Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1530

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,631,327	+		Psest_1528	0.80	-0.2
1,631,327	+		Psest_1528	0.80	-0.1
1,631,328	-		Psest_1528	0.81	+0.5
1,631,455	+				-0.1
1,631,469	+				-0.6
1,631,469	+				+0.0
1,631,470	-				+0.6
1,631,470	-				-1.4
1,631,470	-				+0.0
1,631,542	+				-0.8
1,631,542	+				-0.1
1,631,542	+				-0.5
1,631,542	+				-0.5
1,631,580	+				+0.2
1,631,580	+				-0.4
1,631,580	+				+0.7
1,631,581	-				+0.2
1,631,581	-				-0.0
1,631,581	-				-0.6
1,631,581	-				+0.7
1,631,846	+		Psest_1529	0.35	-0.1
1,631,846	+		Psest_1529	0.35	+0.1
1,631,846	+		Psest_1529	0.35	+0.7
1,631,846	+		Psest_1529	0.35	-1.0
1,631,846	+		Psest_1529	0.35	-0.1
1,631,846	+		Psest_1529	0.35	+0.7
1,631,847	-		Psest_1529	0.35	+0.6
1,631,847	-		Psest_1529	0.35	+0.6
1,631,847	-		Psest_1529	0.35	-0.4
1,631,847	-		Psest_1529	0.35	+0.9
1,631,847	-		Psest_1529	0.35	-0.7
1,631,848	+		Psest_1529	0.35	-0.4
1,631,975	+		Psest_1529	0.53	+0.0
1,632,014	+		Psest_1529	0.59	+1.1
1,632,014	+		Psest_1529	0.59	-0.3
1,632,014	+		Psest_1529	0.59	-0.2
1,632,014	+		Psest_1529	0.59	-1.8
1,632,014	+		Psest_1529	0.59	+0.6
1,632,014	+		Psest_1529	0.59	+0.7
1,632,014	+		Psest_1529	0.59	+0.2
1,632,014	+		Psest_1529	0.59	-0.6
1,632,014	+		Psest_1529	0.59	+0.4
1,632,014	+		Psest_1529	0.59	+0.8
1,632,014	+		Psest_1529	0.59	+0.9
1,632,014	+		Psest_1529	0.59	+1.1
1,632,014	+		Psest_1529	0.59	+0.9
1,632,014	+		Psest_1529	0.59	+0.1
1,632,014	+		Psest_1529	0.59	-0.8
1,632,014	+		Psest_1529	0.59	-0.0
1,632,014	+		Psest_1529	0.59	-0.0
1,632,015	-		Psest_1529	0.59	+0.0
1,632,015	-		Psest_1529	0.59	-1.1
1,632,015	-		Psest_1529	0.59	-0.8
1,632,015	-		Psest_1529	0.59	+0.5
1,632,015	-		Psest_1529	0.59	-0.8
1,632,015	-		Psest_1529	0.59	-0.8
1,632,015	-		Psest_1529	0.59	+0.2
1,632,015	-		Psest_1529	0.59	-0.3
1,632,015	-		Psest_1529	0.59	+1.0
1,632,015	-		Psest_1529	0.59	-1.3
1,632,015	-		Psest_1529	0.59	-0.8
1,632,015	-		Psest_1529	0.59	-0.7
1,632,015	-		Psest_1529	0.59	-0.2
1,632,015	-		Psest_1529	0.59	+0.3
1,632,015	-		Psest_1529	0.59	-0.5
1,632,015	-		Psest_1529	0.59	+0.4
1,632,015	-		Psest_1529	0.59	-0.3
1,632,015	-		Psest_1529	0.59	+0.0
1,632,210	-		Psest_1529	0.86	+0.1
1,632,210	-		Psest_1529	0.86	+1.4
1,632,306	+				-0.1
1,632,307	-				-1.1
1,632,312	+				-0.6
1,632,325	-				-0.3
1,632,325	-				-0.3
1,632,361	+		Psest_1530	0.17	+0.0
1,632,421	+		Psest_1530	0.35	+0.3
1,632,421	+		Psest_1530	0.35	+0.4
1,632,421	+		Psest_1530	0.35	-0.5
1,632,421	+		Psest_1530	0.35	+0.4
1,632,422	-		Psest_1530	0.35	+1.4
1,632,422	-		Psest_1530	0.35	+1.7
1,632,422	-		Psest_1530	0.35	+1.1
1,632,422	-		Psest_1530	0.35	+0.5
1,632,422	-		Psest_1530	0.35	-0.6
1,632,422	-		Psest_1530	0.35	+1.4
1,632,422	-		Psest_1530	0.35	-1.1
1,632,422	-		Psest_1530	0.35	-1.3
1,632,508	+		Psest_1530	0.61	+0.4
1,632,508	+		Psest_1530	0.61	+0.4
1,632,970	+		Psest_1531	0.24	-0.1
1,632,970	+		Psest_1531	0.24	-0.1
1,633,074	+		Psest_1531	0.31	+3.0
1,633,075	-		Psest_1531	0.31	-1.5
1,633,300	+		Psest_1531	0.47	+1.2
1,633,300	+		Psest_1531	0.47	-0.9
1,633,300	+		Psest_1531	0.47	+0.3
1,633,300	+		Psest_1531	0.47	+0.2
1,633,301	-		Psest_1531	0.47	+0.5
1,633,301	-		Psest_1531	0.47	-0.6
1,633,301	-		Psest_1531	0.47	-1.6
1,633,301	-		Psest_1531	0.47	+0.0
1,633,301	-		Psest_1531	0.47	+0.9
1,633,301	-		Psest_1531	0.47	+1.2
1,633,305	-		Psest_1531	0.48	+0.9
1,633,305	-		Psest_1531	0.48	-0.2
1,633,305	-		Psest_1531	0.48	+1.9
1,633,305	-		Psest_1531	0.48	+0.4
1,633,305	-		Psest_1531	0.48	-0.9
1,633,422	+		Psest_1531	0.56	+0.3
1,633,423	-				+2.7
1,633,423	-		Psest_1531	0.56	+0.2
1,633,493	+		Psest_1531	0.61	-0.2
1,633,493	+		Psest_1531	0.61	-0.9
1,633,494	-		Psest_1531	0.61	+0.9
1,633,494	-		Psest_1531	0.61	-0.2