Strain Fitness in Shewanella amazonensis SB2B around Sama_2333

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,798,324	+		Sama_2332	0.25	-0.9
2,798,324	+		Sama_2332	0.25	-1.7
2,798,324	+		Sama_2332	0.25	+0.2
2,798,334	-		Sama_2332	0.26	-0.8
2,798,348	-		Sama_2332	0.27	-1.7
2,798,391	-		Sama_2332	0.31	-0.7
2,798,391	-		Sama_2332	0.31	+1.1
2,798,500	+		Sama_2332	0.40	+0.9
2,798,500	+		Sama_2332	0.40	-0.6
2,798,547	+		Sama_2332	0.44	-0.4
2,798,621	+		Sama_2332	0.50	-0.8
2,798,621	+		Sama_2332	0.50	-1.7
2,798,621	+		Sama_2332	0.50	-2.1
2,798,621	+		Sama_2332	0.50	-1.0
2,798,621	+		Sama_2332	0.50	-0.7
2,798,622	-		Sama_2332	0.50	-0.3
2,798,622	-		Sama_2332	0.50	-0.7
2,798,629	-		Sama_2332	0.51	-0.1
2,798,655	+		Sama_2332	0.53	-0.9
2,798,736	-		Sama_2332	0.60	-0.4
2,798,797	-		Sama_2332	0.65	+1.7
2,798,847	+		Sama_2332	0.70	-0.8
2,798,883	-		Sama_2332	0.73	-0.7
2,798,887	+		Sama_2332	0.73	-1.6
2,798,888	-		Sama_2332	0.73	+0.9
2,798,888	-		Sama_2332	0.73	+0.4
2,798,903	+		Sama_2332	0.74	-0.1
2,798,904	-		Sama_2332	0.74	-0.5
2,798,908	-		Sama_2332	0.75	-0.1
2,798,948	+		Sama_2332	0.78	+0.8
2,798,952	+		Sama_2332	0.79	-0.3
2,798,953	-		Sama_2332	0.79	+0.3
2,799,005	+		Sama_2332	0.83	+1.9
2,799,005	+		Sama_2332	0.83	+0.0
2,799,044	+		Sama_2332	0.86	-1.9
2,799,044	+		Sama_2332	0.86	-0.7
2,799,114	+				-0.4
2,799,160	-				+0.3
2,799,165	-				+0.4
2,799,165	-				+0.1
2,799,202	+				-1.5
2,799,231	+				-0.2
2,799,248	+				+0.2
2,799,249	-				+0.4
2,799,251	+				-0.7
2,799,302	-		Sama_2333	0.12	-0.7
2,799,310	-		Sama_2333	0.13	-0.5
2,799,310	-		Sama_2333	0.13	-0.5
2,799,427	-		Sama_2333	0.25	-0.5
2,799,459	-		Sama_2333	0.28	-0.3
2,799,507	+		Sama_2333	0.33	-1.4
2,799,532	-		Sama_2333	0.35	+0.8
2,799,568	-		Sama_2333	0.39	-0.3
2,799,705	-		Sama_2333	0.53	-1.2
2,799,765	-		Sama_2333	0.59	-1.4
2,799,898	+		Sama_2333	0.72	-1.2
2,799,940	+		Sama_2333	0.77	-0.2
2,799,941	-		Sama_2333	0.77	-0.7
2,799,941	-		Sama_2333	0.77	+0.2
2,800,028	-		Sama_2333	0.85	+1.7
2,800,031	+		Sama_2333	0.86	-0.1
2,800,060	+		Sama_2333	0.89	-1.1
2,800,077	+				+0.7
2,800,085	-				-0.1
2,800,089	+				+0.5
2,800,090	-				+1.1
2,800,096	+				-0.3
2,800,097	-				+0.1
2,800,132	-				+1.2
2,800,132	-				-0.4
2,800,299	+		Sama_2334	0.26	+0.0
2,800,303	-		Sama_2334	0.27	+1.2
2,800,344	+		Sama_2334	0.35	-0.1
2,800,370	+		Sama_2334	0.41	-0.3
2,800,370	+		Sama_2334	0.41	-0.6
2,800,371	-		Sama_2334	0.41	+0.1
2,800,372	+		Sama_2334	0.41	-0.7
2,800,372	+		Sama_2334	0.41	+0.2
2,800,374	+		Sama_2334	0.41	-0.4
2,800,374	+		Sama_2334	0.41	+0.3
2,800,374	+		Sama_2334	0.41	-0.6
2,800,374	+		Sama_2334	0.41	+0.5
2,800,374	+		Sama_2334	0.41	-0.2
2,800,375	-		Sama_2334	0.42	+0.5
2,800,382	-		Sama_2334	0.43	-0.4
2,800,414	+		Sama_2334	0.49	-0.6
2,800,414	+		Sama_2334	0.49	-0.2
2,800,490	+		Sama_2334	0.65	+0.2
2,800,542	+		Sama_2334	0.75	-1.2
2,800,567	-		Sama_2334	0.80	-0.8
2,800,699	+				-0.9
2,800,699	+				-1.4
2,800,699	+				+1.1
2,800,699	+				+0.9
2,800,700	-				+0.9
2,800,746	+				+0.9
2,800,746	+				-0.1
2,800,747	-				+0.2
2,800,747	-				-0.4
2,800,762	+				-0.1
2,800,762	+				-0.2
2,800,818	+		Sama_2335	0.15	+0.9
2,800,827	+		Sama_2335	0.16	-1.2
2,800,827	+		Sama_2335	0.16	+0.2
2,800,827	+		Sama_2335	0.16	+1.5
2,800,828	-		Sama_2335	0.16	+3.1
2,800,854	+		Sama_2335	0.19	+0.8
2,800,933	+		Sama_2335	0.26	-0.3
2,800,933	+		Sama_2335	0.26	-1.2
2,800,934	-		Sama_2335	0.26	-0.7
2,800,941	+		Sama_2335	0.27	-0.2
2,801,005	+		Sama_2335	0.33	-1.7
2,801,005	+		Sama_2335	0.33	-1.2
2,801,005	+		Sama_2335	0.33	-0.4
2,801,005	+		Sama_2335	0.33	+0.2
2,801,005	+		Sama_2335	0.33	+0.0
2,801,005	+		Sama_2335	0.33	-0.1
2,801,005	+		Sama_2335	0.33	-0.1
2,801,006	-		Sama_2335	0.33	-0.8
2,801,006	-		Sama_2335	0.33	-0.8
2,801,010	-		Sama_2335	0.33	-0.7
2,801,092	+		Sama_2335	0.41	-0.2
2,801,093	-		Sama_2335	0.41	-0.2
2,801,098	-		Sama_2335	0.42	-0.6
2,801,129	-		Sama_2335	0.44	+0.2
2,801,162	+		Sama_2335	0.48	-0.8
2,801,167	-		Sama_2335	0.48	+0.2
2,801,167	-		Sama_2335	0.48	+0.2