Strain Fitness in Shewanella amazonensis SB2B around Sama_3130

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,714,271	+		Sama_3129	0.79	+1.5
3,714,346	+		Sama_3129	0.81	+5.1
3,714,515	-		Sama_3129	0.86	+4.1
3,714,728	-				+1.1
3,714,964	-				+1.5
3,714,974	-				+5.2
3,714,980	-				+0.8
3,714,980	-				+1.1
3,714,980	-				+0.3
3,715,107	+				-0.3
3,715,109	+				-1.0
3,715,109	+				+0.3
3,715,109	+				-0.0
3,715,109	+				-0.5
3,715,110	-				-0.7
3,715,110	-				-1.1
3,715,110	-				+0.3
3,715,110	-				+0.2
3,715,110	-				-0.1
3,715,110	-				-0.4
3,715,110	-				-0.6
3,715,110	-				-0.8
3,715,113	-				+0.8
3,715,113	-				+1.1
3,715,113	-				-2.1
3,715,143	-				-0.4
3,715,143	-				-0.3
3,715,143	-				+0.2
3,715,188	+				+0.4
3,715,189	-				-0.8
3,715,189	-				-0.8
3,715,246	+				+0.3
3,715,246	+				-0.8
3,715,246	+				+1.1
3,715,246	+				-1.9
3,715,246	+				-1.0
3,715,247	-				+0.5
3,715,247	-				-2.1
3,715,247	-				+0.1
3,715,247	-				-0.1
3,715,301	-				+0.8
3,715,345	+				-0.6
3,715,345	+				-0.3
3,715,345	+				-0.6
3,715,345	+				-0.5
3,715,345	+				-1.5
3,715,345	+				-2.2
3,715,345	+				-0.5
3,715,346	-				-0.7
3,715,346	-				-0.1
3,715,346	-				-0.5
3,715,346	-				-0.1
3,715,346	-				-0.6
3,715,346	-				-0.3
3,715,346	-				+0.8
3,715,346	-				-0.1
3,715,346	-				-0.7
3,715,346	-				-1.0
3,715,346	-				+1.2
3,715,346	-				-0.1
3,715,346	-				+0.8
3,715,346	-				+1.5
3,715,346	-				-1.4
3,715,375	+				-0.5
3,715,376	-				+1.8
3,715,376	-				+0.2
3,715,376	-				-1.1
3,715,386	+		Sama_3130	0.10	-0.6
3,715,386	+		Sama_3130	0.10	-2.2
3,715,386	+		Sama_3130	0.10	+1.8
3,715,386	+		Sama_3130	0.10	-0.5
3,715,386	+		Sama_3130	0.10	+0.2
3,715,387	-		Sama_3130	0.10	+0.8
3,715,387	-		Sama_3130	0.10	-1.1
3,715,401	-		Sama_3130	0.11	-0.4
3,715,412	+		Sama_3130	0.12	-1.7
3,715,412	+		Sama_3130	0.12	+1.5
3,715,412	+		Sama_3130	0.12	-0.7
3,715,412	+		Sama_3130	0.12	-0.8
3,715,412	+		Sama_3130	0.12	-1.8
3,715,413	-		Sama_3130	0.12	-1.6
3,715,413	-		Sama_3130	0.12	-0.5
3,715,494	+		Sama_3130	0.18	-1.2
3,715,495	-		Sama_3130	0.18	-2.3
3,715,547	+		Sama_3130	0.22	-0.8
3,715,567	+		Sama_3130	0.23	-2.6
3,715,567	+		Sama_3130	0.23	-0.3
3,715,567	+		Sama_3130	0.23	+1.5
3,715,567	+		Sama_3130	0.23	-0.1
3,715,567	+		Sama_3130	0.23	+0.0
3,715,567	+		Sama_3130	0.23	+0.8
3,715,567	+		Sama_3130	0.23	+0.9
3,715,568	-		Sama_3130	0.23	-0.3
3,715,568	-		Sama_3130	0.23	-0.0
3,715,568	-		Sama_3130	0.23	-1.7
3,715,568	-		Sama_3130	0.23	+0.4
3,715,568	-		Sama_3130	0.23	+0.5
3,715,568	-		Sama_3130	0.23	-0.3
3,715,568	-		Sama_3130	0.23	+0.5
3,715,568	-		Sama_3130	0.23	-0.3
3,715,590	+		Sama_3130	0.25	+0.8
3,715,590	+		Sama_3130	0.25	-1.2
3,715,591	-		Sama_3130	0.25	-0.5
3,715,591	-		Sama_3130	0.25	+1.1
3,715,716	+		Sama_3130	0.34	-0.5
3,715,716	+		Sama_3130	0.34	-1.3
3,715,716	+		Sama_3130	0.34	+0.1
3,715,717	-		Sama_3130	0.34	-0.7
3,715,729	+		Sama_3130	0.35	-1.5
3,715,729	+		Sama_3130	0.35	-0.7
3,715,730	-		Sama_3130	0.35	+0.9
3,715,784	+		Sama_3130	0.39	-0.9
3,715,805	+		Sama_3130	0.40	-0.2
3,715,806	-		Sama_3130	0.40	-1.4
3,715,824	-		Sama_3130	0.42	+1.7
3,715,861	+		Sama_3130	0.44	+0.9
3,715,861	+		Sama_3130	0.44	+0.6
3,715,862	-		Sama_3130	0.44	-0.8
3,715,862	-		Sama_3130	0.44	-0.0
3,715,862	-		Sama_3130	0.44	+0.0
3,715,862	-		Sama_3130	0.44	-1.0
3,715,879	-		Sama_3130	0.46	+0.1
3,715,926	+		Sama_3130	0.49	+0.9
3,715,926	+		Sama_3130	0.49	+0.1
3,715,926	+		Sama_3130	0.49	-0.3
3,715,926	+		Sama_3130	0.49	-0.5
3,715,927	-		Sama_3130	0.49	-3.1
3,715,927	-		Sama_3130	0.49	-0.3
3,715,941	-		Sama_3130	0.50	-0.2
3,715,989	-		Sama_3130	0.53	-1.1
3,715,993	+		Sama_3130	0.54	+2.1
3,715,993	+		Sama_3130	0.54	-1.5
3,715,993	+		Sama_3130	0.54	-0.7
3,715,994	-		Sama_3130	0.54	-1.3
3,715,994	-		Sama_3130	0.54	+0.6
3,715,994	-		Sama_3130	0.54	-0.7
3,716,005	+		Sama_3130	0.55	-1.2
3,716,005	+		Sama_3130	0.55	+1.2
3,716,005	+		Sama_3130	0.55	+1.5
3,716,005	+		Sama_3130	0.55	-0.9
3,716,006	-		Sama_3130	0.55	-1.1
3,716,006	-		Sama_3130	0.55	-1.8
3,716,006	-		Sama_3130	0.55	-1.2
3,716,006	-		Sama_3130	0.55	-1.7
3,716,031	-		Sama_3130	0.56	+1.5
3,716,031	-		Sama_3130	0.56	+0.3
3,716,048	+		Sama_3130	0.58	+0.6
3,716,048	+		Sama_3130	0.58	+1.1
3,716,070	-		Sama_3130	0.59	-1.3
3,716,102	+		Sama_3130	0.62	-0.3
3,716,103	-		Sama_3130	0.62	+0.1
3,716,130	+		Sama_3130	0.64	+0.8
3,716,130	+		Sama_3130	0.64	+0.4
3,716,130	+		Sama_3130	0.64	-1.2
3,716,130	+		Sama_3130	0.64	+0.0
3,716,131	-		Sama_3130	0.64	+1.8
3,716,141	+		Sama_3130	0.64	-0.1
3,716,141	+		Sama_3130	0.64	+0.1
3,716,142	-		Sama_3130	0.64	-0.1
3,716,151	-		Sama_3130	0.65	+0.7
3,716,162	+		Sama_3130	0.66	+0.1
3,716,163	-		Sama_3130	0.66	+1.5
3,716,163	-		Sama_3130	0.66	+1.5
3,716,167	+		Sama_3130	0.66	-1.5
3,716,167	+		Sama_3130	0.66	-0.3
3,716,168	-		Sama_3130	0.66	-0.2
3,716,168	-		Sama_3130	0.66	+0.1
3,716,175	+		Sama_3130	0.67	+0.3
3,716,175	+		Sama_3130	0.67	-1.4
3,716,175	+		Sama_3130	0.67	+0.3
3,716,176	-		Sama_3130	0.67	-0.5
3,716,176	-		Sama_3130	0.67	-0.9
3,716,187	-		Sama_3130	0.68	-0.2
3,716,204	+		Sama_3130	0.69	-1.2
3,716,204	+		Sama_3130	0.69	+0.1
3,716,213	+		Sama_3130	0.70	-0.2
3,716,213	+		Sama_3130	0.70	-1.1
3,716,214	-		Sama_3130	0.70	-0.3
3,716,214	-		Sama_3130	0.70	+0.1
3,716,214	-		Sama_3130	0.70	-1.0
3,716,214	-		Sama_3130	0.70	-0.4
3,716,235	+		Sama_3130	0.71	+0.1
3,716,235	+		Sama_3130	0.71	+0.3
3,716,236	-		Sama_3130	0.71	+2.0
3,716,265	+		Sama_3130	0.73	-1.1
3,716,265	+		Sama_3130	0.73	+0.5
3,716,265	+		Sama_3130	0.73	+1.5
3,716,266	-		Sama_3130	0.73	-1.0
3,716,266	-		Sama_3130	0.73	-0.1
3,716,286	-		Sama_3130	0.75	-0.2
3,716,300	+		Sama_3130	0.76	-0.6
3,716,411	+		Sama_3130	0.84	-1.1
3,716,412	-		Sama_3130	0.84	-0.9
3,716,495	+		Sama_3130	0.90	-1.1
3,716,504	+				-0.5
3,716,504	+				+0.7
3,716,504	+				+0.1
3,716,504	+				-1.3
3,716,505	-				+0.6
3,716,505	-				+0.5
3,716,534	+				+0.8
3,716,534	+				-0.9
3,716,534	+				+0.1
3,716,534	+				-0.7
3,716,534	+				-1.1
3,716,535	-				-1.1
3,716,541	+				+0.7
3,716,541	+				+0.3
3,716,541	+				-0.5
3,716,541	+				+0.2
3,716,542	-				-0.1
3,716,542	-				-0.7
3,716,566	+				-0.5
3,716,567	-				+0.4
3,716,589	+				+0.1
3,716,589	+				-1.0
3,716,589	+				+0.2
3,716,589	+				+0.9
3,716,589	+				+0.5
3,716,590	-				-0.8
3,716,590	-				-2.2
3,716,590	-				-1.1
3,716,590	-				-0.3
3,716,607	+				+0.5
3,716,607	+				-0.5
3,716,607	+				+2.1
3,716,608	-				-0.9
3,716,652	-				-1.0
3,716,652	-				-1.1
3,716,659	+				-0.5
3,716,659	+				+1.8
3,716,659	+				+0.4
3,716,659	+				-1.8
3,716,660	-				-0.6
3,716,660	-				-0.2
3,716,660	-				+1.1
3,716,660	-				-0.6
3,716,660	-				-1.0
3,716,670	+				+0.5
3,716,670	+				+0.3
3,716,671	-				-0.2
3,716,671	-				-2.3
3,716,671	-				+0.2
3,716,671	-				+0.7
3,716,671	-				+2.1
3,716,671	-				+0.8
3,716,671	-				-1.6
3,716,732	+				+2.4
3,716,733	-				-0.3
3,716,733	-				+0.4
3,716,761	+				+0.0
3,716,761	+				-0.7
3,716,762	-				+1.1
3,716,762	-				+1.2
3,716,764	+				-1.0
3,716,765	-				+0.1
3,716,829	+				+0.3
3,716,879	+				-0.6
3,716,879	+				+1.5
3,716,879	+				-1.4
3,716,879	+				+1.2
3,716,879	+				+1.8
3,716,880	-				-2.1
3,716,880	-				-1.3
3,716,880	-				-1.1
3,716,880	-				+1.5
3,716,893	+				-0.2
3,716,894	-				+0.3
3,716,894	-				-0.1
3,716,908	+				-0.7
3,716,908	+				+0.3
3,716,908	+				+1.5
3,716,908	+				-0.3
3,716,908	+				-0.7
3,716,908	+				+0.6
3,716,908	+				+0.3
3,716,909	-				+0.1
3,716,909	-				-0.7
3,716,909	-				-0.5
3,716,909	-				+0.4
3,716,910	+				-0.1
3,716,910	+				+2.1
3,716,910	+				+0.1
3,716,910	+				+0.3
3,716,911	-				+0.5
3,716,911	-				-1.2
3,716,911	-				-0.3
3,716,915	+				+0.1
3,716,915	+				-0.2
3,716,915	+				-0.0
3,716,915	+				+0.6
3,716,916	-				+0.4
3,716,916	-				+0.1
3,716,916	-				+0.3
3,716,916	-				-0.3
3,716,916	-				-0.1
3,716,916	-				+0.0
3,716,916	-				+0.5
3,716,926	+				+0.5
3,716,927	-				+0.5
3,716,927	-				+1.1
3,716,927	-				+1.1
3,716,927	-				+1.1
3,716,951	+				+0.7
3,716,951	+				+2.4
3,716,951	+				+2.1
3,716,951	+				-1.4
3,716,952	-				+1.0
3,716,952	-				-1.0
3,716,952	-				-1.1
3,716,952	-				-0.3
3,716,952	-				-0.7
3,716,952	-				+0.5
3,716,952	-				-0.4
3,716,952	-				-0.6
3,716,990	+				+0.2
3,717,028	+				-1.4
3,717,028	+				-1.6
3,717,029	-				-1.9
3,717,029	-				-0.1
3,717,044	+				-0.8
3,717,117	+				+0.8
3,717,117	+				-0.2
3,717,117	+				-0.1
3,717,117	+				+0.1
3,717,117	+				-0.5
3,717,117	+				-0.9
3,717,118	-				+2.1
3,717,118	-				-0.7
3,717,118	-				-1.8
3,717,119	+				-0.8
3,717,184	+				+1.4
3,717,184	+				+0.5
3,717,197	-				-1.8
3,717,202	-				-1.0
3,717,266	+		Sama_3131	0.11	+1.4
3,717,266	+		Sama_3131	0.11	+1.7
3,717,266	+		Sama_3131	0.11	+0.7
3,717,266	+		Sama_3131	0.11	+1.5
3,717,267	-		Sama_3131	0.11	+2.0
3,717,297	+		Sama_3131	0.12	-0.7
3,717,298	-		Sama_3131	0.12	+0.9
3,717,339	+		Sama_3131	0.13	-1.7
3,717,339	+		Sama_3131	0.13	-0.2
3,717,340	-		Sama_3131	0.13	-0.3
3,717,340	-		Sama_3131	0.13	+0.8
3,717,340	-		Sama_3131	0.13	+0.5
3,717,414	-		Sama_3131	0.16	+0.8
3,717,469	+		Sama_3131	0.18	-0.0
3,717,469	+		Sama_3131	0.18	+1.1
3,717,498	-		Sama_3131	0.19	+0.8
3,717,521	+		Sama_3131	0.19	+0.4
3,717,522	-		Sama_3131	0.20	+0.5
3,717,522	-		Sama_3131	0.20	-0.1
3,717,559	+		Sama_3131	0.21	+2.1
3,717,560	-		Sama_3131	0.21	-0.2
3,717,568	+		Sama_3131	0.21	+0.5
3,717,568	+		Sama_3131	0.21	-0.1
3,717,569	-		Sama_3131	0.21	+0.3
3,717,569	-		Sama_3131	0.21	+0.0