Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1386

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,494,516	-				-0.4
1,494,516	-				+0.4
1,494,527	+				-0.2
1,494,671	+				-1.0
1,494,672	-				+0.5
1,494,672	-				-0.0
1,494,672	-				-0.4
1,494,672	-				-2.7
1,494,672	-				-0.8
1,494,747	+				-0.3
1,494,748	-				+0.4
1,494,753	+				+0.2
1,494,754	-				+1.0
1,494,761	+				+2.1
1,494,761	+				-0.4
1,494,761	+				-1.2
1,494,762	-				+0.3
1,495,015	-		Psest_1384	0.68	-0.2
1,495,181	+				-0.2
1,495,181	+				-0.6
1,495,181	+				-0.2
1,495,182	-				+0.5
1,495,182	-				-0.6
1,495,182	-				-1.8
1,495,182	-				-0.4
1,495,182	-				+0.5
1,495,230	-				-0.8
1,495,374	-		Psest_1386	0.10	+0.1
1,495,539	+		Psest_1386	0.24	+0.4
1,495,829	+		Psest_1386	0.47	+0.5
1,495,830	-		Psest_1386	0.47	-0.5
1,495,830	-		Psest_1386	0.47	+1.4
1,495,949	-		Psest_1386	0.57	-0.8
1,496,223	+		Psest_1386	0.79	-0.9
1,496,223	+		Psest_1386	0.79	+0.3
1,496,223	+		Psest_1386	0.79	+1.0
1,496,224	-		Psest_1386	0.79	+0.2
1,496,224	-		Psest_1386	0.79	+2.4
1,496,224	-		Psest_1386	0.79	-0.4
1,496,224	-		Psest_1386	0.79	-0.4
1,496,224	-		Psest_1386	0.79	+0.7
1,496,367	+				+0.2
1,496,511	-				+0.6
1,496,564	+				-0.0
1,496,564	+				-1.0
1,496,565	-				-1.8
1,496,565	-				-0.4
1,496,653	+				+0.5
1,497,026	+				+1.8
1,497,026	+				-0.3
1,497,027	-				-0.0
1,497,027	-				+0.4
1,497,044	+				-0.7
1,497,045	-				+0.1
1,497,045	-				+0.6
1,497,050	+				-0.8
1,497,050	+				+1.1
1,497,050	+				-0.2
1,497,051	-				-0.5
1,497,051	-				+1.1
1,497,052	+				-0.4
1,497,369	+		Psest_1388	0.42	-0.9
1,497,369	+		Psest_1388	0.42	-0.8