Strain Fitness in Shewanella oneidensis MR-1 around SOA0132

Experiment: Cytidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (C)
115,737	+				-0.1
115,747	+				-0.1
115,747	+				+0.9
115,749	+				+1.2
115,761	-				+0.1
115,775	+				+0.6
115,777	+				-0.0
115,777	+				+0.8
115,777	+				-0.3
115,777	+				+0.3
115,777	+				+0.7
115,777	+				-1.2
115,777	+				+0.1
115,777	+				-1.5
115,777	+				-0.3
115,777	+				+0.2
115,777	+				-0.4
115,777	+				-0.1
115,777	+				+0.4
115,777	+				+0.2
115,777	+				-0.5
115,780	-				+0.4
115,785	-				-0.3
115,785	-				-1.2
115,785	-				-0.4
115,785	-				+0.5
115,785	-				+1.2
115,785	-				-0.1
115,785	-				+0.8
115,785	-				+0.2
115,785	-				+0.5
115,785	-				+0.5
115,785	-				+0.6
115,785	-				-0.7
115,785	-				-0.0
115,785	-				+2.7
115,785	-				-0.7
115,785	-				-2.1
115,785	-				-0.3
115,785	-				-0.1
115,785	-				-0.2
115,787	+				-1.0
115,787	+				+1.4
115,787	+				+0.0
115,787	+				-0.3
115,787	+				-0.1
115,787	+				+1.1
115,787	+				+0.8
115,787	+				+0.4
115,787	+				+0.4
115,787	+				+0.1
115,787	+				-0.2
115,787	+				+0.5
115,787	+				+0.3
115,787	+				-0.4
115,787	+				+0.1
115,787	+				-0.6
115,787	+				-0.3
115,787	+				+0.4
115,787	+				+0.2
115,787	+				-0.2
115,787	+				-0.3
115,787	+				-0.0
115,787	+				+0.1
115,787	+				-0.8
115,787	+				+1.4
115,787	+				-1.0
115,787	+				+0.0
115,787	+				+0.5
115,787	+				+0.2
115,787	+				-0.2
115,787	+				+0.0
115,787	+				+0.1
115,787	+				-1.8
115,787	+				+0.3
115,787	+				+0.9
115,787	+				+0.2
115,787	+				+0.5
115,787	+				+1.4
115,787	+				+0.5
115,787	+				-0.2
115,787	+				-0.0
115,787	+				-1.0
115,787	+				+1.5
115,787	+				+0.2
115,789	+				+0.8
115,795	-				+0.3
115,795	-				-1.0
115,795	-				-0.8
115,795	-				+1.0
115,795	-				-0.3
115,795	-				-0.2
115,795	-				+0.3
115,795	-				+0.6
115,795	-				+0.3
115,795	-				+0.1
115,795	-				+0.7
115,795	-				+0.6
115,795	-				-0.7
115,795	-				+0.3
115,795	-				+0.2
115,795	-				+0.3
115,795	-				-0.8
115,795	-				+2.0
115,795	-				-0.5
115,795	-				+0.4
115,795	-				-0.7
115,795	-				+0.1
115,795	-				+0.5
115,795	-				-1.3
115,795	-				-0.4
115,795	-				-0.5
115,795	-				-1.4
115,795	-				+0.8
115,795	-				+0.5
115,795	-				-1.1
115,795	-				-0.1
115,795	-				-0.3
115,795	-				+0.0
115,795	-				+0.0
115,795	-				+3.7
115,795	-				-1.6
115,795	-				-1.6
115,795	-				-0.9
115,795	-				+0.3
115,795	-				-0.3
115,795	-				-0.1
115,795	-				+0.0
115,795	-				+1.6
115,795	-				+0.2
115,795	-				-0.1
115,795	-				+0.4
115,795	-				+0.5
115,797	+				+0.4
115,797	-				+2.0
115,799	-				-0.3
115,805	-				+0.1
115,820	+				+0.3
115,821	-				+0.9
115,828	+				-1.4
115,828	-				-0.1
115,831	+				+0.2
115,833	+				+0.1
115,833	+				-0.2
115,833	+				+1.0
115,833	+				+0.4
115,834	-				-0.0
115,836	-				+0.3
115,836	-				+0.0
115,836	-				+0.3
115,841	-				-1.1
115,848	+				+1.2
115,860	+				-0.1
115,870	+				+0.3
115,878	-				+0.2
115,878	-				-0.2
115,878	-				+0.0
115,878	-				+1.2
115,880	+				+0.8
115,886	-				-0.1
115,887	-				-1.7
115,891	+				+0.1
115,896	+				-0.3
115,896	+				-0.3
115,896	+				+0.0
115,896	+				-0.0
115,896	+				+0.4
115,896	+				-0.4
115,896	+				+0.1
115,899	-				-0.4
115,901	+				-0.3
115,901	+				+0.5
115,901	+				+0.9
115,901	+				+0.0
115,901	+				+0.8
115,901	+				-0.3
115,901	+				-0.4
115,901	+				+0.6
115,901	+				-0.8
115,901	+				+0.4
115,901	+				-0.1
115,901	+				-0.0
115,904	-				-0.8
115,904	-				+0.7
115,904	-				-0.8
115,904	-				+0.5
115,904	-				-0.8
115,904	-				-0.3
115,909	-				+0.1
115,909	-				+0.5
115,909	-				-0.1
115,909	-				+1.7
115,909	-				+0.5
115,909	-				+0.3
115,909	-				+3.1
115,909	-				-0.6
115,909	-				+0.1
115,909	-				-0.0
115,909	-				+0.6
115,909	-				+0.1
115,909	-				+1.0
115,910	-				+0.0
115,936	+				+0.0
115,936	-				+0.5
115,959	+				-1.0
115,959	+				-0.3
115,959	+				-0.1
115,959	+				+1.1
115,959	+				+0.8
115,959	+				+0.4
115,966	+				+0.3
115,967	-				+0.8
115,967	-				+0.2
115,967	-				+0.2
115,967	-				+0.0
115,967	-				+0.6
115,967	-				+0.1
115,967	-				+0.1
115,967	-				+0.9
115,971	+				+0.2
115,971	+				+0.6
115,971	+				+0.0
115,971	+				+0.1
115,971	+				+0.6
115,971	+				+1.4
115,971	+				+0.1
115,971	+				-0.5
115,971	+				-0.1
115,971	+				+0.9
115,971	+				-0.8
115,971	+				-0.5
115,971	+				+0.2
115,971	+				-1.0
115,971	+				+0.7
115,971	+				+1.0
115,971	+				-0.2
115,971	+				+0.9
115,971	+				+1.0
115,971	+				+1.0
115,971	+				+0.3
115,971	-				+0.1
115,973	+				+0.9
115,979	-				+1.4
115,979	-				+0.3
115,979	-				+0.0
115,979	-				+1.1
115,979	-				-0.3
115,979	-				-0.3
115,979	-				-0.9
115,979	-				-0.1
115,979	-				+0.5
115,979	-				-1.4
115,979	-				-0.8
115,979	-				+0.1
115,979	-				-0.6
115,979	-				-0.1
115,979	-				+0.1
115,979	-				+0.4
115,979	-				+0.8
115,979	-				+0.8
116,006	+				+0.1
116,014	-				+0.9
116,035	-				+0.3
116,064	+				-0.0
116,064	+				+1.0
116,064	+				-0.3
116,064	+				-0.2
116,064	+				-0.0
116,064	+				+0.0
116,064	+				+0.1
116,064	+				+0.5
116,064	+				+0.5
116,064	+				-0.4
116,064	+				+0.9
116,064	+				-0.2
116,064	+				-0.7
116,064	+				+0.6
116,064	+				-0.7
116,069	+				+0.2
116,069	+				+0.4
116,069	+				+0.4
116,072	-				-0.2
116,072	-				-0.8
116,072	-				-0.4
116,072	-				+0.4
116,072	-				+0.8
116,072	-				+1.4
116,072	-				+0.4
116,072	-				+0.4
116,072	-				+0.5
116,072	-				-0.8
116,072	-				+0.5
116,072	-				+0.3
116,072	-				+0.1
116,072	-				-1.0
116,074	+				+0.3
116,074	+				+0.5
116,077	-				-1.8
116,082	-				+0.0
116,085	+				+0.9
116,086	+				+1.0
116,086	+				+0.3
116,087	-				+0.5
116,093	-				-0.4
116,093	-				+0.2
116,093	-				+0.3
116,093	-				-1.0
116,093	-				-0.4
116,093	-				-1.2
116,094	-				-0.0
116,094	-				-0.3
116,094	-				-0.5
116,142	+				-0.1
116,142	-				+0.5
116,144	+				+0.9
116,144	+				-0.8
116,144	+				+0.9
116,147	-				-0.3
116,149	-		SO_A0131	0.10	+0.5
116,150	+		SO_A0131	0.10	+0.2
116,150	-		SO_A0131	0.10	+1.1
116,152	-		SO_A0131	0.11	-0.1
116,152	-		SO_A0131	0.11	-0.4
116,152	-		SO_A0131	0.11	-0.2
116,152	-		SO_A0131	0.11	-1.0
116,182	-		SO_A0131	0.18	-0.1
116,208	+		SO_A0131	0.24	-0.5
116,208	+		SO_A0131	0.24	-0.2
116,208	+		SO_A0131	0.24	-0.5
116,215	-		SO_A0131	0.26	+0.4
116,302	+		SO_A0131	0.47	+0.1
116,303	+		SO_A0131	0.47	-0.7
116,304	-		SO_A0131	0.48	+1.1
116,310	-		SO_A0131	0.49	+0.3
116,311	-		SO_A0131	0.49	-0.8
116,311	-		SO_A0131	0.49	-0.1
116,316	-		SO_A0131	0.51	+0.6
116,328	+		SO_A0131	0.54	+1.0
116,335	+		SO_A0131	0.55	-0.1
116,335	+		SO_A0131	0.55	+1.2
116,341	+		SO_A0131	0.57	-0.2
116,342	+		SO_A0131	0.57	+0.1
116,342	+		SO_A0131	0.57	+0.0
116,342	+		SO_A0131	0.57	+0.0
116,342	+		SO_A0131	0.57	-0.4
116,350	-		SO_A0131	0.59	+1.0
116,352	-		SO_A0131	0.59	-0.8
116,352	-		SO_A0131	0.59	+1.8
116,357	-		SO_A0131	0.61	-0.4
116,362	-		SO_A0131	0.62	+0.3
116,374	-		SO_A0131	0.65	-1.4
116,376	-		SO_A0131	0.65	+0.4
116,376	-		SO_A0131	0.65	+0.9
116,381	-		SO_A0131	0.66	+1.1
116,418	+		SO_A0131	0.75	+0.8
116,418	+		SO_A0131	0.75	-0.6
116,418	+		SO_A0131	0.75	+0.1
116,426	+		SO_A0131	0.77	+0.8
116,426	-		SO_A0131	0.77	-0.1
116,449	+		SO_A0131	0.83	+0.2
116,455	+		SO_A0131	0.84	-0.2
116,455	+		SO_A0131	0.84	+1.1
116,455	+		SO_A0131	0.84	+0.1
116,455	+		SO_A0131	0.84	-0.4
116,455	+		SO_A0131	0.84	+1.8
116,458	-		SO_A0131	0.85	-0.1
116,462	+		SO_A0131	0.86	-0.1
116,463	+		SO_A0131	0.86	+0.5
116,463	-		SO_A0131	0.86	-0.6
116,463	-		SO_A0131	0.86	+1.1
116,471	-		SO_A0131	0.88	+0.0
116,471	-		SO_A0131	0.88	-1.1
116,486	+				-0.6
116,486	+				+0.3
116,486	+				+0.8
116,494	-				+0.2
116,494	-				-3.5
116,494	-				-1.0
116,494	-				+0.2
116,494	-				+0.1
116,494	-				-0.1
116,541	+				+0.4
116,541	+				-0.0
116,541	+				+1.0
116,541	+				+0.7
116,541	+				+0.3
116,549	-				+0.0
116,549	-				-0.4
116,565	+		SOA0132	0.11	+0.2
116,567	-		SOA0132	0.11	-2.6
116,570	+		SOA0132	0.12	+0.0
116,573	-		SOA0132	0.13	-0.1
116,578	+		SOA0132	0.14	+1.4
116,578	-		SOA0132	0.14	-0.2
116,586	-		SOA0132	0.15	-0.0
116,591	+		SOA0132	0.17	+0.1
116,591	+		SOA0132	0.17	+0.9
116,612	-		SOA0132	0.21	+0.6
116,614	+		SOA0132	0.22	+0.7
116,637	+		SOA0132	0.27	-1.4
116,641	-		SOA0132	0.27	-0.5
116,647	+		SOA0132	0.29	-0.3
116,647	+		SOA0132	0.29	-0.4
116,647	+		SOA0132	0.29	-1.0
116,647	+		SOA0132	0.29	+1.6
116,647	+		SOA0132	0.29	+0.1
116,647	+		SOA0132	0.29	+0.7
116,647	+		SOA0132	0.29	-0.2
116,647	+		SOA0132	0.29	+0.8
116,647	+		SOA0132	0.29	-0.1
116,647	+		SOA0132	0.29	+2.2
116,647	+		SOA0132	0.29	-1.8
116,647	+		SOA0132	0.29	+0.6
116,647	+		SOA0132	0.29	-0.1
116,647	+		SOA0132	0.29	+0.7
116,647	+		SOA0132	0.29	+0.6
116,647	+		SOA0132	0.29	+0.3
116,647	+		SOA0132	0.29	+0.8
116,647	+		SOA0132	0.29	-0.6
116,647	+		SOA0132	0.29	+1.1
116,647	+		SOA0132	0.29	-0.0
116,647	+		SOA0132	0.29	+0.2
116,647	+		SOA0132	0.29	+0.6
116,647	+		SOA0132	0.29	+0.5
116,647	+		SOA0132	0.29	-0.8
116,647	+		SOA0132	0.29	+0.2
116,647	+		SOA0132	0.29	+1.2
116,647	+		SOA0132	0.29	+1.0
116,647	+		SOA0132	0.29	+0.3
116,647	+		SOA0132	0.29	+0.3
116,647	+		SOA0132	0.29	+0.2
116,647	+		SOA0132	0.29	-0.9
116,647	+		SOA0132	0.29	+0.3
116,647	+		SOA0132	0.29	+0.3
116,647	+		SOA0132	0.29	-0.6
116,647	+		SOA0132	0.29	-0.0
116,647	+		SOA0132	0.29	+0.5
116,647	+		SOA0132	0.29	+0.2
116,647	+		SOA0132	0.29	+0.1
116,647	+		SOA0132	0.29	+0.6
116,647	+		SOA0132	0.29	-0.0
116,647	+		SOA0132	0.29	-0.5
116,647	+		SOA0132	0.29	-1.3
116,655	-		SOA0132	0.31	-0.2
116,655	-		SOA0132	0.31	+0.4
116,655	-		SOA0132	0.31	+0.0
116,655	-		SOA0132	0.31	-2.1
116,655	-		SOA0132	0.31	+0.1
116,655	-		SOA0132	0.31	+0.0
116,655	-		SOA0132	0.31	+0.9
116,655	-		SOA0132	0.31	+1.5
116,655	-		SOA0132	0.31	-0.3
116,655	-		SOA0132	0.31	+0.1
116,655	-		SOA0132	0.31	+0.4
116,655	-		SOA0132	0.31	-0.2
116,655	-		SOA0132	0.31	+0.0
116,655	-		SOA0132	0.31	+0.4
116,655	-		SOA0132	0.31	-0.6
116,655	-		SOA0132	0.31	-0.1
116,655	-		SOA0132	0.31	+0.1
116,655	-		SOA0132	0.31	+0.9
116,655	-		SOA0132	0.31	+0.6
116,655	-		SOA0132	0.31	-0.6
116,655	-		SOA0132	0.31	-0.2
116,655	-		SOA0132	0.31	-0.2
116,655	-		SOA0132	0.31	+0.6
116,655	-		SOA0132	0.31	+1.5
116,655	-		SOA0132	0.31	+0.9
116,655	-		SOA0132	0.31	-0.1
116,655	-		SOA0132	0.31	+1.0
116,655	-		SOA0132	0.31	-0.4
116,655	-		SOA0132	0.31	+0.2
116,655	-		SOA0132	0.31	-0.0
116,655	-		SOA0132	0.31	-0.1
116,655	-		SOA0132	0.31	+0.3
116,655	-		SOA0132	0.31	-0.2
116,655	-		SOA0132	0.31	-0.3
116,655	-		SOA0132	0.31	-0.2
116,655	-		SOA0132	0.31	-0.5
116,655	-		SOA0132	0.31	+0.4
116,697	+		SOA0132	0.40	+0.3
116,697	+		SOA0132	0.40	+0.6
116,697	+		SOA0132	0.40	-0.5
116,697	+		SOA0132	0.40	+0.3
116,704	+		SOA0132	0.41	-1.7
116,704	+		SOA0132	0.41	+0.1
116,704	+		SOA0132	0.41	-0.5
116,704	+		SOA0132	0.41	+0.9
116,704	+		SOA0132	0.41	+1.3
116,705	+		SOA0132	0.41	+0.7
116,705	+		SOA0132	0.41	-0.0
116,705	-		SOA0132	0.41	-0.2
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117,411	-		SO_A0133	0.16	-0.5
117,411	-		SO_A0133	0.16	-0.0
117,434	+		SO_A0133	0.19	+0.8
117,437	-		SO_A0133	0.19	+1.4
117,441	+		SO_A0133	0.19	-0.1
117,442	-		SO_A0133	0.20	-0.5
117,446	+		SO_A0133	0.20	-0.7
117,460	+		SO_A0133	0.21	+0.7
117,468	-		SO_A0133	0.22	+0.7
117,504	+		SO_A0133	0.26	+0.0
117,602	+		SO_A0133	0.37	+0.7
117,680	+		SO_A0133	0.45	-0.0
117,757	-		SO_A0133	0.53	+0.0
117,763	+		SO_A0133	0.54	+0.0
117,763	+		SO_A0133	0.54	-0.5
117,763	+		SO_A0133	0.54	-0.0
117,771	-		SO_A0133	0.54	-1.0
117,771	-		SO_A0133	0.54	-0.7
117,771	-		SO_A0133	0.54	-0.2
117,774	+		SO_A0133	0.55	-0.8
117,774	+		SO_A0133	0.55	+0.4
117,774	+		SO_A0133	0.55	+1.3
117,774	+		SO_A0133	0.55	-0.2
117,782	-		SO_A0133	0.56	-1.1
117,782	-		SO_A0133	0.56	+0.6
117,782	-		SO_A0133	0.56	+0.3
117,782	-		SO_A0133	0.56	-1.4
117,784	+		SO_A0133	0.56	-0.7
117,784	+		SO_A0133	0.56	-0.3
117,805	-		SO_A0133	0.58	+0.5
117,822	+		SO_A0133	0.60	-0.2
117,822	+		SO_A0133	0.60	-0.1
117,822	+		SO_A0133	0.60	+1.5
117,830	-		SO_A0133	0.61	-1.4
117,830	-		SO_A0133	0.61	+0.0
117,830	-		SO_A0133	0.61	-0.9
117,830	-		SO_A0133	0.61	+1.1
117,831	+		SO_A0133	0.61	+0.0
117,849	-		SO_A0133	0.63	-0.0
117,878	-		SO_A0133	0.66	+0.7
117,910	+		SO_A0133	0.69	+0.1
117,910	+		SO_A0133	0.69	+0.9
117,910	+		SO_A0133	0.69	+0.1
117,910	+		SO_A0133	0.69	+0.3
117,918	-		SO_A0133	0.70	-0.6
117,945	+		SO_A0133	0.73	+0.3
117,953	+		SO_A0133	0.74	+1.3
117,961	-		SO_A0133	0.75	-1.1
117,961	-		SO_A0133	0.75	+0.2
117,966	-		SO_A0133	0.75	-0.6