Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1382

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,491,245	+				-0.5
1,491,245	+				+0.1
1,491,245	+				-1.0
1,491,245	+				+0.8
1,491,245	+				+0.8
1,491,245	+				+0.4
1,491,245	+				+1.8
1,491,245	+				+0.6
1,491,245	+				+0.2
1,491,245	+				-0.4
1,491,246	-				+1.8
1,491,246	-				+0.4
1,491,246	-				+1.8
1,491,246	-				+0.1
1,491,246	-				+0.8
1,491,385	-		Psest_1381	0.19	-0.2
1,491,486	+		Psest_1381	0.29	-0.8
1,491,487	-		Psest_1381	0.29	-0.4
1,491,533	+		Psest_1381	0.34	+0.8
1,491,609	+		Psest_1381	0.42	+0.4
1,491,609	+		Psest_1381	0.42	+0.4
1,491,610	-		Psest_1381	0.42	-0.2
1,491,610	-		Psest_1381	0.42	+0.8
1,491,616	-		Psest_1381	0.43	+1.2
1,491,616	-		Psest_1381	0.43	+0.2
1,491,628	-		Psest_1381	0.44	+1.8
1,491,628	-		Psest_1381	0.44	+0.1
1,491,654	+		Psest_1381	0.47	-0.8
1,491,654	+		Psest_1381	0.47	-1.5
1,491,703	-		Psest_1381	0.52	+0.2
1,492,146	+				+0.5
1,492,147	-				+1.2
1,492,147	-				+0.8
1,492,148	+				-0.2
1,492,149	-				-1.1
1,492,149	-				+0.8
1,492,149	-				-0.7
1,492,149	-				-0.8
1,492,149	-				+2.1
1,492,286	+		Psest_1382	0.26	+1.1
1,492,286	+		Psest_1382	0.26	+1.0
1,492,286	+		Psest_1382	0.26	+0.5
1,492,287	-		Psest_1382	0.27	-0.9
1,492,287	-		Psest_1382	0.27	+0.1
1,492,287	-		Psest_1382	0.27	+1.5
1,492,613	+				-1.2
1,492,613	+				+0.6
1,492,613	+				-0.1
1,492,613	+				+0.1
1,492,614	-				-0.0
1,492,634	+				-2.4
1,492,650	-				+0.3
1,493,271	-		Psest_1383	0.27	+0.1
1,493,444	+		Psest_1383	0.36	+1.8
1,493,444	+		Psest_1383	0.36	+0.1
1,493,495	+		Psest_1383	0.39	-0.8
1,493,495	+		Psest_1383	0.39	+0.2