Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1720

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,825,833	+		Psest_1719	0.44	-0.0
1,826,223	+		Psest_1719	0.66	+1.0
1,826,224	-		Psest_1719	0.66	-0.6
1,826,224	-		Psest_1719	0.66	+0.2
1,826,247	+		Psest_1719	0.67	-1.0
1,826,247	+		Psest_1719	0.67	+0.3
1,826,248	-		Psest_1719	0.67	+0.6
1,826,248	-		Psest_1719	0.67	-0.1
1,826,248	-		Psest_1719	0.67	+0.2
1,826,248	-		Psest_1719	0.67	-0.6
1,826,248	-		Psest_1719	0.67	-0.6
1,826,248	-		Psest_1719	0.67	+0.7
1,826,248	-		Psest_1719	0.67	+0.1
1,826,249	+		Psest_1719	0.67	+0.5
1,826,250	-		Psest_1719	0.67	+0.1
1,826,250	-		Psest_1719	0.67	+0.7
1,827,073	+		Psest_1720	0.24	-0.1
1,827,073	+		Psest_1720	0.24	+0.3
1,827,073	+		Psest_1720	0.24	-1.8
1,827,073	+		Psest_1720	0.24	+0.7
1,827,074	-		Psest_1720	0.24	-0.2
1,827,136	-		Psest_1720	0.30	-0.7
1,827,153	+		Psest_1720	0.32	-0.3
1,827,251	-		Psest_1720	0.41	+0.5
1,827,425	+		Psest_1720	0.59	+0.7
1,827,425	+		Psest_1720	0.59	+1.1
1,827,425	+		Psest_1720	0.59	-0.2
1,827,426	-		Psest_1720	0.59	+0.7
1,827,460	+		Psest_1720	0.62	+0.6
1,827,460	+		Psest_1720	0.62	+1.8
1,827,460	+		Psest_1720	0.62	+0.1
1,827,460	+		Psest_1720	0.62	+0.3
1,827,460	+		Psest_1720	0.62	-0.0
1,827,460	+		Psest_1720	0.62	+0.5
1,827,543	+		Psest_1720	0.70	-0.1
1,827,543	+		Psest_1720	0.70	+0.8
1,827,543	+		Psest_1720	0.70	+0.2
1,827,543	+		Psest_1720	0.70	+0.3
1,827,543	+		Psest_1720	0.70	-0.1
1,827,543	+		Psest_1720	0.70	+0.5
1,827,543	+		Psest_1720	0.70	+1.2
1,827,543	+		Psest_1720	0.70	+0.4
1,827,544	-		Psest_1720	0.70	+1.1
1,827,544	-		Psest_1720	0.70	+0.3
1,827,544	-		Psest_1720	0.70	+1.2
1,827,544	-		Psest_1720	0.70	+0.3
1,827,544	-		Psest_1720	0.70	+0.5
1,827,544	-		Psest_1720	0.70	+1.1
1,827,544	-		Psest_1720	0.70	+0.2
1,827,544	-		Psest_1720	0.70	+1.0
1,827,544	-		Psest_1720	0.70	+0.0
1,827,544	-		Psest_1720	0.70	+0.6
1,827,544	-		Psest_1720	0.70	-0.4
1,827,544	-		Psest_1720	0.70	-0.2
1,827,544	-		Psest_1720	0.70	+0.6
1,827,544	-		Psest_1720	0.70	+0.2
1,827,815	+				-1.7
1,827,844	+				+0.4
1,827,844	+				+0.5
1,827,844	+				-1.3
1,827,844	+				+0.5
1,827,844	+				+0.5
1,827,844	+				+0.2
1,827,844	+				-0.3
1,827,844	+				-0.0
1,827,844	+				-0.5
1,827,844	+				-0.2
1,827,845	-				-1.4
1,827,845	-				+1.0
1,827,852	+				+0.4
1,827,861	+				+0.2
1,828,088	+		Psest_1721	0.29	-0.3
1,828,088	+		Psest_1721	0.29	-0.4
1,828,089	-		Psest_1721	0.29	+0.4
1,828,089	-		Psest_1721	0.29	-0.2
1,828,140	+		Psest_1721	0.35	+0.7
1,828,674	+				+0.5
1,828,675	-				+0.8
1,828,809	+		Psest_1722	0.13	+0.3
1,828,809	+		Psest_1722	0.13	+0.1
1,828,809	+		Psest_1722	0.13	+0.6
1,828,809	+		Psest_1722	0.13	+0.6
1,828,810	-		Psest_1722	0.13	-0.3