Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1082

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,170,104	+				+0.5
1,170,105	-				+0.8
1,170,105	-				+0.6
1,170,441	-		Psest_1081	0.27	-1.2
1,170,649	+		Psest_1081	0.61	+0.8
1,170,649	+		Psest_1081	0.61	-1.4
1,170,649	+		Psest_1081	0.61	+0.1
1,170,649	+		Psest_1081	0.61	-0.0
1,170,649	+		Psest_1081	0.61	-1.2
1,170,649	+		Psest_1081	0.61	+0.2
1,170,649	+		Psest_1081	0.61	-0.0
1,170,649	+		Psest_1081	0.61	-0.5
1,170,649	+		Psest_1081	0.61	-1.2
1,170,649	+		Psest_1081	0.61	-0.2
1,170,649	+		Psest_1081	0.61	+1.2
1,170,650	-		Psest_1081	0.61	-0.2
1,170,650	-		Psest_1081	0.61	-1.2
1,170,650	-		Psest_1081	0.61	+0.5
1,170,650	-		Psest_1081	0.61	-0.2
1,170,650	-		Psest_1081	0.61	-0.2
1,170,854	+				+0.8
1,170,854	+				+1.3
1,170,854	+				+0.0
1,170,854	+				-0.9
1,170,854	+				+0.5
1,170,854	+				-0.1
1,170,854	+				+1.4
1,170,854	+				-0.3
1,170,854	+				-1.0
1,170,854	+				+1.0
1,170,855	-				+0.8
1,170,855	-				-0.8
1,170,855	-				+0.0
1,170,855	-				-0.6
1,170,855	-				+1.0
1,170,855	-				+2.6
1,170,855	-				+1.2
1,170,855	-				-2.9
1,170,855	-				-1.1
1,170,855	-				+0.2
1,170,855	-				-2.4
1,170,855	-				+0.1
1,171,233	+		Psest_1082	0.43	+1.1
1,171,233	+		Psest_1082	0.43	+0.4
1,171,234	-		Psest_1082	0.43	-1.8
1,171,743	+				+0.0
1,171,743	+				-1.0
1,171,743	+				-0.5
1,171,744	-				+0.8
1,171,744	-				-1.0
1,171,744	-				+0.8
1,171,744	-				-0.8
1,171,744	-				+0.0
1,171,872	+				+0.1
1,171,875	+				+0.4
1,171,875	+				+0.2
1,171,876	-				-0.3
1,171,876	-				+0.0
1,171,897	-				-1.5
1,171,897	-				-0.8
1,171,897	-				-0.5
1,171,897	-				-0.5
1,171,897	-				-0.3
1,171,928	+		Psest_1083	0.12	+0.5
1,172,085	+		Psest_1083	0.21	+0.8
1,172,448	+		Psest_1083	0.44	-0.9
1,172,449	-		Psest_1083	0.44	+2.1
1,172,449	-		Psest_1083	0.44	-0.3
1,172,499	+		Psest_1083	0.47	-1.0
1,172,500	-		Psest_1083	0.47	-0.6