Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1540

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,638,518	-		Psest_1539	0.32	-0.3
1,638,699	-		Psest_1539	0.47	+0.0
1,638,699	-		Psest_1539	0.47	+1.3
1,638,740	-		Psest_1539	0.50	-0.2
1,639,098	+		Psest_1539	0.79	-0.2
1,639,099	-		Psest_1539	0.79	-0.6
1,639,155	-		Psest_1539	0.84	-0.6
1,639,219	+		Psest_1539	0.89	-0.6
1,639,219	+		Psest_1539	0.89	+0.2
1,639,219	+		Psest_1539	0.89	-0.9
1,639,219	+		Psest_1539	0.89	-0.3
1,639,219	+		Psest_1539	0.89	+0.4
1,639,219	+		Psest_1539	0.89	+0.2
1,639,220	-		Psest_1539	0.89	+0.4
1,639,220	-		Psest_1539	0.89	+0.7
1,639,220	-		Psest_1539	0.89	+0.4
1,639,220	-		Psest_1539	0.89	-0.9
1,639,307	+				-0.7
1,639,471	+				-2.1
1,639,471	+				-0.3
1,639,471	+				-0.6
1,639,471	+				-0.2
1,639,472	-				+0.1
1,639,472	-				-0.0
1,639,472	-				+0.2
1,639,472	-				-0.1
1,639,840	-		Psest_1540	0.41	+0.4
1,639,840	-		Psest_1540	0.41	+1.0
1,639,840	-		Psest_1540	0.41	+0.8
1,640,528	+		Psest_1541	0.21	-1.7
1,640,528	+		Psest_1541	0.21	-0.0
1,640,552	+		Psest_1541	0.25	+2.0
1,640,706	+		Psest_1541	0.46	-0.9
1,640,706	+		Psest_1541	0.46	-0.3
1,640,706	+		Psest_1541	0.46	-0.1
1,640,707	-		Psest_1541	0.46	+1.3
1,640,707	-		Psest_1541	0.46	-0.6
1,640,914	-		Psest_1541	0.76	-0.7
1,640,934	+		Psest_1541	0.79	-1.0
1,640,934	+		Psest_1541	0.79	+0.0
1,640,935	-		Psest_1541	0.79	+0.4
1,640,935	-		Psest_1541	0.79	+0.4
1,640,951	+		Psest_1541	0.81	+0.1
1,640,951	+		Psest_1541	0.81	-0.9
1,640,951	+		Psest_1541	0.81	-0.9
1,640,951	+		Psest_1541	0.81	-0.1
1,640,951	+		Psest_1541	0.81	+0.3
1,640,952	-		Psest_1541	0.81	+0.9
1,640,952	-		Psest_1541	0.81	-0.0
1,640,952	-		Psest_1541	0.81	-0.4
1,640,952	-		Psest_1541	0.81	+0.4
1,640,952	-		Psest_1541	0.81	-0.3
1,640,952	-		Psest_1541	0.81	+0.4
1,640,952	-		Psest_1541	0.81	+1.0
1,640,952	-		Psest_1541	0.81	+0.0
1,640,954	+		Psest_1541	0.81	+0.7
1,640,954	+		Psest_1541	0.81	+0.7
1,640,954	+		Psest_1541	0.81	-0.0
1,640,955	-		Psest_1541	0.81	+0.3
1,641,010	+		Psest_1541	0.89	-0.5
1,641,010	+		Psest_1541	0.89	+0.3
1,641,011	-		Psest_1541	0.89	-0.4
1,641,011	-		Psest_1541	0.89	+0.7
1,641,011	-		Psest_1541	0.89	+0.6
1,641,312	-		Psest_1542	0.31	+0.7
1,641,328	+		Psest_1542	0.33	-0.4
1,641,328	+		Psest_1542	0.33	-0.3
1,641,328	+		Psest_1542	0.33	+0.1
1,641,328	+		Psest_1542	0.33	+0.1
1,641,328	+		Psest_1542	0.33	-0.3
1,641,328	+		Psest_1542	0.33	+0.7
1,641,329	-		Psest_1542	0.33	-1.1
1,641,329	-		Psest_1542	0.33	+2.3