Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2456

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,623,671	-				+0.0
2,623,847	+		Psest_2455	0.14	+0.7
2,623,847	+		Psest_2455	0.14	-0.6
2,624,055	+		Psest_2455	0.40	+0.3
2,624,055	+		Psest_2455	0.40	-0.5
2,624,055	+		Psest_2455	0.40	-1.2
2,624,055	+		Psest_2455	0.40	+0.2
2,624,055	+		Psest_2455	0.40	-0.4
2,624,056	-		Psest_2455	0.41	-0.2
2,624,056	-		Psest_2455	0.41	-0.3
2,624,056	-		Psest_2455	0.41	-0.4
2,624,110	-		Psest_2455	0.47	-2.1
2,624,123	-		Psest_2455	0.49	+0.0
2,624,131	+		Psest_2455	0.50	-0.4
2,624,132	-		Psest_2455	0.50	+0.2
2,624,132	-		Psest_2455	0.50	-0.4
2,624,135	+		Psest_2455	0.51	-0.4
2,624,135	+		Psest_2455	0.51	+0.6
2,624,135	+		Psest_2455	0.51	-0.6
2,624,136	-		Psest_2455	0.51	+0.2
2,624,136	-		Psest_2455	0.51	+0.8
2,624,136	-		Psest_2455	0.51	-0.6
2,624,500	+				-0.7
2,624,552	-				-0.2
2,624,711	+				-0.3
2,624,711	+				-0.4
2,624,711	+				+1.6
2,624,712	-				-0.4
2,625,015	+		Psest_2456	0.18	+0.2
2,625,015	+		Psest_2456	0.18	-0.4
2,625,015	+		Psest_2456	0.18	+1.2
2,625,015	+		Psest_2456	0.18	+0.4
2,625,015	+		Psest_2456	0.18	-0.3
2,625,015	+		Psest_2456	0.18	+0.0
2,625,015	+		Psest_2456	0.18	+0.7
2,625,016	-		Psest_2456	0.18	-1.3
2,625,016	-		Psest_2456	0.18	+0.7
2,625,016	-		Psest_2456	0.18	-2.1
2,625,016	-		Psest_2456	0.18	-0.5
2,625,016	-		Psest_2456	0.18	-1.4
2,625,016	-		Psest_2456	0.18	-0.6
2,625,016	-		Psest_2456	0.18	-1.2
2,625,016	-		Psest_2456	0.18	+0.1
2,625,064	+		Psest_2456	0.21	-1.0
2,625,065	-		Psest_2456	0.21	-0.2
2,625,073	-		Psest_2456	0.21	+0.2
2,625,091	+		Psest_2456	0.22	+1.3
2,625,092	-		Psest_2456	0.22	-0.4
2,625,092	-		Psest_2456	0.22	-1.1
2,625,284	-		Psest_2456	0.32	-1.1
2,625,325	+		Psest_2456	0.34	-2.4
2,625,325	+		Psest_2456	0.34	+0.3
2,625,325	+		Psest_2456	0.34	-0.6
2,625,326	-		Psest_2456	0.34	+1.2
2,625,326	-		Psest_2456	0.34	+0.0
2,625,326	-		Psest_2456	0.34	+0.0
2,625,326	-		Psest_2456	0.34	-0.3
2,625,326	-		Psest_2456	0.34	-1.3
2,625,326	-		Psest_2456	0.34	-0.6
2,625,326	-		Psest_2456	0.34	-2.2
2,625,502	+		Psest_2456	0.43	-0.3
2,625,502	+		Psest_2456	0.43	-0.4
2,625,503	-		Psest_2456	0.43	+0.6
2,625,509	-		Psest_2456	0.43	-0.7
2,625,697	+		Psest_2456	0.52	-0.8
2,625,697	+		Psest_2456	0.52	+0.6
2,625,833	-		Psest_2456	0.59	-0.0
2,625,890	-		Psest_2456	0.62	-0.2
2,625,890	-		Psest_2456	0.62	-1.7
2,625,890	-		Psest_2456	0.62	+0.2
2,625,890	-		Psest_2456	0.62	-0.6
2,625,890	-		Psest_2456	0.62	-1.2
2,625,890	-		Psest_2456	0.62	+0.2
2,625,943	+		Psest_2456	0.65	-0.3
2,625,944	-		Psest_2456	0.65	-0.7
2,625,944	-		Psest_2456	0.65	-2.0
2,626,254	-		Psest_2456	0.80	+0.0
2,626,254	-		Psest_2456	0.80	-0.8
2,626,254	-		Psest_2456	0.80	-1.1
2,626,256	-		Psest_2456	0.80	-1.2
2,626,256	-		Psest_2456	0.80	+1.2
2,626,288	+		Psest_2456	0.82	-1.4
2,626,289	-		Psest_2456	0.82	-1.1
2,626,289	-		Psest_2456	0.82	+0.6
2,626,289	-		Psest_2456	0.82	-0.1
2,626,433	-		Psest_2456	0.89	-0.1
2,626,433	-		Psest_2456	0.89	-0.4
2,626,912	-		Psest_2457	0.28	-0.4
2,626,972	-		Psest_2457	0.34	-0.4
2,627,067	+		Psest_2457	0.44	-0.5
2,627,271	+		Psest_2457	0.65	+0.6
2,627,272	-		Psest_2457	0.65	+1.4
2,627,400	+		Psest_2457	0.78	+0.6
2,627,401	-		Psest_2457	0.78	+0.6
2,627,448	+		Psest_2457	0.83	-0.7
2,627,449	-		Psest_2457	0.83	+0.2
2,627,600	+				+0.6
2,627,600	+				+0.1
2,627,601	-				+1.0
2,627,601	-				-2.4
2,627,609	-				-1.2