Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2410

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,565,253	+		Psest_2409	0.60	-0.4
2,565,259	+		Psest_2409	0.61	-0.0
2,565,259	+		Psest_2409	0.61	-0.4
2,565,260	-		Psest_2409	0.61	+0.2
2,565,260	-		Psest_2409	0.61	+0.3
2,565,260	-		Psest_2409	0.61	+0.1
2,565,542	-		Psest_2409	0.77	-1.0
2,565,544	-		Psest_2409	0.77	-0.4
2,565,556	+		Psest_2409	0.78	-1.7
2,565,595	+		Psest_2409	0.80	+0.6
2,565,596	-		Psest_2409	0.80	-0.4
2,566,076	+				-0.9
2,566,077	-				-0.5
2,566,077	-				+0.2
2,566,077	-				-1.4
2,566,106	+				-0.8
2,566,106	+				-3.0
2,566,200	+		Psest_2410	0.13	-0.7
2,566,200	+		Psest_2410	0.13	-1.7
2,566,201	-		Psest_2410	0.13	-2.9
2,566,202	+		Psest_2410	0.13	+0.9
2,566,202	+		Psest_2410	0.13	-1.0
2,566,202	+		Psest_2410	0.13	-0.2
2,566,203	-		Psest_2410	0.13	-1.4
2,566,390	+		Psest_2410	0.22	+0.6
2,566,559	+		Psest_2410	0.31	-2.0
2,566,559	+		Psest_2410	0.31	-1.1
2,566,560	-		Psest_2410	0.31	+1.2
2,566,860	-		Psest_2410	0.46	+0.2
2,566,979	+		Psest_2410	0.52	-1.0
2,566,979	+		Psest_2410	0.52	-0.6
2,566,979	+		Psest_2410	0.52	-2.0
2,566,980	-		Psest_2410	0.52	+0.6
2,566,980	-		Psest_2410	0.52	-1.7
2,566,980	-		Psest_2410	0.52	+0.6
2,566,980	-		Psest_2410	0.52	-1.4
2,566,980	-		Psest_2410	0.52	-1.2
2,566,991	+		Psest_2410	0.53	-0.9
2,566,992	-		Psest_2410	0.53	+0.6
2,567,141	+		Psest_2410	0.60	-0.6
2,567,153	+		Psest_2410	0.61	-0.4
2,567,154	-		Psest_2410	0.61	+2.2
2,567,663	+		Psest_2410	0.87	-3.1
2,567,663	+		Psest_2410	0.87	-2.6
2,567,663	+		Psest_2410	0.87	-1.7
2,567,664	-		Psest_2410	0.87	-1.3
2,567,664	-		Psest_2410	0.87	-1.7
2,567,853	+				+0.6
2,567,854	-				-1.7
2,568,170	+				-1.2
2,568,170	+				+1.6
2,568,170	+				+1.0
2,568,170	+				+0.4
2,568,170	+				+1.8
2,568,170	+				+0.3
2,568,170	+				-0.4
2,568,170	+				+0.2
2,568,170	+				-1.0
2,568,171	-				-1.0
2,568,171	-				-1.2
2,568,171	-				-0.6
2,568,171	-				-0.7
2,568,171	-				+0.6
2,568,171	-				+0.3
2,568,171	-				+1.2
2,568,171	-				-0.7
2,568,171	-				+0.4
2,568,171	-				-2.2
2,568,171	-				+0.2
2,568,171	-				+0.1
2,568,171	-				+0.4
2,568,171	-				-0.4
2,568,171	-				-1.2
2,568,171	-				+0.1
2,568,171	-				-0.1
2,568,171	-				-1.0
2,568,343	+				+0.4
2,568,343	+				-1.7
2,568,343	+				-0.4
2,568,343	+				-1.3
2,568,742	+		Psest_2411	0.21	+2.2
2,568,743	-		Psest_2411	0.21	-0.1