Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2020
Experiment: Nalidixic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,139,483 | - | -0.2 | |||
2,139,483 | - | +0.2 | |||
2,139,483 | - | -0.4 | |||
2,139,754 | + | Psest_2020 | 0.36 | -0.5 | |
2,139,754 | + | Psest_2020 | 0.36 | -2.3 | |
2,139,754 | + | Psest_2020 | 0.36 | -0.6 | |
2,139,756 | + | Psest_2020 | 0.37 | -0.5 | |
2,139,756 | + | Psest_2020 | 0.37 | -0.0 | |
2,139,757 | - | Psest_2020 | 0.37 | +0.2 | |
2,139,905 | - | Psest_2020 | 0.60 | -0.6 | |
2,139,910 | - | Psest_2020 | 0.61 | -1.0 | |
2,140,000 | + | Psest_2020 | 0.75 | -1.2 |
Or see this region's nucleotide sequence