Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0136 and Sama_0137 are separated by 25 nucleotides Sama_0137 and Sama_0138 are separated by 5 nucleotides
Sama_0136: Sama_0136 - putative metal dependent phosphohydrolase (RefSeq), at 152,768 to 153,964
_0136
Sama_0137: Sama_0137 - molybdopterin biosynthesis protein MoeB (RefSeq), at 153,990 to 154,754
_0137
Sama_0138: Sama_0138 - molybdopterin biosynthesis MoeA protein (RefSeq), at 154,760 to 156,001
_0138
Position (kb) 153
154
155 Strain fitness (log2 ratio) -2
-1
0
1
2 at 153.101 kb on - strand, within Sama_0136 at 153.101 kb on - strand, within Sama_0136 at 153.101 kb on - strand, within Sama_0136 at 153.111 kb on + strand, within Sama_0136 at 153.111 kb on + strand, within Sama_0136 at 153.111 kb on + strand, within Sama_0136 at 153.111 kb on + strand, within Sama_0136 at 153.111 kb on + strand, within Sama_0136 at 153.112 kb on - strand, within Sama_0136 at 153.112 kb on - strand, within Sama_0136 at 153.112 kb on - strand, within Sama_0136 at 153.112 kb on - strand, within Sama_0136 at 153.112 kb on - strand, within Sama_0136 at 153.112 kb on - strand, within Sama_0136 at 153.112 kb on - strand, within Sama_0136 at 153.147 kb on + strand, within Sama_0136 at 153.147 kb on + strand, within Sama_0136 at 153.175 kb on + strand, within Sama_0136 at 153.175 kb on + strand, within Sama_0136 at 153.175 kb on + strand, within Sama_0136 at 153.175 kb on + strand, within Sama_0136 at 153.176 kb on - strand, within Sama_0136 at 153.176 kb on - strand, within Sama_0136 at 153.176 kb on - strand, within Sama_0136 at 153.176 kb on - strand, within Sama_0136 at 153.246 kb on - strand, within Sama_0136 at 153.246 kb on - strand, within Sama_0136 at 153.270 kb on + strand, within Sama_0136 at 153.270 kb on + strand, within Sama_0136 at 153.270 kb on + strand, within Sama_0136 at 153.271 kb on - strand, within Sama_0136 at 153.299 kb on + strand, within Sama_0136 at 153.299 kb on + strand, within Sama_0136 at 153.299 kb on + strand, within Sama_0136 at 153.299 kb on + strand, within Sama_0136 at 153.300 kb on - strand, within Sama_0136 at 153.300 kb on - strand, within Sama_0136 at 153.324 kb on + strand, within Sama_0136 at 153.360 kb on + strand, within Sama_0136 at 153.361 kb on - strand, within Sama_0136 at 153.361 kb on - strand, within Sama_0136 at 153.364 kb on + strand, within Sama_0136 at 153.364 kb on + strand, within Sama_0136 at 153.364 kb on + strand, within Sama_0136 at 153.365 kb on - strand, within Sama_0136 at 153.379 kb on + strand, within Sama_0136 at 153.380 kb on - strand, within Sama_0136 at 153.395 kb on - strand, within Sama_0136 at 153.449 kb on + strand, within Sama_0136 at 153.449 kb on + strand, within Sama_0136 at 153.463 kb on + strand, within Sama_0136 at 153.463 kb on + strand, within Sama_0136 at 153.463 kb on + strand, within Sama_0136 at 153.463 kb on + strand, within Sama_0136 at 153.463 kb on + strand, within Sama_0136 at 153.463 kb on + strand, within Sama_0136 at 153.463 kb on + strand, within Sama_0136 at 153.463 kb on + strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.464 kb on - strand, within Sama_0136 at 153.504 kb on + strand, within Sama_0136 at 153.504 kb on + strand, within Sama_0136 at 153.504 kb on + strand, within Sama_0136 at 153.504 kb on + strand, within Sama_0136 at 153.504 kb on + strand, within Sama_0136 at 153.504 kb on + strand, within Sama_0136 at 153.505 kb on - strand, within Sama_0136 at 153.505 kb on - strand, within Sama_0136 at 153.505 kb on - strand, within Sama_0136 at 153.505 kb on - strand, within Sama_0136 at 153.505 kb on - strand, within Sama_0136 at 153.595 kb on + strand, within Sama_0136 at 153.604 kb on + strand, within Sama_0136 at 153.635 kb on + strand, within Sama_0136 at 153.635 kb on + strand, within Sama_0136 at 153.635 kb on + strand, within Sama_0136 at 153.635 kb on + strand, within Sama_0136 at 153.636 kb on - strand, within Sama_0136 at 153.636 kb on - strand, within Sama_0136 at 153.668 kb on - strand, within Sama_0136 at 153.668 kb on - strand, within Sama_0136 at 153.668 kb on - strand, within Sama_0136 at 153.716 kb on + strand, within Sama_0136 at 153.724 kb on + strand, within Sama_0136 at 153.733 kb on + strand, within Sama_0136 at 153.733 kb on + strand, within Sama_0136 at 153.743 kb on + strand, within Sama_0136 at 153.744 kb on - strand, within Sama_0136 at 153.843 kb on - strand, within Sama_0136 at 153.909 kb on + strand at 153.910 kb on - strand at 153.910 kb on - strand at 153.910 kb on - strand at 153.910 kb on - strand at 153.910 kb on - strand at 153.910 kb on - strand at 153.942 kb on + strand at 153.942 kb on + strand at 153.943 kb on - strand at 153.943 kb on - strand at 153.959 kb on + strand at 153.959 kb on + strand at 153.959 kb on + strand at 153.991 kb on + strand at 153.991 kb on + strand at 153.992 kb on - strand at 153.992 kb on - strand at 154.038 kb on + strand at 154.038 kb on + strand at 154.121 kb on + strand, within Sama_0137 at 154.122 kb on - strand, within Sama_0137 at 154.122 kb on - strand, within Sama_0137 at 154.122 kb on - strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.140 kb on + strand, within Sama_0137 at 154.141 kb on - strand, within Sama_0137 at 154.141 kb on - strand, within Sama_0137 at 154.141 kb on - strand, within Sama_0137 at 154.141 kb on - strand, within Sama_0137 at 154.141 kb on - strand, within Sama_0137 at 154.175 kb on + strand, within Sama_0137 at 154.176 kb on - strand, within Sama_0137 at 154.231 kb on + strand, within Sama_0137 at 154.231 kb on + strand, within Sama_0137 at 154.231 kb on + strand, within Sama_0137 at 154.232 kb on - strand, within Sama_0137 at 154.232 kb on - strand, within Sama_0137 at 154.253 kb on - strand, within Sama_0137 at 154.253 kb on - strand, within Sama_0137 at 154.253 kb on - strand, within Sama_0137 at 154.253 kb on - strand, within Sama_0137 at 154.253 kb on - strand, within Sama_0137 at 154.265 kb on + strand, within Sama_0137 at 154.308 kb on + strand, within Sama_0137 at 154.308 kb on + strand, within Sama_0137 at 154.308 kb on + strand, within Sama_0137 at 154.308 kb on + strand, within Sama_0137 at 154.309 kb on - strand, within Sama_0137 at 154.309 kb on - strand, within Sama_0137 at 154.309 kb on - strand, within Sama_0137 at 154.313 kb on + strand, within Sama_0137 at 154.314 kb on - strand, within Sama_0137 at 154.314 kb on - strand, within Sama_0137 at 154.314 kb on - strand, within Sama_0137 at 154.440 kb on + strand, within Sama_0137 at 154.441 kb on - strand, within Sama_0137 at 154.457 kb on + strand, within Sama_0137 at 154.458 kb on - strand, within Sama_0137 at 154.458 kb on - strand, within Sama_0137 at 154.458 kb on - strand, within Sama_0137 at 154.521 kb on + strand, within Sama_0137 at 154.521 kb on + strand, within Sama_0137 at 154.604 kb on - strand, within Sama_0137 at 154.604 kb on - strand, within Sama_0137 at 154.604 kb on - strand, within Sama_0137 at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.680 kb on + strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.681 kb on - strand at 154.683 kb on - strand at 154.683 kb on - strand at 154.714 kb on + strand at 154.714 kb on + strand at 154.714 kb on + strand at 154.715 kb on - strand at 154.715 kb on - strand at 154.720 kb on - strand at 154.740 kb on + strand at 154.740 kb on + strand at 154.740 kb on + strand at 154.740 kb on + strand at 154.740 kb on + strand at 154.741 kb on - strand at 154.741 kb on - strand at 154.741 kb on - strand at 154.762 kb on - strand at 154.774 kb on + strand at 154.774 kb on + strand at 154.795 kb on + strand at 154.795 kb on + strand at 154.795 kb on + strand at 154.795 kb on + strand at 154.795 kb on + strand at 154.795 kb on + strand at 154.841 kb on - strand at 154.873 kb on + strand at 154.873 kb on + strand at 154.873 kb on + strand at 154.873 kb on + strand at 154.874 kb on - strand at 154.874 kb on - strand at 154.874 kb on - strand at 154.874 kb on - strand at 154.874 kb on - strand at 154.930 kb on + strand, within Sama_0138 at 154.932 kb on - strand, within Sama_0138 at 154.932 kb on - strand, within Sama_0138 at 154.932 kb on - strand, within Sama_0138 at 155.041 kb on + strand, within Sama_0138 at 155.042 kb on - strand, within Sama_0138 at 155.042 kb on - strand, within Sama_0138 at 155.042 kb on - strand, within Sama_0138 at 155.364 kb on + strand, within Sama_0138 at 155.364 kb on + strand, within Sama_0138 at 155.365 kb on - strand, within Sama_0138 at 155.365 kb on - strand, within Sama_0138 at 155.380 kb on - strand, within Sama_0138 at 155.380 kb on - strand, within Sama_0138 at 155.462 kb on + strand, within Sama_0138 at 155.462 kb on + strand, within Sama_0138 at 155.463 kb on - strand, within Sama_0138 at 155.463 kb on - strand, within Sama_0138 at 155.522 kb on + strand, within Sama_0138 at 155.522 kb on + strand, within Sama_0138 at 155.522 kb on + strand, within Sama_0138 at 155.522 kb on + strand, within Sama_0138 at 155.522 kb on + strand, within Sama_0138 at 155.523 kb on - strand, within Sama_0138 at 155.523 kb on - strand, within Sama_0138 at 155.523 kb on - strand, within Sama_0138 at 155.523 kb on - strand, within Sama_0138 at 155.554 kb on + strand, within Sama_0138 at 155.554 kb on + strand, within Sama_0138 at 155.554 kb on + strand, within Sama_0138 at 155.555 kb on - strand, within Sama_0138 at 155.555 kb on - strand, within Sama_0138 at 155.608 kb on + strand, within Sama_0138 at 155.609 kb on - strand, within Sama_0138 at 155.726 kb on - strand, within Sama_0138
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 153,101 - Sama_0136 0.28 -0.3 153,101 - Sama_0136 0.28 +0.2 153,101 - Sama_0136 0.28 +0.4 153,111 + Sama_0136 0.29 +1.5 153,111 + Sama_0136 0.29 +0.4 153,111 + Sama_0136 0.29 -0.2 153,111 + Sama_0136 0.29 -0.5 153,111 + Sama_0136 0.29 -0.4 153,112 - Sama_0136 0.29 -1.2 153,112 - Sama_0136 0.29 -0.1 153,112 - Sama_0136 0.29 -0.9 153,112 - Sama_0136 0.29 +1.1 153,112 - Sama_0136 0.29 +0.4 153,112 - Sama_0136 0.29 -0.6 153,112 - Sama_0136 0.29 -0.5 153,147 + Sama_0136 0.32 +0.2 153,147 + Sama_0136 0.32 -0.7 153,175 + Sama_0136 0.34 +0.8 153,175 + Sama_0136 0.34 +0.7 153,175 + Sama_0136 0.34 -0.1 153,175 + Sama_0136 0.34 -0.2 153,176 - Sama_0136 0.34 -0.3 153,176 - Sama_0136 0.34 +0.7 153,176 - Sama_0136 0.34 -0.2 153,176 - Sama_0136 0.34 +0.7 153,246 - Sama_0136 0.40 +0.6 153,246 - Sama_0136 0.40 -0.4 153,270 + Sama_0136 0.42 +0.2 153,270 + Sama_0136 0.42 -0.4 153,270 + Sama_0136 0.42 +0.0 153,271 - Sama_0136 0.42 -1.3 153,299 + Sama_0136 0.44 +0.1 153,299 + Sama_0136 0.44 -0.2 153,299 + Sama_0136 0.44 +0.0 153,299 + Sama_0136 0.44 +0.8 153,300 - Sama_0136 0.44 -0.7 153,300 - Sama_0136 0.44 -0.2 153,324 + Sama_0136 0.46 +0.8 153,360 + Sama_0136 0.49 -1.8 153,361 - Sama_0136 0.50 -0.6 153,361 - Sama_0136 0.50 +1.1 153,364 + Sama_0136 0.50 -0.3 153,364 + Sama_0136 0.50 -0.1 153,364 + Sama_0136 0.50 -0.0 153,365 - Sama_0136 0.50 +2.1 153,379 + Sama_0136 0.51 -1.1 153,380 - Sama_0136 0.51 +0.2 153,395 - Sama_0136 0.52 +0.8 153,449 + Sama_0136 0.57 -0.7 153,449 + Sama_0136 0.57 -0.2 153,463 + Sama_0136 0.58 -0.1 153,463 + Sama_0136 0.58 -1.2 153,463 + Sama_0136 0.58 +1.2 153,463 + Sama_0136 0.58 -2.4 153,463 + Sama_0136 0.58 +1.7 153,463 + Sama_0136 0.58 +0.4 153,463 + Sama_0136 0.58 +0.3 153,463 + Sama_0136 0.58 -0.1 153,464 - Sama_0136 0.58 -0.5 153,464 - Sama_0136 0.58 -0.6 153,464 - Sama_0136 0.58 +0.1 153,464 - Sama_0136 0.58 -0.9 153,464 - Sama_0136 0.58 +1.1 153,464 - Sama_0136 0.58 +0.8 153,464 - Sama_0136 0.58 -0.4 153,464 - Sama_0136 0.58 -0.1 153,464 - Sama_0136 0.58 -0.5 153,464 - Sama_0136 0.58 -0.6 153,504 + Sama_0136 0.61 -0.4 153,504 + Sama_0136 0.61 -1.1 153,504 + Sama_0136 0.61 -0.3 153,504 + Sama_0136 0.61 -0.0 153,504 + Sama_0136 0.61 -0.0 153,504 + Sama_0136 0.61 -0.1 153,505 - Sama_0136 0.62 +0.1 153,505 - Sama_0136 0.62 +0.1 153,505 - Sama_0136 0.62 +0.1 153,505 - Sama_0136 0.62 +0.0 153,505 - Sama_0136 0.62 -1.2 153,595 + Sama_0136 0.69 +1.2 153,604 + Sama_0136 0.70 -0.3 153,635 + Sama_0136 0.72 -0.4 153,635 + Sama_0136 0.72 +0.9 153,635 + Sama_0136 0.72 +1.9 153,635 + Sama_0136 0.72 -0.5 153,636 - Sama_0136 0.73 -1.2 153,636 - Sama_0136 0.73 +0.4 153,668 - Sama_0136 0.75 -0.2 153,668 - Sama_0136 0.75 -0.1 153,668 - Sama_0136 0.75 +0.3 153,716 + Sama_0136 0.79 -0.7 153,724 + Sama_0136 0.80 -0.8 153,733 + Sama_0136 0.81 -0.5 153,733 + Sama_0136 0.81 +0.2 153,743 + Sama_0136 0.81 -0.5 153,744 - Sama_0136 0.82 -0.2 153,843 - Sama_0136 0.90 -0.1 153,909 + +0.5 153,910 - -0.1 153,910 - -1.2 153,910 - -0.3 153,910 - -1.6 153,910 - +0.8 153,910 - -1.4 153,942 + -0.6 153,942 + +0.1 153,943 - +1.4 153,943 - +0.7 153,959 + -0.3 153,959 + +1.3 153,959 + +0.4 153,991 + -0.4 153,991 + -1.7 153,992 - +0.7 153,992 - +0.7 154,038 + +1.1 154,038 + -0.3 154,121 + Sama_0137 0.17 +0.4 154,122 - Sama_0137 0.17 -0.8 154,122 - Sama_0137 0.17 -1.9 154,122 - Sama_0137 0.17 -0.3 154,140 + Sama_0137 0.20 -0.6 154,140 + Sama_0137 0.20 -0.0 154,140 + Sama_0137 0.20 -0.8 154,140 + Sama_0137 0.20 -0.5 154,140 + Sama_0137 0.20 -0.8 154,140 + Sama_0137 0.20 +0.6 154,140 + Sama_0137 0.20 -0.7 154,140 + Sama_0137 0.20 -0.1 154,140 + Sama_0137 0.20 +0.4 154,141 - Sama_0137 0.20 +1.1 154,141 - Sama_0137 0.20 -1.0 154,141 - Sama_0137 0.20 +0.4 154,141 - Sama_0137 0.20 +0.6 154,141 - Sama_0137 0.20 +0.2 154,175 + Sama_0137 0.24 +0.4 154,176 - Sama_0137 0.24 -1.0 154,231 + Sama_0137 0.32 -0.1 154,231 + Sama_0137 0.32 -0.2 154,231 + Sama_0137 0.32 -0.5 154,232 - Sama_0137 0.32 -1.3 154,232 - Sama_0137 0.32 -0.2 154,253 - Sama_0137 0.34 +0.0 154,253 - Sama_0137 0.34 -0.1 154,253 - Sama_0137 0.34 -0.1 154,253 - Sama_0137 0.34 -0.6 154,253 - Sama_0137 0.34 -0.7 154,265 + Sama_0137 0.36 -0.5 154,308 + Sama_0137 0.42 -1.5 154,308 + Sama_0137 0.42 -1.3 154,308 + Sama_0137 0.42 -0.4 154,308 + Sama_0137 0.42 +0.1 154,309 - Sama_0137 0.42 +0.0 154,309 - Sama_0137 0.42 +0.8 154,309 - Sama_0137 0.42 -0.8 154,313 + Sama_0137 0.42 -1.2 154,314 - Sama_0137 0.42 -0.1 154,314 - Sama_0137 0.42 -0.2 154,314 - Sama_0137 0.42 -1.6 154,440 + Sama_0137 0.59 -2.2 154,441 - Sama_0137 0.59 +0.1 154,457 + Sama_0137 0.61 -0.8 154,458 - Sama_0137 0.61 -1.1 154,458 - Sama_0137 0.61 -0.7 154,458 - Sama_0137 0.61 +0.2 154,521 + Sama_0137 0.69 -0.6 154,521 + Sama_0137 0.69 -0.9 154,604 - Sama_0137 0.80 -0.2 154,604 - Sama_0137 0.80 +0.4 154,604 - Sama_0137 0.80 -1.2 154,680 + -0.3 154,680 + +0.4 154,680 + -0.5 154,680 + -1.6 154,680 + -1.7 154,680 + +0.4 154,680 + -0.6 154,680 + -0.2 154,680 + +0.0 154,680 + +0.1 154,680 + +0.1 154,681 - +0.8 154,681 - -0.6 154,681 - -1.2 154,681 - -0.3 154,681 - +0.8 154,681 - +0.5 154,681 - -1.0 154,681 - +0.1 154,681 - +0.5 154,681 - -0.5 154,681 - -0.3 154,681 - -1.1 154,683 - -0.6 154,683 - +0.9 154,714 + -1.6 154,714 + +0.8 154,714 + -0.0 154,715 - -1.1 154,715 - +0.8 154,720 - -1.3 154,740 + +0.4 154,740 + -0.1 154,740 + -0.1 154,740 + -0.9 154,740 + +0.2 154,741 - +0.5 154,741 - -0.0 154,741 - -0.8 154,762 - +0.7 154,774 + -0.5 154,774 + +0.2 154,795 + +2.1 154,795 + -0.8 154,795 + +0.1 154,795 + -0.3 154,795 + +0.7 154,795 + -0.5 154,841 - +0.7 154,873 + -0.1 154,873 + +0.5 154,873 + +0.6 154,873 + -1.1 154,874 - +0.1 154,874 - +0.3 154,874 - -0.9 154,874 - -0.3 154,874 - -0.0 154,930 + Sama_0138 0.14 +0.4 154,932 - Sama_0138 0.14 +0.4 154,932 - Sama_0138 0.14 +1.0 154,932 - Sama_0138 0.14 +0.5 155,041 + Sama_0138 0.23 -0.2 155,042 - Sama_0138 0.23 -0.7 155,042 - Sama_0138 0.23 -1.2 155,042 - Sama_0138 0.23 -0.4 155,364 + Sama_0138 0.49 +0.0 155,364 + Sama_0138 0.49 -1.3 155,365 - Sama_0138 0.49 +0.0 155,365 - Sama_0138 0.49 +0.5 155,380 - Sama_0138 0.50 -0.4 155,380 - Sama_0138 0.50 -1.3 155,462 + Sama_0138 0.57 +0.1 155,462 + Sama_0138 0.57 +1.5 155,463 - Sama_0138 0.57 +0.5 155,463 - Sama_0138 0.57 -1.0 155,522 + Sama_0138 0.61 +0.6 155,522 + Sama_0138 0.61 +0.2 155,522 + Sama_0138 0.61 -0.1 155,522 + Sama_0138 0.61 +0.7 155,522 + Sama_0138 0.61 -0.7 155,523 - Sama_0138 0.61 +1.2 155,523 - Sama_0138 0.61 -0.4 155,523 - Sama_0138 0.61 +0.2 155,523 - Sama_0138 0.61 +0.8 155,554 + Sama_0138 0.64 +1.4 155,554 + Sama_0138 0.64 +0.1 155,554 + Sama_0138 0.64 -0.8 155,555 - Sama_0138 0.64 -0.0 155,555 - Sama_0138 0.64 +0.5 155,608 + Sama_0138 0.68 +0.3 155,609 - Sama_0138 0.68 -0.3 155,726 - Sama_0138 0.78 +1.0
Or see this region's nucleotide sequence