Strain Fitness in Shewanella amazonensis SB2B around Sama_1468

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
1,775,906	+		Sama_1466	0.31	+0.8
1,775,906	+		Sama_1466	0.31	+0.6
1,775,906	+		Sama_1466	0.31	+0.6
1,775,909	+		Sama_1466	0.32	+1.0
1,775,909	+		Sama_1466	0.32	-0.3
1,775,978	-		Sama_1466	0.49	-1.0
1,776,017	+		Sama_1466	0.58	-0.6
1,776,018	-		Sama_1466	0.58	+1.0
1,776,018	-		Sama_1466	0.58	-0.1
1,776,018	-		Sama_1466	0.58	-0.4
1,776,069	+		Sama_1466	0.71	-0.0
1,776,100	+		Sama_1466	0.78	-0.0
1,776,167	+				-0.4
1,776,168	-				+1.6
1,776,188	+				+2.1
1,776,188	+				-0.8
1,776,188	+				-0.3
1,776,188	+				-0.1
1,776,188	+				-1.0
1,776,188	+				+0.1
1,776,189	-				-0.6
1,776,189	-				+0.0
1,776,189	-				-2.3
1,776,237	-				+1.4
1,776,256	+				+1.0
1,776,257	-				-1.6
1,776,273	+				+1.9
1,776,274	-				-0.6
1,776,274	-				-0.0
1,776,274	-				+0.2
1,776,276	-				-0.0
1,776,281	+				+0.1
1,776,282	-				+0.2
1,776,360	+				-0.4
1,776,360	+				-0.0
1,776,361	-				-1.6
1,776,379	+				-0.8
1,776,380	-				-0.2
1,776,385	+				-0.0
1,776,385	+				+0.2
1,776,385	+				-0.3
1,776,385	+				-1.2
1,776,386	-				-0.6
1,776,386	-				-0.3
1,776,386	-				-1.3
1,776,394	+				-0.1
1,776,395	-				+0.4
1,776,422	+				+0.5
1,776,423	-				+1.0
1,776,451	+		Sama_1467	0.11	+1.0
1,776,451	+		Sama_1467	0.11	-0.7
1,776,452	-		Sama_1467	0.11	-0.3
1,776,452	-		Sama_1467	0.11	-0.6
1,776,452	-		Sama_1467	0.11	-0.8
1,776,452	-		Sama_1467	0.11	-0.7
1,776,512	+		Sama_1467	0.27	+0.3
1,776,557	+		Sama_1467	0.39	-0.7
1,776,579	+		Sama_1467	0.45	+0.1
1,776,787	+				-0.5
1,776,825	+				-0.1
1,776,827	+				-0.0
1,776,853	+				+0.2
1,776,876	+				-0.4
1,776,876	+				-0.0
1,776,876	+				+0.1
1,776,877	-				+0.5
1,776,883	+				-0.3
1,776,908	+				-0.5
1,776,909	-				+0.6
1,777,081	+		Sama_1468	0.26	-0.6
1,777,081	+		Sama_1468	0.26	-0.6
1,777,081	+		Sama_1468	0.26	-1.2
1,777,081	+		Sama_1468	0.26	-0.6
1,777,089	+		Sama_1468	0.28	-0.5
1,777,191	-		Sama_1468	0.42	+0.2
1,777,208	+		Sama_1468	0.45	-0.8
1,777,208	+		Sama_1468	0.45	+0.3
1,777,208	+		Sama_1468	0.45	-0.4
1,777,208	+		Sama_1468	0.45	-0.3
1,777,209	-		Sama_1468	0.45	-0.3
1,777,460	+		Sama_1468	0.81	+0.8
1,777,461	-		Sama_1468	0.81	-1.5
1,777,475	+		Sama_1468	0.83	-0.0
1,777,475	+		Sama_1468	0.83	-0.4
1,777,475	+		Sama_1468	0.83	-0.3
1,777,475	+		Sama_1468	0.83	+0.2
1,777,476	-		Sama_1468	0.83	-0.5
1,777,607	-				+0.1
1,777,607	-				-0.3
1,777,623	+				-0.2
1,777,812	+		Sama_1469	0.23	-0.1
1,777,812	+		Sama_1469	0.23	-0.0
1,777,813	-		Sama_1469	0.23	+0.0
1,777,813	-		Sama_1469	0.23	+0.8
1,777,813	-		Sama_1469	0.23	+0.2
1,777,848	+		Sama_1469	0.27	-0.1
1,777,849	-		Sama_1469	0.27	-0.7
1,777,849	-		Sama_1469	0.27	-0.2
1,777,849	-		Sama_1469	0.27	-1.0
1,777,878	+		Sama_1469	0.30	-1.1
1,777,905	+		Sama_1469	0.33	+0.2
1,777,905	+		Sama_1469	0.33	-0.3
1,777,906	-		Sama_1469	0.33	+0.2
1,777,906	-		Sama_1469	0.33	-0.9
1,777,906	-		Sama_1469	0.33	-0.4
1,778,003	+		Sama_1469	0.43	+0.1
1,778,003	+		Sama_1469	0.43	+0.8
1,778,003	+		Sama_1469	0.43	+0.7
1,778,003	+		Sama_1469	0.43	-0.8
1,778,003	+		Sama_1469	0.43	-0.6
1,778,004	-		Sama_1469	0.43	+0.2
1,778,004	-		Sama_1469	0.43	-0.1
1,778,004	-		Sama_1469	0.43	-0.2
1,778,007	+		Sama_1469	0.43	-1.2
1,778,008	-		Sama_1469	0.43	-0.0
1,778,021	+		Sama_1469	0.45	+0.4
1,778,022	-		Sama_1469	0.45	-0.5
1,778,022	-		Sama_1469	0.45	-0.1
1,778,056	+		Sama_1469	0.48	+0.7
1,778,143	+		Sama_1469	0.57	+0.1
1,778,252	+		Sama_1469	0.68	+1.8
1,778,266	+		Sama_1469	0.70	+0.4
1,778,266	+		Sama_1469	0.70	-0.2
1,778,267	-		Sama_1469	0.70	-1.0
1,778,296	+		Sama_1469	0.73	-0.2
1,778,297	-		Sama_1469	0.73	-1.8
1,778,297	-		Sama_1469	0.73	-0.0
1,778,316	+		Sama_1469	0.75	-0.0
1,778,354	-		Sama_1469	0.79	-1.8
1,778,354	-		Sama_1469	0.79	+0.6
1,778,376	+		Sama_1469	0.81	+0.7
1,778,376	+		Sama_1469	0.81	-1.2
1,778,376	+		Sama_1469	0.81	+0.6
1,778,431	+		Sama_1469	0.86	+1.0
1,778,431	+		Sama_1469	0.86	+0.8
1,778,431	+		Sama_1469	0.86	+1.0
1,778,432	-		Sama_1469	0.87	-0.0
1,778,433	+		Sama_1469	0.87	+0.4
1,778,433	+		Sama_1469	0.87	-0.3
1,778,433	+		Sama_1469	0.87	+2.4
1,778,434	-		Sama_1469	0.87	+0.2
1,778,434	-		Sama_1469	0.87	+1.7
1,778,434	-		Sama_1469	0.87	+0.8
1,778,434	-		Sama_1469	0.87	+0.6
1,778,434	-		Sama_1469	0.87	-0.5
1,778,434	-		Sama_1469	0.87	-0.7
1,778,434	-		Sama_1469	0.87	+0.7
1,778,434	-		Sama_1469	0.87	-0.3
1,778,506	+				+0.1
1,778,506	+				+1.7
1,778,507	-				-0.0
1,778,553	+				-0.8
1,778,553	+				-0.0
1,778,553	+				+0.2
1,778,553	+				-0.9
1,778,554	-				-0.3
1,778,554	-				+0.4