Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1226

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,332,253	+		Psest_1224	0.66	-0.7
1,332,253	+		Psest_1224	0.66	-1.0
1,332,253	+		Psest_1224	0.66	-1.8
1,332,253	+		Psest_1224	0.66	-0.1
1,332,253	+		Psest_1224	0.66	-0.4
1,332,253	+		Psest_1224	0.66	-1.3
1,332,253	+		Psest_1224	0.66	+0.4
1,332,253	+		Psest_1224	0.66	+0.0
1,332,253	+		Psest_1224	0.66	-0.3
1,332,253	+		Psest_1224	0.66	-0.4
1,332,254	-		Psest_1224	0.66	-0.6
1,332,254	-		Psest_1224	0.66	-0.0
1,332,254	-		Psest_1224	0.66	+1.8
1,332,254	-		Psest_1224	0.66	-0.5
1,332,254	-		Psest_1224	0.66	+1.8
1,332,254	-		Psest_1224	0.66	+1.1
1,332,280	+		Psest_1224	0.68	-0.8
1,332,310	+		Psest_1224	0.70	+0.2
1,332,310	+		Psest_1224	0.70	+0.1
1,332,310	+		Psest_1224	0.70	+0.3
1,332,311	-		Psest_1224	0.70	+1.4
1,332,311	-		Psest_1224	0.70	+0.8
1,332,311	-		Psest_1224	0.70	+0.4
1,332,336	+		Psest_1224	0.72	+0.4
1,332,336	+		Psest_1224	0.72	+0.2
1,332,336	+		Psest_1224	0.72	-0.3
1,332,337	-		Psest_1224	0.73	+0.1
1,332,337	-		Psest_1224	0.73	-0.5
1,332,337	-		Psest_1224	0.73	-0.1
1,332,374	-		Psest_1224	0.76	+1.0
1,332,412	-		Psest_1224	0.79	-1.1
1,332,542	-		Psest_1224	0.89	-0.1
1,332,555	+				+0.6
1,332,559	+				-0.4
1,332,560	-				+0.8
1,332,963	-				+0.7
1,333,050	+				+0.3
1,333,088	+				-0.2
1,333,088	+				+0.8
1,333,093	-				-0.0
1,333,093	-				+0.8
1,333,168	+		Psest_1226	0.22	+0.8
1,333,190	+		Psest_1226	0.33	-1.4
1,333,264	+		Psest_1226	0.72	+0.9
1,333,265	-		Psest_1226	0.72	-0.1
1,333,266	+		Psest_1226	0.73	+0.8
1,333,267	-		Psest_1226	0.73	+0.9
1,333,452	+		Psest_1227	0.11	+0.7
1,333,452	+		Psest_1227	0.11	+0.8
1,333,452	+		Psest_1227	0.11	+0.3
1,333,453	-		Psest_1227	0.11	-3.0
1,334,042	+		Psest_1227	0.70	+0.5
1,334,076	-		Psest_1227	0.74	-0.2
1,334,076	-		Psest_1227	0.74	-0.4