Strain Fitness in Shewanella amazonensis SB2B around Sama_3564

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,198,067	+				-1.6
4,198,078	+				-0.8
4,198,078	+				-0.5
4,198,079	-				-0.3
4,198,079	-				-0.1
4,198,079	-				+2.1
4,198,111	+				-0.8
4,198,112	-				-1.0
4,198,112	-				+0.2
4,198,112	-				-0.2
4,198,131	+				-0.1
4,198,132	-				-0.7
4,198,158	-		Sama_3563	0.13	+1.7
4,198,290	+		Sama_3563	0.28	+0.0
4,198,290	+		Sama_3563	0.28	+1.5
4,198,291	-		Sama_3563	0.29	+0.7
4,198,291	-		Sama_3563	0.29	+0.4
4,198,312	+		Sama_3563	0.31	+1.0
4,198,312	+		Sama_3563	0.31	-1.4
4,198,312	+		Sama_3563	0.31	-1.4
4,198,312	+		Sama_3563	0.31	-0.4
4,198,312	+		Sama_3563	0.31	-0.5
4,198,312	+		Sama_3563	0.31	-1.6
4,198,312	+		Sama_3563	0.31	+0.3
4,198,312	+		Sama_3563	0.31	+0.2
4,198,312	+		Sama_3563	0.31	+3.3
4,198,313	-		Sama_3563	0.31	+0.2
4,198,313	-		Sama_3563	0.31	-1.5
4,198,313	-		Sama_3563	0.31	+0.0
4,198,313	-		Sama_3563	0.31	+0.7
4,198,313	-		Sama_3563	0.31	-1.3
4,198,313	-		Sama_3563	0.31	+0.7
4,198,313	-		Sama_3563	0.31	+0.1
4,198,313	-		Sama_3563	0.31	-2.6
4,198,313	-		Sama_3563	0.31	-0.5
4,198,313	-		Sama_3563	0.31	-0.4
4,198,313	-		Sama_3563	0.31	+1.3
4,198,313	-		Sama_3563	0.31	+0.5
4,198,313	-		Sama_3563	0.31	-0.8
4,198,313	-		Sama_3563	0.31	-0.1
4,198,313	-		Sama_3563	0.31	+1.0
4,198,313	-		Sama_3563	0.31	-0.6
4,198,313	-		Sama_3563	0.31	+0.8
4,198,315	-		Sama_3563	0.31	+1.2
4,198,315	-		Sama_3563	0.31	+0.7
4,198,369	+		Sama_3563	0.38	-1.3
4,198,370	-		Sama_3563	0.38	-0.3
4,198,398	+		Sama_3563	0.41	+0.7
4,198,399	-		Sama_3563	0.41	-1.0
4,198,466	+		Sama_3563	0.49	-1.8
4,198,466	+		Sama_3563	0.49	+0.7
4,198,466	+		Sama_3563	0.49	-0.8
4,198,467	-		Sama_3563	0.49	-1.7
4,198,467	-		Sama_3563	0.49	-0.9
4,198,476	+		Sama_3563	0.50	-0.4
4,198,477	-		Sama_3563	0.50	-1.0
4,198,491	+		Sama_3563	0.52	+0.2
4,198,498	+		Sama_3563	0.53	+0.3
4,198,498	+		Sama_3563	0.53	+1.1
4,198,498	+		Sama_3563	0.53	-0.1
4,198,498	+		Sama_3563	0.53	-0.1
4,198,499	-		Sama_3563	0.53	-0.4
4,198,499	-		Sama_3563	0.53	-1.3
4,198,499	-		Sama_3563	0.53	+0.7
4,198,547	+		Sama_3563	0.58	-0.8
4,198,547	+		Sama_3563	0.58	-1.7
4,198,547	+		Sama_3563	0.58	-0.4
4,198,547	+		Sama_3563	0.58	-1.6
4,198,548	-		Sama_3563	0.59	+1.0
4,198,548	-		Sama_3563	0.59	-1.0
4,198,572	-		Sama_3563	0.61	+0.5
4,198,572	-		Sama_3563	0.61	+0.6
4,198,619	+		Sama_3563	0.67	+0.3
4,198,660	+		Sama_3563	0.72	-0.3
4,198,660	+		Sama_3563	0.72	-1.7
4,198,661	-		Sama_3563	0.72	-1.6
4,198,661	-		Sama_3563	0.72	-0.8
4,198,661	-		Sama_3563	0.72	+0.3
4,198,661	-		Sama_3563	0.72	-0.7
4,198,661	-		Sama_3563	0.72	+0.3
4,198,709	+		Sama_3563	0.77	+0.3
4,198,710	-		Sama_3563	0.78	-0.9
4,198,720	+		Sama_3563	0.79	+1.3
4,198,720	+		Sama_3563	0.79	-1.0
4,198,757	+		Sama_3563	0.83	-1.0
4,198,757	+		Sama_3563	0.83	-0.6
4,198,757	+		Sama_3563	0.83	+0.6
4,198,758	-		Sama_3563	0.83	-1.1
4,198,758	-		Sama_3563	0.83	-0.4
4,198,759	+		Sama_3563	0.83	-0.3
4,198,760	-		Sama_3563	0.83	+0.5
4,198,785	+		Sama_3563	0.86	-0.6
4,198,785	+		Sama_3563	0.86	+0.5
4,198,785	+		Sama_3563	0.86	-0.8
4,198,785	+		Sama_3563	0.86	-0.9
4,198,785	+		Sama_3563	0.86	+0.9
4,198,786	-		Sama_3563	0.86	+1.0
4,198,786	-		Sama_3563	0.86	-0.3
4,198,786	-		Sama_3563	0.86	-2.1
4,198,786	-		Sama_3563	0.86	-1.3
4,198,786	-		Sama_3563	0.86	-0.4
4,198,789	+		Sama_3563	0.87	-0.8
4,198,789	+		Sama_3563	0.87	+0.3
4,198,789	+		Sama_3563	0.87	-0.9
4,198,789	+		Sama_3563	0.87	+0.9
4,198,790	-		Sama_3563	0.87	-1.4
4,198,790	-		Sama_3563	0.87	-0.3
4,198,790	-		Sama_3563	0.87	+1.2
4,198,790	-		Sama_3563	0.87	-2.4
4,198,802	+		Sama_3563	0.88	-1.5
4,198,802	+		Sama_3563	0.88	+0.2
4,198,826	+				-1.5
4,198,851	+				-0.2
4,198,851	+				+1.6
4,198,851	+				-0.6
4,198,852	-				-0.8
4,198,852	-				-0.6
4,198,852	-				-1.1
4,198,864	+				+0.6
4,198,864	+				-0.5
4,198,864	+				-0.8
4,198,864	+				-0.2
4,198,864	+				+2.3
4,198,864	+				-0.5
4,198,864	+				-2.2
4,198,864	+				+0.5
4,198,865	-				-0.6
4,198,865	-				+0.7
4,198,891	+				-1.0
4,198,892	-				-0.5
4,198,901	+				-1.0
4,198,901	+				+0.7
4,198,902	-				-1.1
4,198,902	-				-1.4
4,198,920	+				-0.7
4,198,921	-				+1.7
4,198,921	-				-1.1
4,198,921	-				+0.4
4,198,921	-				-1.6
4,198,944	+				+0.7
4,198,944	+				-0.5
4,198,944	+				+0.3
4,198,944	+				-0.8
4,198,944	+				+1.3
4,198,944	+				-0.0
4,198,944	+				-0.8
4,198,944	+				+0.3
4,198,945	-				+0.7
4,198,945	-				-0.2
4,198,945	-				-1.6
4,198,945	-				-1.1
4,198,945	-				+0.0
4,198,945	-				+0.3
4,198,945	-				-1.0
4,198,946	+				+3.3
4,198,946	+				+0.0
4,198,946	+				-0.8
4,198,946	+				-0.8
4,198,946	+				-0.7
4,198,946	+				+1.0
4,198,947	-				+0.2
4,198,947	-				-0.7
4,198,947	-				-0.3
4,198,947	-				+0.7
4,198,947	-				+1.2
4,198,947	-				-0.5
4,198,967	+				+0.5
4,198,967	+				+1.2
4,198,967	+				-1.0
4,198,967	+				-1.8
4,199,000	+				+1.0
4,199,000	+				-0.4
4,199,002	+				+0.5
4,199,002	+				-0.2
4,199,002	+				-1.0
4,199,002	+				-0.4
4,199,002	+				+0.5
4,199,003	-				+0.5
4,199,003	-				+0.6
4,199,020	+				-1.8
4,199,020	+				+1.5
4,199,021	-				+0.9
4,199,021	-				-1.8
4,199,101	+				+0.0
4,199,101	+				+0.2
4,199,102	-				+0.5
4,199,102	-				+0.7
4,199,102	-				-1.3
4,199,102	-				+0.0
4,199,148	+		Sama_3564	0.15	+0.5
4,199,148	+		Sama_3564	0.15	+0.3
4,199,148	+		Sama_3564	0.15	-1.4
4,199,148	+		Sama_3564	0.15	+0.5
4,199,149	-		Sama_3564	0.15	+0.0
4,199,149	-		Sama_3564	0.15	-0.3
4,199,149	-		Sama_3564	0.15	-0.4
4,199,149	-		Sama_3564	0.15	-1.0
4,199,149	-		Sama_3564	0.15	-0.3
4,199,192	-		Sama_3564	0.21	+1.0
4,199,217	+		Sama_3564	0.24	-0.4
4,199,279	-		Sama_3564	0.33	-0.3
4,199,400	+		Sama_3564	0.49	+1.7
4,199,400	+		Sama_3564	0.49	-1.5
4,199,426	+		Sama_3564	0.52	+0.2
4,199,426	+		Sama_3564	0.52	+0.0
4,199,427	-		Sama_3564	0.52	-0.7
4,199,464	+		Sama_3564	0.57	-0.6
4,199,464	+		Sama_3564	0.57	-1.3
4,199,475	+		Sama_3564	0.59	+0.7
4,199,476	-		Sama_3564	0.59	+0.7
4,199,531	+		Sama_3564	0.66	+0.3
4,199,532	-		Sama_3564	0.66	-0.4
4,199,532	-		Sama_3564	0.66	-0.9
4,199,546	+		Sama_3564	0.68	+0.2
4,199,547	-		Sama_3564	0.68	+2.5
4,199,547	-		Sama_3564	0.68	+0.5
4,199,547	-		Sama_3564	0.68	-0.8
4,199,677	-		Sama_3564	0.86	-1.3
4,199,691	-		Sama_3564	0.88	-0.4
4,199,691	-		Sama_3564	0.88	-2.0
4,199,691	-		Sama_3564	0.88	+0.7
4,199,759	+				-0.7
4,199,759	+				+0.5
4,199,760	-				+1.3
4,199,760	-				-1.5
4,199,760	-				+1.5
4,199,760	-				+1.3
4,199,760	-				+1.0
4,199,760	-				+1.3
4,199,789	+				-1.1
4,199,789	+				+0.5
4,199,789	+				-0.3
4,199,789	+				-0.3
4,199,790	-				+0.7
4,199,790	-				+0.5
4,199,790	-				+1.0
4,199,793	+				-0.6
4,199,793	+				+1.7
4,199,793	+				-1.7
4,199,794	-				-1.4
4,199,794	-				-1.2
4,199,794	-				-2.0
4,199,794	-				-0.3
4,199,794	-				+0.6
4,199,794	-				-0.7
4,199,794	-				-2.7
4,199,805	+				-0.1
4,199,806	-				+1.3
4,199,827	+				+1.3
4,199,827	+				-1.3
4,199,827	+				-1.1
4,199,827	+				-1.7
4,199,828	-				-0.8
4,199,842	+				+1.3
4,199,842	+				+1.0
4,199,843	-				-0.5
4,199,843	-				-1.4
4,199,843	-				-1.3
4,199,847	+				+0.0
4,199,857	+				-0.6
4,199,857	+				-0.5
4,199,858	-				-0.9
4,199,858	-				+0.2
4,199,858	-				-0.4
4,199,864	+				+0.5
4,199,864	+				-0.8
4,199,864	+				-0.8
4,199,865	-				+1.3
4,199,865	-				-2.2
4,199,865	-				+1.7
4,199,865	-				+1.3
4,199,879	+		Sama_3565	0.10	-2.6
4,199,879	+		Sama_3565	0.10	+0.7
4,199,880	-		Sama_3565	0.11	+0.7
4,199,880	-		Sama_3565	0.11	-2.1
4,199,880	-		Sama_3565	0.11	-0.6
4,199,880	-		Sama_3565	0.11	-2.0
4,199,946	+		Sama_3565	0.18	-1.7
4,199,946	+		Sama_3565	0.18	+1.2
4,199,947	-		Sama_3565	0.18	-1.0
4,199,947	-		Sama_3565	0.18	+1.3
4,199,958	-		Sama_3565	0.19	+2.7
4,199,958	+		Sama_3565	0.19	-0.1
4,199,959	-		Sama_3565	0.20	+1.2
4,199,959	-		Sama_3565	0.20	-0.9
4,199,984	+		Sama_3565	0.22	+1.3
4,199,984	+		Sama_3565	0.22	-1.0
4,199,984	+		Sama_3565	0.22	-0.1
4,199,984	+		Sama_3565	0.22	+1.3
4,199,984	+		Sama_3565	0.22	-0.1
4,199,984	+		Sama_3565	0.22	-0.1
4,199,984	+		Sama_3565	0.22	+0.6
4,199,985	-		Sama_3565	0.22	-0.6
4,199,985	-		Sama_3565	0.22	-1.2
4,199,985	-		Sama_3565	0.22	-1.0
4,199,985	-		Sama_3565	0.22	+0.0
4,199,985	-		Sama_3565	0.22	-0.1
4,199,985	-		Sama_3565	0.22	+1.0
4,199,985	-		Sama_3565	0.22	-0.3
4,199,985	-		Sama_3565	0.22	-1.8
4,199,985	-		Sama_3565	0.22	+0.2
4,199,985	-		Sama_3565	0.22	+0.5
4,199,992	+		Sama_3565	0.23	-0.7
4,200,055	-		Sama_3565	0.30	+0.5
4,200,055	-		Sama_3565	0.30	-1.4
4,200,055	-		Sama_3565	0.30	-0.4
4,200,055	-		Sama_3565	0.30	+2.5
4,200,055	-		Sama_3565	0.30	+0.0
4,200,055	-		Sama_3565	0.30	-0.1
4,200,109	+		Sama_3565	0.37	-0.8
4,200,109	+		Sama_3565	0.37	-1.0
4,200,154	+		Sama_3565	0.42	-1.5
4,200,154	+		Sama_3565	0.42	-1.1
4,200,154	+		Sama_3565	0.42	-1.8
4,200,154	+		Sama_3565	0.42	-0.6
4,200,155	-		Sama_3565	0.42	+0.7
4,200,155	-		Sama_3565	0.42	+0.1
4,200,155	-		Sama_3565	0.42	+0.0
4,200,155	-		Sama_3565	0.42	-0.3
4,200,155	-		Sama_3565	0.42	-0.4
4,200,155	-		Sama_3565	0.42	-0.9
4,200,155	-		Sama_3565	0.42	-2.3
4,200,155	-		Sama_3565	0.42	-0.3
4,200,155	-		Sama_3565	0.42	+0.3
4,200,155	-		Sama_3565	0.42	+0.2
4,200,155	-		Sama_3565	0.42	-0.6
4,200,155	-		Sama_3565	0.42	+0.2
4,200,220	+		Sama_3565	0.49	-1.4
4,200,220	+		Sama_3565	0.49	-0.3
4,200,221	-		Sama_3565	0.49	-0.8
4,200,221	-		Sama_3565	0.49	-0.5
4,200,255	+		Sama_3565	0.53	+1.3
4,200,255	+		Sama_3565	0.53	-1.8
4,200,304	+		Sama_3565	0.59	-0.6
4,200,304	+		Sama_3565	0.59	-0.1
4,200,305	-		Sama_3565	0.59	+0.5
4,200,305	-		Sama_3565	0.59	+0.2
4,200,319	+		Sama_3565	0.61	-1.7
4,200,320	-		Sama_3565	0.61	+0.3
4,200,339	+		Sama_3565	0.63	+0.3
4,200,339	+		Sama_3565	0.63	+0.6
4,200,339	+		Sama_3565	0.63	-1.1
4,200,339	+		Sama_3565	0.63	-1.5
4,200,339	+		Sama_3565	0.63	+0.0
4,200,339	+		Sama_3565	0.63	-0.3
4,200,339	+		Sama_3565	0.63	-0.6
4,200,340	-		Sama_3565	0.63	+1.3
4,200,340	-		Sama_3565	0.63	-2.0
4,200,340	-		Sama_3565	0.63	+0.4
4,200,340	-		Sama_3565	0.63	+1.0
4,200,340	-		Sama_3565	0.63	-0.1
4,200,340	-		Sama_3565	0.63	+0.3
4,200,340	-		Sama_3565	0.63	-0.8
4,200,389	-		Sama_3565	0.69	-1.9
4,200,389	-		Sama_3565	0.69	-0.3
4,200,409	-		Sama_3565	0.71	-1.0
4,200,460	+		Sama_3565	0.77	-1.4
4,200,460	+		Sama_3565	0.77	-0.1
4,200,460	+		Sama_3565	0.77	+1.3
4,200,460	+		Sama_3565	0.77	-0.6
4,200,460	+		Sama_3565	0.77	-0.8
4,200,460	+		Sama_3565	0.77	+2.6
4,200,460	+		Sama_3565	0.77	+1.5
4,200,460	+		Sama_3565	0.77	-0.4
4,200,461	-		Sama_3565	0.77	-2.3
4,200,461	-		Sama_3565	0.77	+0.2
4,200,461	-		Sama_3565	0.77	+0.9
4,200,461	-		Sama_3565	0.77	-1.0
4,200,461	-		Sama_3565	0.77	+1.0
4,200,461	-		Sama_3565	0.77	-0.8
4,200,461	-		Sama_3565	0.77	+0.0
4,200,461	-		Sama_3565	0.77	-1.8
4,200,461	-		Sama_3565	0.77	-1.1
4,200,466	+		Sama_3565	0.77	+0.5
4,200,539	-		Sama_3565	0.86	-0.2
4,200,574	+		Sama_3565	0.90	-0.4
4,200,599	+				-1.1
4,200,600	-				-0.2
4,200,600	-				+1.3
4,200,600	-				-0.7
4,200,600	-				-1.5
4,200,600	-				-0.9
4,200,614	+				-0.9
4,200,719	+				+0.3
4,200,730	+				+0.5
4,200,731	-				-0.8
4,200,749	-				-0.5