Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1617

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,719,801	+				+0.8
1,719,802	-				+0.7
1,719,802	-				+0.4
1,719,802	-				+0.1
1,719,803	+				+0.1
1,719,804	-				+0.5
1,719,867	-				+0.9
1,719,913	-				-0.2
1,720,173	+				+1.4
1,720,184	+				+0.8
1,720,203	+				+0.2
1,720,571	+				+0.1
1,720,571	+				-0.9
1,720,571	+				-1.0
1,720,571	+				+0.7
1,720,572	-				-0.5
1,720,572	-				-0.1
1,720,572	-				+0.2
1,720,572	-				-0.1
1,720,609	+				+0.5
1,720,609	+				-0.4
1,720,609	+				+0.2
1,720,609	+				-0.2
1,720,609	+				-0.2
1,720,609	+				+1.0
1,720,610	-				+0.0
1,720,610	-				-2.8
1,720,610	-				+0.9
1,720,610	-				-0.1
1,720,610	-				-0.7
1,720,610	-				-0.5
1,720,610	-				-0.3
1,720,610	-				-0.2
1,720,610	-				-0.8
1,720,610	-				+0.5
1,720,610	-				+0.4
1,720,610	-				-0.5
1,720,656	+				-2.6
1,720,656	+				-0.6
1,720,657	-				-0.2
1,720,680	+				+0.2
1,720,812	+		Psest_1617	0.19	+0.6
1,720,882	-		Psest_1617	0.28	+2.6
1,720,900	-		Psest_1617	0.30	-0.2
1,721,178	+		Psest_1617	0.65	-0.1
1,721,179	-		Psest_1617	0.65	-1.4
1,721,179	-		Psest_1617	0.65	+0.6
1,721,408	+				-0.6
1,721,409	-				-0.5