Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1464

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,570,666	-		Psest_1462	0.55	-0.1
1,570,666	-		Psest_1462	0.55	+1.0
1,571,036	-		Psest_1462	0.88	-0.4
1,571,036	-		Psest_1462	0.88	-0.7
1,571,036	-		Psest_1462	0.88	-0.3
1,571,036	-		Psest_1462	0.88	+0.0
1,571,036	-		Psest_1462	0.88	-0.1
1,571,212	-				-0.0
1,571,469	+		Psest_1463	0.69	+0.4
1,571,662	+				+0.5
1,571,662	+				+0.5
1,571,662	+				+1.7
1,571,662	+				+0.4
1,571,662	+				+0.2
1,571,662	+				+0.4
1,571,662	+				-1.0
1,571,662	+				+0.5
1,571,662	+				+0.4
1,571,662	+				+0.2
1,571,662	+				+1.7
1,571,662	+				+0.9
1,571,662	+				+0.1
1,571,662	+				-0.7
1,571,663	-				-1.5
1,571,663	-				+2.7
1,571,663	-				-0.8
1,571,663	-				+0.9
1,571,663	-				-0.5
1,571,663	-				+0.7
1,571,663	-				+0.9
1,571,663	-				+0.1
1,571,663	-				-0.5
1,571,663	-				+0.4
1,571,663	-				+0.3
1,571,663	-				+0.0
1,571,664	+				-1.3
1,571,665	-				-0.0
1,571,935	+		Psest_1464	0.28	+0.7
1,572,028	+		Psest_1464	0.36	+0.7
1,572,029	-		Psest_1464	0.36	+0.1
1,572,081	+		Psest_1464	0.40	+0.4
1,572,100	+		Psest_1464	0.42	+0.0
1,572,101	-		Psest_1464	0.42	+0.1
1,572,151	+		Psest_1464	0.46	+0.7
1,572,151	+		Psest_1464	0.46	-0.3
1,572,151	+		Psest_1464	0.46	-1.5
1,572,151	+		Psest_1464	0.46	-0.0
1,572,152	-		Psest_1464	0.46	+1.1
1,572,152	-		Psest_1464	0.46	-0.8
1,572,152	-		Psest_1464	0.46	+1.3
1,572,152	-		Psest_1464	0.46	+0.6
1,572,152	-		Psest_1464	0.46	+0.6
1,572,152	-		Psest_1464	0.46	-0.0
1,572,253	-		Psest_1464	0.55	-0.6
1,572,253	-		Psest_1464	0.55	+1.1
1,572,253	-		Psest_1464	0.55	+0.7
1,572,667	+		Psest_1464	0.89	+0.3
1,572,667	+		Psest_1464	0.89	-0.6
1,572,667	+		Psest_1464	0.89	+0.4
1,572,667	+		Psest_1464	0.89	+1.5
1,572,667	+		Psest_1464	0.89	+0.1
1,572,668	-		Psest_1464	0.89	+0.0
1,572,668	-		Psest_1464	0.89	+0.3
1,572,670	+		Psest_1464	0.89	+0.2
1,572,730	+				-0.4
1,572,730	+				-0.1
1,572,882	-				-1.8
1,572,882	-				-1.3