Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1628

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,729,970	+		Psest_1627	0.55	-1.7
1,729,970	+		Psest_1627	0.55	-1.2
1,729,970	+		Psest_1627	0.55	-0.4
1,729,971	-		Psest_1627	0.55	-2.2
1,729,971	-		Psest_1627	0.55	-1.1
1,729,971	-		Psest_1627	0.55	+0.3
1,729,971	-		Psest_1627	0.55	-1.4
1,730,222	+		Psest_1627	0.73	-1.7
1,730,222	+		Psest_1627	0.73	-0.6
1,730,222	+		Psest_1627	0.73	-1.5
1,730,222	+		Psest_1627	0.73	-0.5
1,730,223	-		Psest_1627	0.73	-0.6
1,730,223	-		Psest_1627	0.73	+0.1
1,730,223	-		Psest_1627	0.73	-0.6
1,730,223	-		Psest_1627	0.73	-0.4
1,730,223	-		Psest_1627	0.73	+1.9
1,730,223	-		Psest_1627	0.73	-0.4
1,730,375	+		Psest_1627	0.85	+0.0
1,730,375	+		Psest_1627	0.85	+0.8
1,730,375	+		Psest_1627	0.85	-1.6
1,730,375	+		Psest_1627	0.85	-0.2
1,730,375	+		Psest_1627	0.85	-1.3
1,730,375	+		Psest_1627	0.85	-0.4
1,730,375	+		Psest_1627	0.85	-0.7
1,730,375	+		Psest_1627	0.85	-0.4
1,730,375	+		Psest_1627	0.85	-1.0
1,730,375	+		Psest_1627	0.85	-0.2
1,730,375	+		Psest_1627	0.85	-0.7
1,730,375	+		Psest_1627	0.85	+0.1
1,730,375	+		Psest_1627	0.85	-0.3
1,730,375	+		Psest_1627	0.85	-0.4
1,730,376	-		Psest_1627	0.85	-0.5
1,730,376	-		Psest_1627	0.85	-0.3
1,730,376	-		Psest_1627	0.85	-0.5
1,730,376	-		Psest_1627	0.85	-0.6
1,730,376	-		Psest_1627	0.85	-1.6
1,730,376	-		Psest_1627	0.85	+0.3
1,730,376	-		Psest_1627	0.85	-0.8
1,730,376	-		Psest_1627	0.85	-0.1
1,730,376	-		Psest_1627	0.85	-0.6
1,730,376	-		Psest_1627	0.85	+0.7
1,730,376	-		Psest_1627	0.85	-1.1
1,730,376	-		Psest_1627	0.85	-1.1
1,730,376	-		Psest_1627	0.85	+1.6
1,730,643	+		Psest_1628	0.17	-1.0
1,730,644	-		Psest_1628	0.18	-1.1
1,730,644	-		Psest_1628	0.18	-0.5
1,730,644	-		Psest_1628	0.18	-1.0
1,730,665	+		Psest_1628	0.25	-0.7
1,730,665	+		Psest_1628	0.25	-0.5
1,730,666	-		Psest_1628	0.25	+0.1
1,730,733	+		Psest_1628	0.47	-0.4
1,730,942	-				+0.8
1,730,942	-				-0.4
1,730,942	-				-0.1
1,730,980	+				+0.2
1,730,980	+				-1.4
1,730,980	+				+0.2
1,730,980	+				+0.0
1,730,981	-				-0.4
1,730,982	+				-1.0
1,730,982	+				-0.3
1,730,982	+				-1.7
1,730,982	+				-0.4
1,730,982	+				-0.7
1,730,982	+				-1.4
1,730,982	+				-0.4
1,730,982	+				+0.2
1,730,983	-				+0.6
1,730,984	+				-1.0
1,730,984	+				-0.6
1,730,984	+				+0.4
1,730,985	-				-0.1
1,730,985	-				-0.0
1,730,985	-				-0.5
1,730,985	-				+0.1
1,730,985	-				+0.3
1,730,985	-				-0.7
1,730,985	-				-1.0
1,730,985	-				-0.2
1,730,985	-				+0.6
1,730,985	-				-0.7
1,730,985	-				-0.0
1,730,985	-				-0.4
1,730,985	-				-0.6
1,730,985	-				-0.6
1,730,985	-				+1.3
1,731,036	+				-1.7
1,731,036	+				-0.1
1,731,037	-				-0.2
1,731,037	-				-0.4
1,731,419	-				-2.0
1,731,440	+				+0.2
1,731,442	+				-0.5
1,731,443	-				-0.2
1,731,443	-				-1.2
1,731,443	-				+0.3
1,731,543	+		Psest_1630	0.15	-1.4
1,731,543	+		Psest_1630	0.15	-0.7
1,731,543	+		Psest_1630	0.15	-0.2
1,731,543	+		Psest_1630	0.15	-0.4
1,731,544	-		Psest_1630	0.15	+0.3
1,731,639	-		Psest_1630	0.26	-2.2
1,731,640	+		Psest_1630	0.26	-0.3
1,731,641	-		Psest_1630	0.26	-0.7
1,731,796	-		Psest_1630	0.44	-1.6
1,731,796	-		Psest_1630	0.44	+0.2
1,731,796	-		Psest_1630	0.44	-0.4
1,731,861	+		Psest_1630	0.52	+2.6
1,731,861	+		Psest_1630	0.52	-0.2
1,731,861	+		Psest_1630	0.52	+0.0
1,731,861	+		Psest_1630	0.52	+0.4
1,731,862	-		Psest_1630	0.52	-1.9
1,731,862	-		Psest_1630	0.52	+0.7
1,731,862	-		Psest_1630	0.52	-1.4