Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2341

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,493,802	-				-0.4
2,493,802	-				+0.6
2,493,802	-				+0.9
2,493,942	+		Psest_2340	0.22	+0.0
2,493,942	+		Psest_2340	0.22	-0.0
2,493,942	+		Psest_2340	0.22	-0.4
2,493,942	+		Psest_2340	0.22	-0.1
2,493,942	+		Psest_2340	0.22	+0.1
2,493,942	+		Psest_2340	0.22	+0.3
2,493,942	+		Psest_2340	0.22	+0.6
2,493,942	+		Psest_2340	0.22	+0.3
2,493,942	+		Psest_2340	0.22	+0.3
2,493,942	+		Psest_2340	0.22	+0.8
2,493,942	+		Psest_2340	0.22	-1.2
2,493,942	+		Psest_2340	0.22	+0.4
2,493,942	+		Psest_2340	0.22	+0.1
2,493,943	-		Psest_2340	0.22	+0.6
2,493,943	-		Psest_2340	0.22	+0.6
2,493,943	-		Psest_2340	0.22	-0.1
2,493,943	-		Psest_2340	0.22	+0.6
2,493,943	-		Psest_2340	0.22	-0.2
2,493,968	+		Psest_2340	0.25	+1.1
2,494,143	-		Psest_2340	0.44	+0.8
2,494,380	+		Psest_2340	0.69	-0.0
2,494,380	+		Psest_2340	0.69	+0.0
2,494,380	+		Psest_2340	0.69	-0.3
2,494,380	+		Psest_2340	0.69	-0.0
2,494,380	+		Psest_2340	0.69	-1.4
2,494,380	+		Psest_2340	0.69	+0.1
2,494,380	+		Psest_2340	0.69	+0.1
2,494,380	+		Psest_2340	0.69	-1.3
2,494,380	+		Psest_2340	0.69	+0.2
2,494,381	-		Psest_2340	0.69	+0.2
2,494,381	-		Psest_2340	0.69	-0.4
2,494,381	-		Psest_2340	0.69	+0.6
2,494,381	-		Psest_2340	0.69	-0.5
2,494,381	-		Psest_2340	0.69	-0.4
2,494,381	-		Psest_2340	0.69	-0.6
2,494,401	+		Psest_2340	0.71	-0.6
2,494,402	-		Psest_2340	0.71	+0.2
2,494,402	-		Psest_2340	0.71	-0.2
2,494,402	-		Psest_2340	0.71	-0.2
2,494,402	-		Psest_2340	0.71	+0.4
2,494,405	-		Psest_2340	0.72	-0.5
2,494,405	-		Psest_2340	0.72	-0.9
2,494,552	-		Psest_2340	0.87	+1.6
2,494,668	+				-0.7
2,494,688	+				-0.3
2,494,688	+				-0.6
2,494,688	+				-0.2
2,494,688	+				-0.0
2,494,688	+				-0.0
2,494,688	+				-0.4
2,494,688	+				-0.4
2,494,688	+				-0.5
2,494,689	-				-0.6
2,494,689	-				-1.7
2,494,689	-				-0.3
2,494,689	-				-0.3
2,494,689	-				-1.7
2,494,689	-				-0.1
2,494,745	+				+0.0
2,494,746	-				+0.5
2,495,032	-		Psest_2341	0.29	+0.9
2,495,304	-		Psest_2341	0.56	+0.4
2,495,597	+		Psest_2341	0.84	+0.1
2,495,598	-		Psest_2341	0.84	+0.6
2,495,598	-		Psest_2341	0.84	+1.1
2,495,653	+		Psest_2341	0.90	+0.2
2,495,756	+				+1.2
2,495,756	+				+0.4
2,495,757	-				+0.5
2,495,757	-				+1.0
2,495,757	-				+0.3
2,495,757	-				-0.0
2,495,807	+				+1.4
2,495,817	-				+0.0
2,495,819	+				-2.0
2,495,819	+				+0.8
2,495,819	+				-0.1
2,495,820	-				+0.3
2,495,820	-				-0.6
2,495,820	-				-0.1
2,495,969	+		Psest_2342	0.15	-0.3
2,495,969	+		Psest_2342	0.15	-1.2
2,495,969	+		Psest_2342	0.15	+0.5
2,495,970	-		Psest_2342	0.15	-0.6
2,495,970	-		Psest_2342	0.15	+2.4
2,496,051	-		Psest_2342	0.21	+0.3
2,496,051	-		Psest_2342	0.21	-0.4
2,496,072	+		Psest_2342	0.22	-0.0
2,496,073	-		Psest_2342	0.22	-0.2
2,496,073	-		Psest_2342	0.22	+1.4
2,496,098	-		Psest_2342	0.24	+0.1
2,496,311	+		Psest_2342	0.39	-0.8
2,496,311	+		Psest_2342	0.39	-0.3
2,496,311	+		Psest_2342	0.39	-1.0
2,496,311	+		Psest_2342	0.39	+0.3
2,496,311	+		Psest_2342	0.39	+0.1
2,496,312	-		Psest_2342	0.39	-0.1