Strain Fitness in Shewanella amazonensis SB2B around Sama_2063
Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 5 vol% |
---|---|---|---|---|---|
remove | |||||
2,499,063 | + | -0.6 | |||
2,499,143 | + | Sama_2063 | 0.11 | -0.4 | |
2,499,143 | + | Sama_2063 | 0.11 | +0.3 | |
2,499,143 | + | Sama_2063 | 0.11 | -2.0 | |
2,499,143 | + | Sama_2063 | 0.11 | -2.9 | |
2,499,143 | + | Sama_2063 | 0.11 | -0.1 | |
2,499,143 | + | Sama_2063 | 0.11 | -0.8 | |
2,499,143 | + | Sama_2063 | 0.11 | -0.9 | |
2,499,143 | + | Sama_2063 | 0.11 | -0.5 | |
2,499,202 | + | Sama_2063 | 0.20 | -2.1 | |
2,499,202 | + | Sama_2063 | 0.20 | -2.5 | |
2,499,202 | + | Sama_2063 | 0.20 | -1.0 | |
2,499,236 | + | Sama_2063 | 0.26 | -0.3 | |
2,499,236 | + | Sama_2063 | 0.26 | -0.3 | |
2,499,326 | + | Sama_2063 | 0.40 | -0.6 | |
2,499,370 | + | Sama_2063 | 0.48 | -0.9 | |
2,499,472 | + | Sama_2063 | 0.64 | -0.5 | |
2,499,472 | + | Sama_2063 | 0.64 | -0.2 | |
2,499,484 | + | Sama_2063 | 0.66 | -0.1 | |
2,499,552 | + | Sama_2063 | 0.77 | +1.7 | |
2,499,687 | + | -0.5 | |||
2,499,689 | + | -2.0 |
Or see this region's nucleotide sequence