,869	-		Psest_2633	0.46	-0.3
2,815,039	+		Psest_2633	0.56	+0.2
2,815,462	+		Psest_2633	0.81	-1.2
2,815,486	+		Psest_2633	0.83	+0.1
2,815,486	+		Psest_2633	0.83	+0.6
2,815,486	+		Psest_2633	0.83	-0.8
2,815,487	-		Psest_2633	0.83	-1.6
2,815,487	-		Psest_2633	0.83	+0.3
2,815,493	+		Psest_2633	0.83	+0.4
2,815,493	+		Psest_2633	0.83	-0.3
2,815,494	-		Psest_2633	0.83	+0.6
2,815,582	+		Psest_2633	0.89	+0.2
2,815,582	+		Psest_2633	0.89	-2.6
2,815,582	+		Psest_2633	0.89	-1.0
2,815,583	-		Psest_2633	0.89	+1.6
2,815,583	-		Psest_2633	0.89	+1.6
2,815,583	-		Psest_2633	0.89	-0.4
2,815,583	-		Psest_2633	0.89	+1.6
2,815,583	-		Psest_2633	0.89	-0.2
2,815,583	-		Psest_2633	0.89	+0.6
2,815,595	-		Psest_2633	0.89	+0.3
2,815,759	+				-1.9
2,815,759	+				+0.1
2,815,760	-				+0.6
2,815,760	-				-1.4
2,815,760	-				-1.2
2,815,760	-				-0.4
2,815,765	+				-0.1
2,815,765	+				+0.6
2,815,843	-				+0.6
2,815,843	-				-0.6
2,815,894	-				-1.2
2,815,933	+				-1.4
2,815,934	-				+0.6
2,815,934	-				+1.6
2,815,934	-				+1.2
2,816,241	+		Psest_2634	0.31	+0.0
2,816,241	+		Psest_2634	0.31	-0.4
2,816,241	+		Psest_2634	0.31	-0.6
2,816,242	-		Psest_2634	0.31	-1.6
2,816,242	-		Psest_2634	0.31	+0.0
2,816,242	-		Psest_2634	0.31	-0.4
2,816,242	-		Psest_2634	0.31	+0.2
2,816,549	+		Psest_2634	0.52	-0.4
2,816,549	+		Psest_2634	0.52	-0.7
2,816,549	+		Psest_2634	0.52	-1.2