Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2357

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,511,542	+				+0.6
2,511,542	+				-1.0
2,511,543	-				-0.0
2,511,747	-		Psest_2356	0.26	-1.2
2,511,867	+		Psest_2356	0.38	-0.5
2,511,887	+		Psest_2356	0.40	-1.2
2,511,888	-		Psest_2356	0.40	-1.4
2,511,888	-		Psest_2356	0.40	+0.6
2,511,888	-		Psest_2356	0.40	-0.9
2,511,888	-		Psest_2356	0.40	-0.2
2,511,888	-		Psest_2356	0.40	-1.0
2,511,888	-		Psest_2356	0.40	+0.1
2,511,920	+		Psest_2356	0.43	+0.0
2,511,921	-		Psest_2356	0.43	+0.6
2,512,118	+		Psest_2356	0.62	+2.2
2,512,118	+		Psest_2356	0.62	-0.4
2,512,118	+		Psest_2356	0.62	-1.4
2,512,119	-		Psest_2356	0.63	-0.5
2,512,119	-		Psest_2356	0.63	+0.6
2,512,184	+		Psest_2356	0.69	-0.7
2,512,185	-		Psest_2356	0.69	+0.2
2,512,185	-		Psest_2356	0.69	-0.2
2,512,185	-		Psest_2356	0.69	+0.1
2,512,202	+		Psest_2356	0.71	+1.6
2,512,202	+		Psest_2356	0.71	-1.7
2,512,202	+		Psest_2356	0.71	+0.0
2,512,203	-		Psest_2356	0.71	+0.6
2,512,203	-		Psest_2356	0.71	+0.2
2,512,203	-		Psest_2356	0.71	-1.4
2,512,203	-		Psest_2356	0.71	-0.1
2,512,212	+		Psest_2356	0.72	+0.6
2,512,212	+		Psest_2356	0.72	-1.0
2,512,212	+		Psest_2356	0.72	-1.4
2,512,212	+		Psest_2356	0.72	-1.0
2,512,212	+		Psest_2356	0.72	-1.0
2,512,212	+		Psest_2356	0.72	+0.6
2,512,212	+		Psest_2356	0.72	-0.4
2,512,212	+		Psest_2356	0.72	+0.6
2,512,213	-		Psest_2356	0.72	+0.2
2,512,213	-		Psest_2356	0.72	+1.2
2,512,213	-		Psest_2356	0.72	-2.4
2,512,213	-		Psest_2356	0.72	-0.4
2,512,213	-		Psest_2356	0.72	-0.7
2,512,213	-		Psest_2356	0.72	+0.6
2,512,213	-		Psest_2356	0.72	+1.6
2,512,213	-		Psest_2356	0.72	-0.4
2,512,213	-		Psest_2356	0.72	+0.3
2,512,213	-		Psest_2356	0.72	-0.0
2,512,213	-		Psest_2356	0.72	-1.2
2,512,331	+		Psest_2356	0.83	+1.6
2,512,343	+		Psest_2356	0.84	-0.3
2,512,343	+		Psest_2356	0.84	+0.6
2,512,343	+		Psest_2356	0.84	+1.6
2,512,343	+		Psest_2356	0.84	+0.2
2,512,343	+		Psest_2356	0.84	-0.4
2,512,343	+		Psest_2356	0.84	-1.4
2,512,343	+		Psest_2356	0.84	+0.6
2,512,343	+		Psest_2356	0.84	-0.4
2,512,343	+		Psest_2356	0.84	+0.6
2,512,344	-		Psest_2356	0.85	+0.3
2,512,344	-		Psest_2356	0.85	+0.1
2,512,344	-		Psest_2356	0.85	+1.8
2,512,464	-				-1.0
2,512,522	-				+0.1
2,512,522	-				+0.6
2,512,522	-				+0.9
2,512,725	+		Psest_2357	0.28	-1.2
2,512,975	-		Psest_2357	0.60	+0.0
2,512,975	-		Psest_2357	0.60	-1.0
2,512,975	-		Psest_2357	0.60	-1.4
2,512,996	+		Psest_2357	0.62	+0.2
2,513,751	-		Psest_2358	0.61	-0.6
2,513,751	-		Psest_2358	0.61	-0.4
2,513,751	-		Psest_2358	0.61	-1.0
2,513,996	+				+0.0
2,513,996	+				-0.7
2,513,996	+				-0.9
2,513,996	+				-0.4
2,513,997	-				+0.0
2,514,169	+		Psest_2359	0.14	-0.4
2,514,169	+		Psest_2359	0.14	+0.5
2,514,170	-		Psest_2359	0.14	+0.8