Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2520

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,696,942	-		Psest_2518	0.47	+0.1
2,696,992	+		Psest_2518	0.53	-0.2
2,696,993	-		Psest_2518	0.53	-0.2
2,696,993	-		Psest_2518	0.53	-0.4
2,697,020	+		Psest_2518	0.56	+0.8
2,697,020	+		Psest_2518	0.56	-0.9
2,697,020	+		Psest_2518	0.56	-0.1
2,697,021	-		Psest_2518	0.56	-0.3
2,697,021	-		Psest_2518	0.56	+0.7
2,697,021	-		Psest_2518	0.56	+0.2
2,697,033	+		Psest_2518	0.57	-0.3
2,697,033	+		Psest_2518	0.57	+0.9
2,697,033	+		Psest_2518	0.57	+0.4
2,697,034	-		Psest_2518	0.58	+0.2
2,697,034	-		Psest_2518	0.58	+1.1
2,697,034	-		Psest_2518	0.58	+0.4
2,697,163	+		Psest_2518	0.73	+0.7
2,697,166	+		Psest_2518	0.73	+0.1
2,697,166	+		Psest_2518	0.73	+1.7
2,697,167	-		Psest_2518	0.73	-0.6
2,697,167	-		Psest_2518	0.73	-0.8
2,697,167	-		Psest_2518	0.73	-0.3
2,697,167	-		Psest_2518	0.73	+0.6
2,697,167	-		Psest_2518	0.73	-0.2
2,697,167	-		Psest_2518	0.73	-0.0
2,697,167	-		Psest_2518	0.73	+0.1
2,697,167	-		Psest_2518	0.73	+0.2
2,697,167	-		Psest_2518	0.73	+0.9
2,697,170	+		Psest_2518	0.74	-0.9
2,697,170	+		Psest_2518	0.74	-0.0
2,697,171	-		Psest_2518	0.74	-0.4
2,697,171	-		Psest_2518	0.74	+0.5
2,697,171	-		Psest_2518	0.74	+0.3
2,697,171	-		Psest_2518	0.74	+0.3
2,697,171	-		Psest_2518	0.74	+0.1
2,697,171	-		Psest_2518	0.74	+0.8
2,697,171	-		Psest_2518	0.74	+0.5
2,697,171	-		Psest_2518	0.74	-0.0
2,697,171	-		Psest_2518	0.74	+0.5
2,697,300	+		Psest_2518	0.89	-0.2
2,697,301	-		Psest_2518	0.89	+1.5
2,697,301	-		Psest_2518	0.89	+1.1
2,697,783	-				+0.2
2,697,901	+		Psest_2520	0.15	+0.7
2,698,566	-		Psest_2520	0.79	+0.4
2,698,836	-				+0.2
2,698,966	+				-0.3
2,698,966	+				+0.0
2,698,966	+				-0.3
2,698,966	+				+0.1
2,698,967	-				-0.3
2,698,967	-				-0.4
2,698,967	-				+1.7
2,698,967	-				-1.3
2,698,967	-				-1.0
2,698,967	-				-0.2
2,698,967	-				+0.5
2,698,971	+				-0.0
2,699,085	+				+0.0
2,699,086	-				-2.1
2,699,086	-				+0.5
2,699,086	-				-1.3
2,699,086	-				-0.1
2,699,086	-				+0.0
2,699,086	-				-0.2
2,699,086	-				+1.0
2,699,091	+				-0.5
2,699,091	+				-1.3
2,699,091	+				-1.0
2,699,092	-				+0.8
2,699,092	-				+0.1
2,699,094	+				-0.4
2,699,095	-				+1.0
2,699,152	+				-2.8
2,699,153	-				+0.2
2,699,153	-				+0.3
2,699,153	-				-0.1
2,699,158	+				+0.8
2,699,158	+				+1.0
2,699,158	+				+0.2
2,699,158	+				-0.3
2,699,159	-				+0.2
2,699,159	-				+2.1
2,699,159	-				+0.7
2,699,159	-				-0.2
2,699,159	-				+0.3
2,699,159	-				-0.7
2,699,587	-		Psest_2521	0.21	+0.1