Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2240

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,391,225	+		Psest_2238	0.65	+0.7
2,391,226	-		Psest_2238	0.65	+2.0
2,391,664	-		Psest_2239	0.43	+0.1
2,391,664	-		Psest_2239	0.43	-0.3
2,391,720	+		Psest_2239	0.52	-0.2
2,391,720	+		Psest_2239	0.52	+0.1
2,391,837	+		Psest_2239	0.69	+0.4
2,391,852	+		Psest_2239	0.71	-0.2
2,392,106	-				-1.5
2,392,106	-				-0.0
2,392,248	+		Psest_2240	0.33	+0.1
2,392,249	-		Psest_2240	0.33	+1.2
2,392,249	-		Psest_2240	0.33	+0.6
2,392,366	+				+0.8
2,392,366	+				+1.1
2,392,370	+				-1.0
2,392,371	-				-1.0
2,392,371	-				-0.3
2,392,455	+				-0.2
2,392,455	+				+0.9
2,392,558	-				-0.1
2,392,640	+		Psest_2241	0.11	-0.8
2,392,641	-		Psest_2241	0.11	-0.2
2,392,761	+		Psest_2241	0.21	-0.1
2,392,762	-		Psest_2241	0.21	+0.3
2,392,762	-		Psest_2241	0.21	+0.7
2,392,784	+		Psest_2241	0.22	+0.4
2,392,784	+		Psest_2241	0.22	+1.4
2,392,785	-		Psest_2241	0.23	+0.2
2,392,912	-		Psest_2241	0.33	+0.6
2,393,021	+		Psest_2241	0.41	-0.1
2,393,022	-		Psest_2241	0.41	-0.6
2,393,027	+		Psest_2241	0.42	-1.0
2,393,027	+		Psest_2241	0.42	-1.4
2,393,165	+		Psest_2241	0.53	-0.2
2,393,165	+		Psest_2241	0.53	+0.3
2,393,166	-		Psest_2241	0.53	-0.3
2,393,171	+		Psest_2241	0.53	+0.5
2,393,171	+		Psest_2241	0.53	+0.4
2,393,172	-		Psest_2241	0.53	-1.4
2,393,274	+		Psest_2241	0.62	+0.2
2,393,274	+		Psest_2241	0.62	-1.0
2,393,274	+		Psest_2241	0.62	-0.3
2,393,274	+		Psest_2241	0.62	+0.8
2,393,275	-		Psest_2241	0.62	-0.6
2,393,275	-		Psest_2241	0.62	-1.1
2,393,279	+		Psest_2241	0.62	+0.1
2,393,291	+		Psest_2241	0.63	+0.2
2,393,292	-		Psest_2241	0.63	+0.8
2,393,342	+		Psest_2241	0.67	-0.3
2,393,342	+		Psest_2241	0.67	-1.2
2,393,343	-		Psest_2241	0.67	+0.5
2,393,343	-		Psest_2241	0.67	-1.4
2,393,345	+		Psest_2241	0.67	+0.2