Strain Fitness in Shewanella amazonensis SB2B around Sama_1938

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,364,343	-		Sama_1936	0.72	+0.4
2,364,344	+		Sama_1936	0.72	-0.7
2,364,345	-		Sama_1936	0.72	-0.5
2,364,392	-		Sama_1936	0.78	-0.3
2,364,392	-		Sama_1936	0.78	+0.3
2,364,428	+		Sama_1936	0.82	+0.4
2,364,429	-		Sama_1936	0.82	+0.1
2,364,457	-		Sama_1936	0.86	+0.3
2,364,527	-				-0.9
2,364,527	-				-0.7
2,364,572	+				-0.4
2,364,582	+				+0.2
2,364,583	-				-0.8
2,364,588	-				-0.8
2,364,590	+				-1.5
2,364,590	+				-0.1
2,364,593	+				+0.7
2,364,594	-				-0.2
2,364,604	-				+0.8
2,364,609	-				-2.1
2,364,801	-		Sama_1937	0.23	-0.1
2,364,801	-		Sama_1937	0.23	-0.5
2,364,810	+		Sama_1937	0.24	+0.3
2,364,810	+		Sama_1937	0.24	+1.5
2,364,814	-		Sama_1937	0.24	-0.9
2,364,832	+		Sama_1937	0.27	+1.3
2,364,851	-		Sama_1937	0.30	+0.7
2,364,902	-		Sama_1937	0.37	+0.5
2,365,027	-		Sama_1937	0.54	-0.1
2,365,147	+		Sama_1937	0.71	+0.0
2,365,148	-		Sama_1937	0.71	+0.7
2,365,239	+		Sama_1937	0.84	+1.1
2,365,239	+		Sama_1937	0.84	-1.0
2,365,239	+		Sama_1937	0.84	-0.7
2,365,239	+		Sama_1937	0.84	+1.1
2,365,242	-		Sama_1937	0.85	-0.5
2,365,249	-		Sama_1937	0.86	+0.9
2,365,249	-		Sama_1937	0.86	-0.6
2,365,279	+		Sama_1937	0.90	+0.2
2,365,280	-				+0.4
2,365,304	-				-0.3
2,365,304	-				+1.3
2,365,324	+				-1.9
2,365,350	+				+1.5
2,365,358	+				-0.5
2,365,358	+				+0.2
2,365,359	-				+0.8
2,365,359	-				-0.1
2,365,414	-		Sama_1938	0.24	-0.4
2,365,453	-		Sama_1938	0.37	-0.1
2,365,457	-		Sama_1938	0.39	-1.0
2,365,589	+		Sama_1938	0.84	+0.1
2,365,690	-				-0.8
2,366,383	-				+1.5
2,366,419	-				+0.3
2,366,419	-				+1.0
2,366,419	-				-0.1
2,366,492	-				+0.4
2,366,572	-				+0.5
2,366,636	-				-0.0