Strain Fitness in Shewanella amazonensis SB2B around Sama_0887

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,074,500	+		Sama_0886	0.30	-1.5
1,074,500	+		Sama_0886	0.30	-1.0
1,074,501	-		Sama_0886	0.30	+0.0
1,074,501	-		Sama_0886	0.30	+0.4
1,074,501	-		Sama_0886	0.30	+0.2
1,074,512	+		Sama_0886	0.31	-0.2
1,074,512	+		Sama_0886	0.31	-0.4
1,074,513	-		Sama_0886	0.31	-0.1
1,074,513	-		Sama_0886	0.31	-0.2
1,074,513	-		Sama_0886	0.31	+0.5
1,074,561	-		Sama_0886	0.35	+0.6
1,074,565	+		Sama_0886	0.35	-0.2
1,074,565	+		Sama_0886	0.35	-0.1
1,074,565	+		Sama_0886	0.35	+0.4
1,074,566	-		Sama_0886	0.36	-1.0
1,074,566	-		Sama_0886	0.36	+0.5
1,074,566	-		Sama_0886	0.36	-0.5
1,074,566	-		Sama_0886	0.36	+0.0
1,074,576	+		Sama_0886	0.36	+0.2
1,074,576	+		Sama_0886	0.36	+0.2
1,074,577	-		Sama_0886	0.36	+0.1
1,074,627	+		Sama_0886	0.40	-0.3
1,074,628	-		Sama_0886	0.40	-0.0
1,074,647	+		Sama_0886	0.42	+0.4
1,074,648	-		Sama_0886	0.42	+0.7
1,074,655	-		Sama_0886	0.42	+0.8
1,074,666	+		Sama_0886	0.43	-1.7
1,074,667	-		Sama_0886	0.43	+0.2
1,074,667	-		Sama_0886	0.43	+0.5
1,074,667	-		Sama_0886	0.43	-0.3
1,074,680	-		Sama_0886	0.44	-0.7
1,074,681	+		Sama_0886	0.44	-0.2
1,074,681	+		Sama_0886	0.44	-1.3
1,074,814	-		Sama_0886	0.55	+0.4
1,074,867	+		Sama_0886	0.59	-0.9
1,074,930	-		Sama_0886	0.64	+0.6
1,074,930	-		Sama_0886	0.64	+0.2
1,074,930	-		Sama_0886	0.64	+0.4
1,074,956	+		Sama_0886	0.66	+1.3
1,074,957	-		Sama_0886	0.66	+0.4
1,074,957	-		Sama_0886	0.66	-0.2
1,074,957	-		Sama_0886	0.66	+0.7
1,074,985	-		Sama_0886	0.68	-0.5
1,075,001	+		Sama_0886	0.69	-0.2
1,075,001	+		Sama_0886	0.69	+0.3
1,075,001	+		Sama_0886	0.69	-0.1
1,075,001	+		Sama_0886	0.69	-0.2
1,075,001	+		Sama_0886	0.69	-0.3
1,075,001	+		Sama_0886	0.69	-0.6
1,075,002	-		Sama_0886	0.69	+1.1
1,075,002	-		Sama_0886	0.69	-0.7
1,075,021	+		Sama_0886	0.71	-0.9
1,075,077	+		Sama_0886	0.75	+0.7
1,075,078	-		Sama_0886	0.75	-0.0
1,075,086	+		Sama_0886	0.76	-0.9
1,075,087	-		Sama_0886	0.76	-0.0
1,075,143	-		Sama_0886	0.80	-1.8
1,075,143	-		Sama_0886	0.80	-0.1
1,075,148	+		Sama_0886	0.81	+0.5
1,075,148	+		Sama_0886	0.81	-0.3
1,075,149	-		Sama_0886	0.81	+0.1
1,075,190	+		Sama_0886	0.84	+0.2
1,075,191	-		Sama_0886	0.84	+1.1
1,075,203	-		Sama_0886	0.85	-0.6
1,075,333	+				+0.1
1,075,350	+				+1.2
1,075,351	-				+0.4
1,075,351	-				+0.5
1,075,351	-				-0.8
1,075,356	+				-0.2
1,075,357	-				+0.0
1,075,357	-				-0.2
1,075,357	-				-0.3
1,075,412	-				-0.8
1,075,426	+				+0.3
1,075,427	-				-0.3
1,075,427	-				-2.2
1,075,427	-				+0.7
1,075,427	-				-0.2
1,075,427	-				-0.4
1,075,427	-				+1.0
1,075,427	-				+0.9
1,075,427	-				+0.1
1,075,430	+				+0.6
1,075,431	-				+1.1
1,075,431	-				+0.0
1,075,431	-				+0.3
1,075,431	-				-0.5
1,075,431	-				-0.5
1,075,431	-				-0.5
1,075,434	+				+0.6
1,075,435	-				+0.8
1,075,445	+				-0.1
1,075,493	+				-0.5
1,075,494	-				+1.1
1,075,494	-				-0.3
1,075,856	+		Sama_0887	0.46	+0.5
1,075,967	-		Sama_0887	0.60	-0.5
1,075,997	+		Sama_0887	0.64	-2.2
1,076,000	-		Sama_0887	0.64	-1.9
1,076,000	-		Sama_0887	0.64	-0.5
1,076,000	-		Sama_0887	0.64	-1.2
1,076,153	-		Sama_0887	0.84	-0.5
1,076,241	+				-1.2
1,076,285	+				-0.5
1,076,350	-				-0.7
1,076,355	-				+0.8
1,076,387	-				+0.9
1,076,387	-				+0.3
1,076,387	-				-0.1
1,076,417	+				-1.6
1,076,426	+				-0.1
1,076,427	-				+0.9
1,076,446	+				-0.5
1,076,447	-				+1.5
1,076,464	+				-1.5
1,076,464	+				+0.0
1,076,465	-				-1.4
1,076,470	-				+0.5