Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2421

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,583,214	+		Psest_2420	0.49	+1.6
2,583,215	-		Psest_2420	0.49	+1.1
2,583,215	-		Psest_2420	0.49	-1.6
2,583,351	-		Psest_2420	0.64	-2.0
2,583,449	+		Psest_2420	0.75	+0.6
2,583,449	+		Psest_2420	0.75	+0.6
2,583,449	+		Psest_2420	0.75	+0.6
2,583,449	+		Psest_2420	0.75	+0.6
2,583,450	-		Psest_2420	0.76	-1.1
2,583,450	-		Psest_2420	0.76	-0.9
2,583,450	-		Psest_2420	0.76	-0.4
2,583,450	-		Psest_2420	0.76	-1.9
2,583,450	-		Psest_2420	0.76	+0.6
2,583,450	-		Psest_2420	0.76	+1.0
2,583,450	-		Psest_2420	0.76	+0.6
2,583,709	-				+0.1
2,583,738	+				+1.6
2,583,738	+				-0.0
2,583,867	+		Psest_2421	0.12	+0.2
2,583,867	+		Psest_2421	0.12	+0.6
2,583,867	+		Psest_2421	0.12	-0.4
2,583,867	+		Psest_2421	0.12	+0.6
2,583,867	+		Psest_2421	0.12	+1.1
2,583,868	-		Psest_2421	0.12	+1.3
2,583,868	-		Psest_2421	0.12	-0.8
2,583,868	-		Psest_2421	0.12	-0.0
2,583,868	-		Psest_2421	0.12	-0.6
2,584,251	+		Psest_2421	0.59	+1.3
2,584,251	+		Psest_2421	0.59	+0.4
2,584,252	-		Psest_2421	0.59	-0.9
2,584,252	-		Psest_2421	0.59	+0.3
2,584,252	-		Psest_2421	0.59	+1.0
2,584,531	-				+0.6
2,584,718	-				-0.7
2,584,718	-				+0.1
2,584,910	+		Psest_2422	0.14	-1.9
2,585,045	+		Psest_2422	0.20	-1.6
2,585,045	+		Psest_2422	0.20	-0.9
2,585,046	-		Psest_2422	0.20	+0.1
2,585,046	-		Psest_2422	0.20	-1.3
2,585,046	-		Psest_2422	0.20	-0.7
2,585,046	-		Psest_2422	0.20	+0.1
2,585,046	-		Psest_2422	0.20	+0.2
2,585,046	-		Psest_2422	0.20	+2.1
2,585,078	+		Psest_2422	0.21	-0.1
2,585,079	-		Psest_2422	0.21	-1.0
2,585,474	+		Psest_2422	0.38	-0.8
2,585,474	+		Psest_2422	0.38	-0.2
2,585,474	+		Psest_2422	0.38	+0.7
2,585,474	+		Psest_2422	0.38	-0.3
2,585,475	-		Psest_2422	0.38	-0.4
2,585,570	+		Psest_2422	0.42	+0.3
2,585,571	-		Psest_2422	0.42	-0.0