Strain Fitness in Shewanella amazonensis SB2B around Sama_3436

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,066,683	-		Sama_3435	0.48	+0.4
4,066,758	+		Sama_3435	0.53	+0.7
4,066,759	-		Sama_3435	0.53	+2.4
4,066,759	-		Sama_3435	0.53	+1.5
4,066,791	+		Sama_3435	0.55	+0.2
4,066,791	+		Sama_3435	0.55	+0.8
4,066,791	+		Sama_3435	0.55	-1.4
4,066,791	+		Sama_3435	0.55	-2.0
4,066,791	+		Sama_3435	0.55	-1.0
4,066,792	-		Sama_3435	0.55	-0.2
4,066,792	-		Sama_3435	0.55	-0.5
4,066,792	-		Sama_3435	0.55	+1.2
4,066,792	-		Sama_3435	0.55	+1.6
4,066,887	+		Sama_3435	0.62	+2.0
4,066,887	+		Sama_3435	0.62	+0.4
4,066,888	-		Sama_3435	0.62	-0.6
4,066,888	-		Sama_3435	0.62	+0.4
4,066,888	-		Sama_3435	0.62	+2.4
4,066,888	-		Sama_3435	0.62	+0.2
4,066,888	-		Sama_3435	0.62	-1.5
4,066,888	-		Sama_3435	0.62	+0.5
4,066,898	+		Sama_3435	0.62	-0.6
4,066,898	+		Sama_3435	0.62	-0.2
4,066,898	+		Sama_3435	0.62	-2.5
4,066,899	-		Sama_3435	0.63	-1.0
4,066,899	-		Sama_3435	0.63	+0.2
4,066,992	+		Sama_3435	0.69	+0.1
4,066,992	+		Sama_3435	0.69	-0.9
4,066,992	+		Sama_3435	0.69	-0.5
4,066,992	+		Sama_3435	0.69	+0.4
4,066,992	+		Sama_3435	0.69	-1.1
4,067,006	-		Sama_3435	0.70	-0.7
4,067,010	+		Sama_3435	0.70	+0.7
4,067,011	-		Sama_3435	0.70	+0.9
4,067,011	-		Sama_3435	0.70	+1.0
4,067,044	+		Sama_3435	0.72	-0.3
4,067,044	+		Sama_3435	0.72	-1.2
4,067,045	-		Sama_3435	0.72	-0.9
4,067,045	-		Sama_3435	0.72	+2.2
4,067,045	-		Sama_3435	0.72	+0.8
4,067,045	-		Sama_3435	0.72	-1.2
4,067,094	+		Sama_3435	0.75	-1.5
4,067,095	-		Sama_3435	0.75	-1.5
4,067,095	-		Sama_3435	0.75	+1.6
4,067,095	-		Sama_3435	0.75	-2.6
4,067,095	-		Sama_3435	0.75	-1.7
4,067,095	-		Sama_3435	0.75	-0.1
4,067,095	-		Sama_3435	0.75	+0.4
4,067,095	-		Sama_3435	0.75	-1.4
4,067,097	+		Sama_3435	0.76	+0.5
4,067,097	+		Sama_3435	0.76	+2.1
4,067,097	+		Sama_3435	0.76	+3.4
4,067,097	+		Sama_3435	0.76	-0.9
4,067,097	+		Sama_3435	0.76	-1.6
4,067,097	+		Sama_3435	0.76	-1.7
4,067,097	+		Sama_3435	0.76	+0.4
4,067,097	+		Sama_3435	0.76	+0.8
4,067,097	+		Sama_3435	0.76	-0.7
4,067,097	+		Sama_3435	0.76	-0.0
4,067,097	+		Sama_3435	0.76	+0.2
4,067,097	+		Sama_3435	0.76	+1.9
4,067,097	+		Sama_3435	0.76	+1.2
4,067,097	+		Sama_3435	0.76	-0.7
4,067,097	+		Sama_3435	0.76	-1.7
4,067,098	-		Sama_3435	0.76	+0.9
4,067,098	-		Sama_3435	0.76	+0.4
4,067,098	-		Sama_3435	0.76	-0.2
4,067,098	-		Sama_3435	0.76	-0.3
4,067,098	-		Sama_3435	0.76	-0.0
4,067,098	-		Sama_3435	0.76	-0.2
4,067,098	-		Sama_3435	0.76	+0.8
4,067,098	-		Sama_3435	0.76	+0.5
4,067,098	-		Sama_3435	0.76	-0.7
4,067,098	-		Sama_3435	0.76	+0.0
4,067,129	+		Sama_3435	0.78	-0.3
4,067,129	+		Sama_3435	0.78	+1.0
4,067,129	+		Sama_3435	0.78	-1.6
4,067,129	+		Sama_3435	0.78	-1.2
4,067,129	+		Sama_3435	0.78	+0.0
4,067,129	+		Sama_3435	0.78	+0.0
4,067,129	+		Sama_3435	0.78	-0.1
4,067,130	-		Sama_3435	0.78	-0.2
4,067,177	+		Sama_3435	0.81	+0.2
4,067,177	+		Sama_3435	0.81	-0.4
4,067,177	+		Sama_3435	0.81	+0.6
4,067,178	-		Sama_3435	0.81	+0.0
4,067,229	+		Sama_3435	0.84	+0.3
4,067,230	-		Sama_3435	0.84	-0.3
4,067,230	-		Sama_3435	0.84	-1.0
4,067,315	+		Sama_3435	0.90	+1.4
4,067,315	+		Sama_3435	0.90	-1.6
4,067,316	-		Sama_3435	0.90	+1.0
4,067,316	-		Sama_3435	0.90	-0.3
4,067,322	+				+0.4
4,067,323	-				-1.0
4,067,358	+				-0.8
4,067,358	+				-0.7
4,067,359	-				+2.1
4,067,360	+				-1.1
4,067,361	-				+0.3
4,067,428	+				-2.3
4,067,429	-				+0.3
4,067,429	-				-1.0
4,067,466	+				+0.4
4,067,466	+				+0.8
4,067,516	-				+1.4
4,067,518	+				+0.1
4,067,519	-				+1.0
4,067,519	-				+1.0
4,067,550	+				+0.7
4,067,562	-				-0.3
4,067,568	-				-0.0
4,067,582	-				-0.2
4,067,586	+				+0.6
4,067,586	+				-0.2
4,067,587	-				-0.7
4,067,595	-				+1.0
4,067,679	+				+0.8
4,067,680	-				-2.1
4,067,715	-				-1.6
4,067,772	+		Sama_3436	0.15	-0.6
4,067,772	+		Sama_3436	0.15	+1.0
4,067,772	+		Sama_3436	0.15	+0.3
4,067,772	+		Sama_3436	0.15	-0.6
4,067,773	-		Sama_3436	0.15	-2.4
4,067,773	-		Sama_3436	0.15	+0.5
4,067,773	-		Sama_3436	0.15	-0.1
4,067,773	-		Sama_3436	0.15	-0.5
4,067,773	-		Sama_3436	0.15	+0.2
4,067,773	-		Sama_3436	0.15	+0.8
4,067,852	+		Sama_3436	0.22	-1.2
4,067,882	+		Sama_3436	0.25	+0.3
4,067,883	-		Sama_3436	0.25	+0.7
4,067,883	-		Sama_3436	0.25	+0.2
4,067,911	+		Sama_3436	0.28	+0.4
4,067,911	+		Sama_3436	0.28	-0.2
4,067,912	-		Sama_3436	0.28	+0.8
4,067,912	-		Sama_3436	0.28	+1.8
4,067,912	-		Sama_3436	0.28	+1.4
4,068,057	-		Sama_3436	0.42	+0.6
4,068,111	+		Sama_3436	0.47	-1.9
4,068,112	-		Sama_3436	0.47	+1.0
4,068,112	-		Sama_3436	0.47	+2.0
4,068,112	-		Sama_3436	0.47	-1.3
4,068,112	-		Sama_3436	0.47	+0.5
4,068,112	-		Sama_3436	0.47	-1.2
4,068,250	+		Sama_3436	0.61	-0.6
4,068,278	+		Sama_3436	0.63	+1.0
4,068,278	+		Sama_3436	0.63	+0.8
4,068,279	-		Sama_3436	0.63	+0.0
4,068,279	-		Sama_3436	0.63	+0.1
4,068,315	+		Sama_3436	0.67	-1.7
4,068,315	+		Sama_3436	0.67	+1.0
4,068,358	+		Sama_3436	0.71	+0.8
4,068,359	-		Sama_3436	0.71	+1.3
4,068,406	+		Sama_3436	0.75	+0.2
4,068,406	+		Sama_3436	0.75	+0.6
4,068,406	+		Sama_3436	0.75	-0.4
4,068,407	-		Sama_3436	0.76	-1.6
4,068,407	-		Sama_3436	0.76	-0.5
4,068,408	+		Sama_3436	0.76	-1.6
4,068,409	-		Sama_3436	0.76	-1.9
4,068,409	-		Sama_3436	0.76	+1.8
4,068,409	-		Sama_3436	0.76	-0.3
4,068,409	-		Sama_3436	0.76	-0.1
4,068,409	-		Sama_3436	0.76	-2.7
4,068,436	+		Sama_3436	0.78	-0.8
4,068,436	+		Sama_3436	0.78	+1.5
4,068,437	-		Sama_3436	0.78	+0.0
4,068,440	+		Sama_3436	0.79	-1.8
4,068,440	+		Sama_3436	0.79	-0.7
4,068,440	+		Sama_3436	0.79	+1.8
4,068,440	+		Sama_3436	0.79	-0.2
4,068,440	+		Sama_3436	0.79	+0.5
4,068,440	+		Sama_3436	0.79	+0.9
4,068,440	+		Sama_3436	0.79	+0.0
4,068,440	+		Sama_3436	0.79	-0.9
4,068,440	+		Sama_3436	0.79	-0.3
4,068,441	-		Sama_3436	0.79	+0.4
4,068,441	-		Sama_3436	0.79	+0.5
4,068,441	-		Sama_3436	0.79	-0.5
4,068,441	-		Sama_3436	0.79	+0.8
4,068,441	-		Sama_3436	0.79	-0.1
4,068,441	-		Sama_3436	0.79	+0.2
4,068,441	-		Sama_3436	0.79	-1.3
4,068,441	-		Sama_3436	0.79	+0.2
4,068,441	-		Sama_3436	0.79	-0.2
4,068,483	+		Sama_3436	0.83	+1.4
4,068,484	-		Sama_3436	0.83	-1.4
4,068,541	+		Sama_3436	0.88	+0.2
4,068,541	+		Sama_3436	0.88	+0.8
4,068,541	+		Sama_3436	0.88	+0.4
4,068,542	-		Sama_3436	0.89	-1.6
4,068,542	-		Sama_3436	0.89	-1.8
4,068,542	-		Sama_3436	0.89	+0.0
4,068,549	+		Sama_3436	0.89	+0.2
4,068,549	+		Sama_3436	0.89	+1.0
4,068,550	-		Sama_3436	0.89	-1.5
4,068,571	+				-0.3
4,068,572	-				+0.3
4,068,572	-				-1.2
4,068,573	+				-1.2
4,068,573	+				-0.3
4,068,573	+				+1.4
4,068,573	+				-0.6
4,068,573	+				-1.5
4,068,573	+				-0.1
4,068,573	+				+0.7
4,068,574	-				+0.0
4,068,574	-				+1.0
4,068,574	-				+0.5
4,068,574	-				-0.6
4,068,574	-				+0.1
4,068,583	+				+0.4
4,068,584	-				-1.6
4,068,724	-		Sama_3437	0.11	-0.8
4,068,749	+		Sama_3437	0.15	+1.5
4,068,749	+		Sama_3437	0.15	-0.3
4,068,749	+		Sama_3437	0.15	+0.8
4,068,749	+		Sama_3437	0.15	+0.4
4,068,749	+		Sama_3437	0.15	-0.9
4,068,749	+		Sama_3437	0.15	+0.9
4,068,749	+		Sama_3437	0.15	+2.1
4,068,750	-		Sama_3437	0.15	+0.8
4,068,750	-		Sama_3437	0.15	+0.1
4,068,750	-		Sama_3437	0.15	-0.8
4,068,750	-		Sama_3437	0.15	+1.0
4,068,750	-		Sama_3437	0.15	-0.1
4,068,750	-		Sama_3437	0.15	-0.3
4,068,750	-		Sama_3437	0.15	+0.4
4,068,750	-		Sama_3437	0.15	-0.8
4,068,750	-		Sama_3437	0.15	+0.7
4,068,750	-		Sama_3437	0.15	-0.2
4,068,821	+		Sama_3437	0.27	+0.3
4,068,821	+		Sama_3437	0.27	+0.0
4,068,821	+		Sama_3437	0.27	+0.0
4,068,821	+		Sama_3437	0.27	-0.7
4,068,822	-		Sama_3437	0.27	+1.6
4,068,822	-		Sama_3437	0.27	+0.2
4,068,822	-		Sama_3437	0.27	-0.5
4,068,822	-		Sama_3437	0.27	-1.7
4,068,822	-		Sama_3437	0.27	+1.0
4,068,822	-		Sama_3437	0.27	+1.4
4,068,822	-		Sama_3437	0.27	+1.4
4,068,849	-		Sama_3437	0.31	-0.6
4,068,849	-		Sama_3437	0.31	-0.7
4,068,849	-		Sama_3437	0.31	-1.8
4,068,849	-		Sama_3437	0.31	-2.0
4,068,871	-		Sama_3437	0.35	+0.2
4,068,880	-		Sama_3437	0.36	-1.5
4,068,919	-		Sama_3437	0.43	-1.4
4,068,919	-		Sama_3437	0.43	+1.1
4,068,919	-		Sama_3437	0.43	+0.4
4,068,919	-		Sama_3437	0.43	-0.1
4,068,919	-		Sama_3437	0.43	+1.0
4,068,993	-		Sama_3437	0.55	+0.6
4,069,009	+		Sama_3437	0.57	+0.2
4,069,009	+		Sama_3437	0.57	-0.8
4,069,010	-		Sama_3437	0.58	-1.0
4,069,010	-		Sama_3437	0.58	+0.1
4,069,020	+		Sama_3437	0.59	+0.2
4,069,063	+		Sama_3437	0.66	-0.6
4,069,220	+				+1.4
4,069,220	+				+1.0
4,069,221	-				-1.1
4,069,221	-				+0.0
4,069,221	-				+0.1
4,069,221	-				+1.1
4,069,221	-				+0.7
4,069,284	+				+0.5
4,069,284	+				-1.6
4,069,285	-				-0.5
4,069,378	+		Sama_3438	0.23	+0.5
4,069,378	+		Sama_3438	0.23	+0.0
4,069,379	-		Sama_3438	0.23	+0.4
4,069,379	-		Sama_3438	0.23	+0.4
4,069,379	-		Sama_3438	0.23	-0.6
4,069,379	-		Sama_3438	0.23	-2.5
4,069,379	-		Sama_3438	0.23	+0.2
4,069,515	+		Sama_3438	0.53	+0.7
4,069,515	+		Sama_3438	0.53	-0.7
4,069,516	-		Sama_3438	0.53	-1.6
4,069,516	-		Sama_3438	0.53	-0.5
4,069,536	+		Sama_3438	0.58	-1.3
4,069,536	+		Sama_3438	0.58	+1.3
4,069,536	+		Sama_3438	0.58	+1.5
4,069,536	+		Sama_3438	0.58	+0.0
4,069,574	+		Sama_3438	0.66	-1.3
4,069,574	+		Sama_3438	0.66	+0.4
4,069,575	-		Sama_3438	0.66	-1.9
4,069,575	-		Sama_3438	0.66	-0.1
4,069,575	-		Sama_3438	0.66	-2.1
4,069,575	-		Sama_3438	0.66	+0.0