Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1358

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,467,279	+		Psest_1356	0.88	+0.7
1,467,279	+		Psest_1356	0.88	-1.8
1,467,279	+		Psest_1356	0.88	+0.8
1,467,280	-		Psest_1356	0.88	+0.6
1,467,457	-				+1.0
1,467,482	-				+0.5
1,467,607	+		Psest_1357	0.21	-1.5
1,467,713	-		Psest_1357	0.36	-0.8
1,467,985	+		Psest_1357	0.75	-0.1
1,467,985	+		Psest_1357	0.75	-1.2
1,467,985	+		Psest_1357	0.75	+0.7
1,468,105	+				-0.2
1,468,105	+				+1.1
1,468,105	+				+1.2
1,468,106	-				-1.0
1,468,106	-				-0.2
1,468,106	-				-0.9
1,468,229	+				-0.2
1,468,230	-				-1.5
1,468,230	-				+0.4
1,468,230	-				-0.2
1,468,291	+				+0.2
1,468,291	+				+0.2
1,468,291	+				+0.8
1,468,291	+				+0.1
1,468,292	-				+0.8
1,468,292	-				-0.2
1,468,292	-				+0.2
1,468,292	-				-0.2
1,468,292	-				-0.2
1,468,324	+				-1.6
1,468,324	+				-1.3
1,468,324	+				+0.7
1,468,324	+				+0.2
1,468,324	+				-0.1
1,468,324	+				-0.2
1,468,324	+				-1.2
1,468,324	+				-1.2
1,468,324	+				+0.2
1,468,325	-				+0.5
1,468,325	-				-0.0
1,468,325	-				+0.5
1,468,325	-				+0.0
1,468,325	-				+0.5
1,468,325	-				-0.3
1,468,325	-				-0.1
1,468,325	-				+0.7
1,468,402	+		Psest_1358	0.13	+0.7
1,468,403	-		Psest_1358	0.13	-0.2
1,468,466	+		Psest_1358	0.18	+0.3
1,468,468	+		Psest_1358	0.18	+0.3
1,468,468	+		Psest_1358	0.18	+0.5
1,468,468	+		Psest_1358	0.18	+0.8
1,468,469	-		Psest_1358	0.18	+0.5
1,468,898	-		Psest_1358	0.53	+0.4
1,468,909	+		Psest_1358	0.53	+0.0
1,468,909	+		Psest_1358	0.53	+0.8
1,468,910	-		Psest_1358	0.54	-0.2
1,468,910	-		Psest_1358	0.54	+0.8
1,469,155	+		Psest_1358	0.73	+0.5
1,469,156	-		Psest_1358	0.73	+1.4
1,469,156	-		Psest_1358	0.73	-0.1
1,469,156	-		Psest_1358	0.73	-0.2
1,469,362	+		Psest_1358	0.90	+0.2
1,469,362	+		Psest_1358	0.90	-1.1
1,469,363	-		Psest_1358	0.90	-0.1
1,469,363	-		Psest_1358	0.90	-0.8
1,469,363	-		Psest_1358	0.90	+0.3
1,469,363	-		Psest_1358	0.90	+0.3
1,469,363	-		Psest_1358	0.90	-0.1
1,469,589	+				+0.5
1,469,590	-				+0.6
1,469,642	+				-0.3
1,469,642	+				+0.0
1,469,642	+				-0.6
1,469,694	-		Psest_1359	0.16	-0.2
1,469,718	+		Psest_1359	0.21	-0.1
1,469,718	+		Psest_1359	0.21	-0.4
1,469,719	-		Psest_1359	0.21	+1.1
1,469,719	-		Psest_1359	0.21	+0.5
1,469,719	-		Psest_1359	0.21	-0.3
1,469,719	-		Psest_1359	0.21	+0.2
1,469,719	-		Psest_1359	0.21	+0.5
1,469,719	-		Psest_1359	0.21	-1.1
1,470,136	+				+0.2
1,470,136	+				+0.1
1,470,137	-				+0.2
1,470,137	-				-0.2
1,470,137	-				+0.8
1,470,165	-				+2.8
1,470,336	+		Psest_1360	0.16	-0.2
1,470,336	+		Psest_1360	0.16	+1.8
1,470,336	+		Psest_1360	0.16	-0.5
1,470,337	-		Psest_1360	0.16	+0.3
1,470,337	-		Psest_1360	0.16	+1.2
1,470,337	-		Psest_1360	0.16	+0.1