Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2281

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,428,259	-		Psest_2279	0.62	+0.1
2,428,261	+		Psest_2279	0.63	-0.8
2,428,261	+		Psest_2279	0.63	+0.6
2,428,262	-		Psest_2279	0.63	-0.0
2,428,262	-		Psest_2279	0.63	+0.1
2,428,262	-		Psest_2279	0.63	+0.5
2,428,620	+				+0.1
2,428,621	-				+0.2
2,428,747	-				+0.2
2,428,846	+		Psest_2280	0.14	+1.0
2,428,846	+		Psest_2280	0.14	+0.5
2,428,846	+		Psest_2280	0.14	-0.9
2,428,846	+		Psest_2280	0.14	+0.2
2,428,847	-		Psest_2280	0.14	+0.6
2,428,847	-		Psest_2280	0.14	-0.6
2,428,847	-		Psest_2280	0.14	+0.0
2,429,040	+		Psest_2280	0.53	+1.0
2,429,040	+		Psest_2280	0.53	+0.0
2,429,041	-		Psest_2280	0.53	+0.9
2,429,041	-		Psest_2280	0.53	-0.4
2,429,189	-		Psest_2280	0.82	+1.2
2,429,292	+				+0.4
2,429,292	+				+0.6
2,429,293	-				+0.5
2,429,293	-				+1.2
2,429,458	+		Psest_2281	0.18	-0.4
2,429,478	+		Psest_2281	0.20	+0.1
2,429,479	-		Psest_2281	0.20	+0.9
2,429,479	-		Psest_2281	0.20	-0.0
2,429,776	+		Psest_2281	0.47	-0.1
2,429,848	-		Psest_2281	0.53	+2.4
2,429,848	-		Psest_2281	0.53	-0.1
2,429,890	+		Psest_2281	0.57	+0.1
2,429,890	+		Psest_2281	0.57	+0.4
2,429,891	-		Psest_2281	0.57	+0.7
2,429,891	-		Psest_2281	0.57	+1.6
2,429,897	-		Psest_2281	0.58	-0.1
2,429,953	-		Psest_2281	0.63	+0.5
2,429,953	-		Psest_2281	0.63	-0.1
2,430,045	-		Psest_2281	0.71	+0.6
2,430,126	+		Psest_2281	0.79	+0.9
2,430,126	+		Psest_2281	0.79	+0.1
2,430,272	-				+0.2
2,430,272	-				+0.1
2,430,347	+				+0.1
2,430,348	-				+0.2
2,430,357	+				+0.0
2,430,358	-				+0.4
2,430,479	+		Psest_2282	0.15	+0.9
2,430,479	+		Psest_2282	0.15	+0.1
2,430,722	-		Psest_2282	0.44	+0.4
2,430,866	+		Psest_2282	0.61	+0.5
2,430,939	-		Psest_2282	0.69	-0.5