Strain Fitness in Shewanella amazonensis SB2B around Sama_1051

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,271,958	+				-0.9
1,271,958	+				-0.6
1,272,056	+				-0.1
1,272,056	+				-0.3
1,272,056	+				-0.1
1,272,056	+				+0.8
1,272,068	+				+0.4
1,272,068	+				-1.1
1,272,378	+				-0.1
1,272,381	+				+0.4
1,272,383	+				+0.3
1,272,383	+				+1.6
1,272,383	+				+0.2
1,272,383	+				-0.6
1,272,390	+				+0.0
1,272,390	+				+1.0
1,272,499	+				+1.3
1,272,499	+				-1.0
1,272,514	+				+0.9
1,272,556	+				-0.3
1,272,557	-				-0.4
1,272,565	-				+0.6
1,272,565	-				+0.2
1,272,566	+				+1.0
1,272,629	+				+1.2
1,272,699	-				+0.0
1,272,854	-				-0.2
1,272,921	+				-0.2
1,272,922	-				+0.8
1,273,008	+		Sama_1051	0.38	-1.0
1,273,028	-		Sama_1051	0.46	+0.2
1,273,074	+		Sama_1051	0.64	-0.5
1,273,083	+		Sama_1051	0.67	+0.0
1,273,084	-		Sama_1051	0.67	-0.5
1,273,134	-		Sama_1051	0.87	-0.1
1,273,141	+		Sama_1051	0.90	-1.1
1,273,142	-				-0.5
1,273,222	+				-0.1
1,273,222	+				-1.0
1,273,222	+				-0.9
1,273,222	+				+0.5
1,273,222	+				-0.5
1,273,223	-				-0.4
1,273,234	+				+0.3
1,273,235	-				+0.8
1,273,238	+				+0.7
1,273,284	+				+0.3
1,273,443	+		Sama_1052	0.15	+0.2
1,273,443	+		Sama_1052	0.15	-0.3
1,273,443	+		Sama_1052	0.15	+1.0
1,273,599	+		Sama_1052	0.24	+0.7
1,273,619	+		Sama_1052	0.25	+0.7
1,273,619	+		Sama_1052	0.25	+0.3
1,273,619	+		Sama_1052	0.25	-2.4
1,273,620	-		Sama_1052	0.25	+0.4
1,273,620	-		Sama_1052	0.25	+0.0
1,273,636	+		Sama_1052	0.26	+0.4
1,273,636	+		Sama_1052	0.26	+1.4
1,273,636	+		Sama_1052	0.26	-0.6
1,273,636	+		Sama_1052	0.26	-0.3
1,273,637	-		Sama_1052	0.26	+1.0
1,273,637	-		Sama_1052	0.26	+0.8
1,273,637	-		Sama_1052	0.26	-0.5
1,273,637	-		Sama_1052	0.26	+0.3
1,273,637	-		Sama_1052	0.26	+0.2
1,273,640	+		Sama_1052	0.26	-0.2
1,273,640	+		Sama_1052	0.26	-1.0
1,273,640	+		Sama_1052	0.26	-1.1
1,273,640	+		Sama_1052	0.26	-0.6
1,273,641	-		Sama_1052	0.27	+0.1
1,273,641	-		Sama_1052	0.27	+0.4
1,273,682	+		Sama_1052	0.29	-1.1
1,273,682	+		Sama_1052	0.29	+0.9
1,273,683	-		Sama_1052	0.29	-0.3
1,273,713	-		Sama_1052	0.30	+0.8
1,273,742	+		Sama_1052	0.32	-1.2
1,273,743	-		Sama_1052	0.32	-1.0
1,273,799	+		Sama_1052	0.35	+0.7
1,273,875	+		Sama_1052	0.40	+2.0
1,273,876	-		Sama_1052	0.40	+0.2
1,273,876	-		Sama_1052	0.40	+1.0
1,273,876	-		Sama_1052	0.40	+0.3
1,273,912	+		Sama_1052	0.42	+0.3
1,273,912	+		Sama_1052	0.42	+0.5
1,273,912	+		Sama_1052	0.42	+0.4
1,273,912	+		Sama_1052	0.42	+0.1
1,273,913	-		Sama_1052	0.42	+2.8
1,273,913	-		Sama_1052	0.42	+0.4
1,273,913	-		Sama_1052	0.42	-0.7
1,273,913	-		Sama_1052	0.42	+2.0
1,273,913	-		Sama_1052	0.42	+0.1
1,273,995	+		Sama_1052	0.46	-1.4
1,274,042	-		Sama_1052	0.49	-1.0
1,274,076	-		Sama_1052	0.51	+0.5
1,274,076	-		Sama_1052	0.51	-0.6
1,274,090	+		Sama_1052	0.51	+0.6