Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2932

Experiment: Nalidixic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.001 mg/ml
3,127,703	+		Psest_2931	0.66	-0.9
3,127,703	+		Psest_2931	0.66	-0.8
3,127,704	-		Psest_2931	0.66	+1.4
3,127,721	+		Psest_2931	0.67	-1.1
3,127,721	+		Psest_2931	0.67	-0.2
3,127,721	+		Psest_2931	0.67	+0.3
3,127,839	-		Psest_2931	0.74	-0.1
3,127,839	-		Psest_2931	0.74	+0.4
3,128,004	-		Psest_2931	0.83	-0.4
3,128,004	-		Psest_2931	0.83	+0.6
3,128,162	+				-1.0
3,128,188	+				-0.4
3,128,188	+				+0.2
3,128,188	+				+0.1
3,128,189	-				+0.6
3,128,189	-				+0.1
3,128,189	-				-2.3
3,128,363	+				-0.6
3,128,363	+				-0.5
3,128,363	+				-0.2
3,128,364	-				+2.2
3,128,364	-				-0.2
3,128,364	-				-0.1
3,128,364	-				+0.1
3,128,364	-				+0.7
3,128,448	+				+0.1
3,128,449	-				+0.3
3,128,449	-				+0.6
3,128,449	-				+0.5
3,128,449	-				-0.1
3,128,449	-				+0.8
3,128,521	-				-1.5
3,128,701	+		Psest_2932	0.24	+0.1
3,128,702	-		Psest_2932	0.24	+1.1
3,128,871	+		Psest_2932	0.38	-0.4
3,128,872	-		Psest_2932	0.38	-0.1
3,128,877	+		Psest_2932	0.38	+0.0
3,128,877	+		Psest_2932	0.38	-0.2
3,128,877	+		Psest_2932	0.38	+0.1
3,128,878	-		Psest_2932	0.38	-1.3
3,128,878	-		Psest_2932	0.38	-0.2
3,128,878	-		Psest_2932	0.38	-1.1
3,128,878	-		Psest_2932	0.38	+0.0
3,128,878	-		Psest_2932	0.38	+0.1
3,128,964	+		Psest_2932	0.46	-0.1
3,128,964	+		Psest_2932	0.46	+0.7
3,128,965	-		Psest_2932	0.46	-0.4
3,128,965	-		Psest_2932	0.46	-0.8
3,128,967	-		Psest_2932	0.46	+0.0
3,128,967	-		Psest_2932	0.46	+1.7
3,128,967	-		Psest_2932	0.46	-1.0
3,129,306	+		Psest_2932	0.74	-0.5
3,129,309	+		Psest_2932	0.74	-1.4
3,129,310	-		Psest_2932	0.74	-0.7
3,129,310	-		Psest_2932	0.74	-0.2
3,129,310	-		Psest_2932	0.74	+0.2
3,129,450	+		Psest_2932	0.86	-0.2
3,129,450	+		Psest_2932	0.86	+0.4
3,129,450	+		Psest_2932	0.86	-0.5
3,129,451	-		Psest_2932	0.86	-0.4
3,129,451	-		Psest_2932	0.86	+0.0
3,129,451	-		Psest_2932	0.86	+0.0
3,129,451	-		Psest_2932	0.86	-0.2
3,129,663	+				+0.1
3,129,663	+				-0.2
3,129,663	+				+0.2
3,129,734	+				-0.1
3,129,734	+				+0.5
3,129,735	-				-1.4
3,129,735	-				-2.4
3,129,735	-				-0.4
3,129,735	-				-0.5
3,129,735	-				-1.3
3,129,769	+				+0.3
3,129,769	+				+0.8
3,129,769	+				+0.5
3,129,769	+				+0.9
3,129,772	+				+0.5
3,129,772	+				+0.4
3,129,772	+				+0.8
3,129,772	+				+0.3
3,129,772	+				-0.4
3,129,772	+				+0.1
3,129,772	+				+0.6
3,129,772	+				+0.3
3,129,772	+				+0.5
3,129,772	+				+1.0
3,129,772	+				+0.7
3,129,772	+				+0.9
3,129,773	-				-1.2
3,129,773	-				-1.7
3,129,773	-				-0.4
3,129,775	+				-0.5
3,129,775	+				+1.0
3,129,775	+				+0.3
3,129,775	+				+0.8
3,129,775	+				-0.1
3,129,775	+				-0.3
3,129,775	+				-1.0
3,129,775	+				+1.0
3,129,776	-				-3.3
3,129,776	-				-4.0
3,129,776	-				-1.0
3,129,776	-				-1.6
3,129,776	-				-1.4
3,129,776	-				-1.7
3,129,776	-				-0.8
3,129,776	-				-1.3
3,129,776	-				+0.8
3,129,776	-				-2.7
3,129,776	-				+2.1
3,129,776	-				-1.6
3,129,776	-				-1.7
3,130,121	-		Psest_2933	0.11	-2.3
3,130,138	-		Psest_2933	0.12	-1.8
3,130,306	+		Psest_2933	0.18	-1.2
3,130,306	+		Psest_2933	0.18	-1.4
3,130,307	-		Psest_2933	0.18	-0.2
3,130,318	+		Psest_2933	0.18	-1.8
3,130,330	+		Psest_2933	0.19	-0.8
3,130,330	+		Psest_2933	0.19	-0.4
3,130,330	+		Psest_2933	0.19	-0.7
3,130,330	+		Psest_2933	0.19	-1.9
3,130,331	-		Psest_2933	0.19	-1.4
3,130,331	-		Psest_2933	0.19	-2.1
3,130,384	+		Psest_2933	0.21	-1.9
3,130,385	-		Psest_2933	0.21	-1.4
3,130,385	-		Psest_2933	0.21	-1.0
3,130,411	+		Psest_2933	0.22	+1.2
3,130,412	-		Psest_2933	0.22	-0.8
3,130,450	+		Psest_2933	0.23	-1.6
3,130,451	-		Psest_2933	0.23	-0.7
3,130,451	-		Psest_2933	0.23	-1.1
3,130,451	-		Psest_2933	0.23	-0.5
3,130,469	-		Psest_2933	0.24	-2.4
3,130,469	-		Psest_2933	0.24	-0.2
3,130,561	+		Psest_2933	0.27	-1.3
3,130,561	+		Psest_2933	0.27	-0.2
3,130,561	+		Psest_2933	0.27	-0.4
3,130,561	+		Psest_2933	0.27	-1.9
3,130,561	+		Psest_2933	0.27	-1.0
3,130,561	+		Psest_2933	0.27	+0.1
3,130,561	+		Psest_2933	0.27	-0.8
3,130,561	+		Psest_2933	0.27	-2.5
3,130,561	+		Psest_2933	0.27	-2.5
3,130,561	+		Psest_2933	0.27	-1.5
3,130,561	+		Psest_2933	0.27	-0.8
3,130,562	-		Psest_2933	0.27	-0.1
3,130,562	-		Psest_2933	0.27	+0.1
3,130,562	-		Psest_2933	0.27	+1.6
3,130,562	-		Psest_2933	0.27	-1.9
3,130,562	-		Psest_2933	0.27	-0.5
3,130,562	-		Psest_2933	0.27	-1.2
3,130,562	-		Psest_2933	0.27	-0.6
3,130,562	-		Psest_2933	0.27	-0.6
3,130,562	-		Psest_2933	0.27	-0.9