Strain Fitness in Shewanella amazonensis SB2B around Sama_1852

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,255,304	-		Sama_1851	0.38	-2.0
2,255,378	+		Sama_1851	0.44	-0.3
2,255,394	+		Sama_1851	0.45	-1.1
2,255,395	-		Sama_1851	0.45	-0.3
2,255,395	-		Sama_1851	0.45	-0.5
2,255,452	+		Sama_1851	0.50	+0.5
2,255,452	+		Sama_1851	0.50	+0.2
2,255,452	+		Sama_1851	0.50	-1.3
2,255,452	+		Sama_1851	0.50	-1.8
2,255,452	+		Sama_1851	0.50	+0.4
2,255,452	+		Sama_1851	0.50	-0.2
2,255,452	+		Sama_1851	0.50	+0.2
2,255,458	+		Sama_1851	0.51	+0.6
2,255,488	+		Sama_1851	0.53	+0.4
2,255,488	+		Sama_1851	0.53	-0.6
2,255,515	-		Sama_1851	0.56	-1.1
2,255,525	-		Sama_1851	0.57	-1.1
2,255,597	+		Sama_1851	0.63	+0.5
2,255,598	-		Sama_1851	0.63	-0.2
2,255,598	-		Sama_1851	0.63	-1.6
2,255,662	+		Sama_1851	0.68	-1.0
2,255,773	-		Sama_1851	0.78	-0.1
2,255,792	+		Sama_1851	0.80	-0.5
2,255,792	+		Sama_1851	0.80	-0.9
2,255,792	+		Sama_1851	0.80	+1.9
2,255,909	+		Sama_1851	0.90	-0.8
2,255,909	+		Sama_1851	0.90	-0.2
2,255,923	+				-0.9
2,255,924	-				-1.1
2,255,924	-				-0.1
2,256,018	-				-1.0
2,256,037	+				-0.4
2,256,056	+				-0.3
2,256,056	+				-0.7
2,256,056	+				-0.1
2,256,057	-				-0.1
2,256,070	-				-1.4
2,256,104	+				-0.5
2,256,105	-				-0.1
2,256,121	-				-0.5
2,256,202	-				-0.9
2,256,230	+				-0.1
2,256,230	+				+0.6
2,256,230	+				-0.3
2,256,230	+				+0.3
2,256,231	-				-0.3
2,256,233	+				-0.3
2,256,253	+				+0.3
2,256,254	-				+0.9
2,256,260	+				+0.2
2,256,314	-				-0.1
2,256,441	+		Sama_1852	0.20	-2.1
2,256,463	+		Sama_1852	0.22	-0.4
2,256,463	+		Sama_1852	0.22	+0.9
2,256,463	+		Sama_1852	0.22	+0.6
2,256,464	-		Sama_1852	0.22	+0.5
2,256,483	+		Sama_1852	0.25	-0.1
2,256,559	+		Sama_1852	0.33	+0.9
2,256,559	+		Sama_1852	0.33	-0.1
2,256,560	-		Sama_1852	0.33	+0.7
2,256,572	+		Sama_1852	0.34	+0.2
2,256,573	-		Sama_1852	0.34	+1.1
2,256,577	-		Sama_1852	0.35	+0.4
2,256,577	-		Sama_1852	0.35	+0.2
2,256,588	-		Sama_1852	0.36	-0.2
2,256,701	+		Sama_1852	0.49	-0.3
2,256,702	-		Sama_1852	0.49	-2.4
2,256,772	+		Sama_1852	0.56	-0.2
2,256,881	+		Sama_1852	0.68	+0.5
2,256,926	+		Sama_1852	0.73	-1.3
2,257,032	+		Sama_1852	0.85	+0.1
2,257,032	+		Sama_1852	0.85	-0.9
2,257,067	+		Sama_1852	0.89	+0.5
2,257,068	-		Sama_1852	0.89	+1.5
2,257,068	-		Sama_1852	0.89	+0.3
2,257,145	+				-0.3
2,257,181	+				+0.3
2,257,184	+				+0.1
2,257,184	+				-0.5
2,257,184	+				-0.8
2,257,184	+				+0.9
2,257,185	-				-1.1
2,257,234	+				-1.4
2,257,234	+				+0.3
2,257,265	+				-0.8
2,257,266	-				-0.7
2,257,266	-				-0.1
2,257,266	-				+0.3
2,257,306	+				+0.2
2,257,356	+		Sama_1853	0.12	-0.1
2,257,357	-		Sama_1853	0.12	-0.3
2,257,357	-		Sama_1853	0.12	+0.3
2,257,357	-		Sama_1853	0.12	+0.3
2,257,448	+		Sama_1853	0.17	-0.1
2,257,448	+		Sama_1853	0.17	-0.7
2,257,451	+		Sama_1853	0.17	-1.4
2,257,451	+		Sama_1853	0.17	+0.4
2,257,451	+		Sama_1853	0.17	-0.3
2,257,514	+		Sama_1853	0.20	-0.4
2,257,735	+		Sama_1853	0.33	-0.3
2,257,736	-		Sama_1853	0.33	-0.1
2,257,736	-		Sama_1853	0.33	-0.1
2,257,736	-		Sama_1853	0.33	+0.4
2,257,736	-		Sama_1853	0.33	-0.2
2,257,736	-		Sama_1853	0.33	-1.1
2,257,737	+		Sama_1853	0.33	+0.9
2,257,737	+		Sama_1853	0.33	+0.2
2,257,738	-		Sama_1853	0.33	+0.1
2,257,738	-		Sama_1853	0.33	+0.5
2,257,820	-		Sama_1853	0.38	+0.4
2,257,820	-		Sama_1853	0.38	-0.1
2,257,827	-		Sama_1853	0.38	+0.1
2,257,847	-		Sama_1853	0.39	+0.1
2,257,968	+		Sama_1853	0.46	-0.8