Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1636

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,738,117	+		Psest_1635	0.68	-0.7
1,738,117	+		Psest_1635	0.68	-1.5
1,738,728	-		Psest_1635	0.90	-0.5
1,738,812	+				-0.8
1,738,847	+				-0.6
1,738,920	+				-0.7
1,738,920	+				-0.5
1,739,216	-		Psest_1636	0.19	+0.5
1,739,244	+		Psest_1636	0.23	-0.4
1,739,245	-		Psest_1636	0.23	+1.5
1,739,315	+		Psest_1636	0.34	-0.1
1,739,315	+		Psest_1636	0.34	+0.3
1,739,533	-		Psest_1636	0.69	+1.1
1,739,576	+		Psest_1636	0.76	+0.8
1,739,577	-		Psest_1636	0.76	-0.2
1,739,703	+				-0.0
1,739,703	+				+0.3
1,739,703	+				-0.7
1,739,703	+				-0.6
1,739,703	+				+0.4
1,739,703	+				+0.6
1,739,704	-				+0.6
1,739,704	-				+0.1
1,739,704	-				-1.2
1,739,710	+				+0.4
1,739,711	-				+0.3
1,739,711	-				+0.3
1,739,825	-				-0.3
1,739,852	-				+0.5
1,740,014	+		Psest_1637	0.17	+0.2
1,740,068	-		Psest_1637	0.23	-0.7
1,740,123	+		Psest_1637	0.29	-0.1
1,740,259	+		Psest_1637	0.44	-0.4
1,740,259	+		Psest_1637	0.44	-0.4
1,740,259	+		Psest_1637	0.44	-0.2
1,740,259	+		Psest_1637	0.44	+0.9
1,740,259	+		Psest_1637	0.44	-0.7
1,740,259	+		Psest_1637	0.44	-0.3
1,740,260	-		Psest_1637	0.44	-0.3
1,740,260	-		Psest_1637	0.44	+0.5
1,740,446	-		Psest_1637	0.65	+0.2
1,740,446	-		Psest_1637	0.65	+0.1
1,740,446	-		Psest_1637	0.65	-0.6
1,740,447	+		Psest_1637	0.65	-1.6
1,740,448	-		Psest_1637	0.65	+0.6
1,740,512	-		Psest_1637	0.72	-2.2
1,740,667	+		Psest_1637	0.90	-0.1
1,740,667	+		Psest_1637	0.90	-0.6
1,740,668	-		Psest_1637	0.90	-1.1
1,740,668	-		Psest_1637	0.90	-0.3
1,740,675	+				-0.7
1,740,676	-				-0.7
1,740,676	-				-0.9