Strain Fitness in Shewanella amazonensis SB2B around Sama_3034

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,610,772	+				+1.7
3,610,772	+				+0.8
3,610,772	+				-0.4
3,610,773	-				+1.6
3,610,784	+				-0.5
3,610,852	+		Sama_3035	0.13	-1.5
3,610,936	+		Sama_3035	0.22	-1.2
3,610,936	+		Sama_3035	0.22	-0.5
3,610,937	-		Sama_3035	0.22	+0.9
3,610,988	-		Sama_3035	0.28	+0.2
3,610,988	-		Sama_3035	0.28	-2.3
3,610,998	+		Sama_3035	0.29	-1.7
3,610,999	-		Sama_3035	0.29	-0.8
3,611,021	+		Sama_3035	0.32	-0.0
3,611,066	+		Sama_3035	0.37	-0.5
3,611,066	+		Sama_3035	0.37	+0.1
3,611,067	-		Sama_3035	0.37	-0.2
3,611,067	-		Sama_3035	0.37	-1.7
3,611,126	+		Sama_3035	0.44	+1.6
3,611,126	+		Sama_3035	0.44	-1.2
3,611,148	+		Sama_3035	0.46	-0.7
3,611,149	-		Sama_3035	0.46	-2.2
3,611,175	+		Sama_3035	0.49	+1.0
3,611,175	+		Sama_3035	0.49	+0.3
3,611,176	-		Sama_3035	0.49	-0.4
3,611,176	-		Sama_3035	0.49	+0.1
3,611,178	+		Sama_3035	0.50	-0.8
3,611,178	+		Sama_3035	0.50	-0.0
3,611,178	+		Sama_3035	0.50	-2.4
3,611,179	-		Sama_3035	0.50	-0.4
3,611,179	-		Sama_3035	0.50	-0.1
3,611,261	-		Sama_3035	0.59	-0.3
3,611,284	+		Sama_3035	0.62	-0.5
3,611,284	+		Sama_3035	0.62	+0.3
3,611,284	+		Sama_3035	0.62	+1.8
3,611,285	-		Sama_3035	0.62	-0.4
3,611,285	-		Sama_3035	0.62	-0.2
3,611,285	-		Sama_3035	0.62	-0.7
3,611,285	-		Sama_3035	0.62	-1.0
3,611,285	-		Sama_3035	0.62	-1.6
3,611,345	+		Sama_3035	0.68	-0.1
3,611,345	+		Sama_3035	0.68	-2.4
3,611,345	+		Sama_3035	0.68	-0.2
3,611,346	-		Sama_3035	0.69	-1.2
3,611,435	+		Sama_3035	0.79	+0.8
3,611,436	-		Sama_3035	0.79	-0.2
3,611,479	+		Sama_3035	0.84	+0.2
3,611,480	-		Sama_3035	0.84	-0.5
3,611,537	+				+1.0
3,611,537	+				-0.1
3,611,538	-				-0.3
3,611,538	-				+0.6
3,611,538	-				-0.9
3,611,538	-				-0.5
3,611,538	-				+1.7
3,611,555	+				-0.6
3,611,569	+				-1.8
3,611,570	-				-1.8
3,611,615	+				+2.2
3,611,616	-				-0.4
3,611,616	-				-0.7
3,611,625	+				+1.0
3,611,625	+				+1.3
3,611,625	+				-0.8
3,611,625	+				+0.2
3,611,625	+				+0.2
3,611,625	+				-1.2
3,611,626	-				-1.1
3,611,626	-				-0.2
3,611,626	-				+1.2
3,611,648	-				-1.3
3,611,648	-				+0.2