Strain Fitness in Shewanella amazonensis SB2B around Sama_3027

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,600,032	-				+0.8
3,600,111	-				-0.8
3,600,983	-				+1.2
3,600,990	+				+1.2
3,600,991	-				+0.8
3,600,991	-				+0.2
3,600,991	-				-0.3
3,600,991	-				+0.2
3,600,991	-				-0.0
3,600,991	-				+3.2
3,600,991	-				-0.4
3,600,991	-				+1.0
3,600,991	-				-0.4
3,601,035	-				+0.7
3,601,065	-				-0.1
3,601,150	-				+6.3
3,601,156	-				-1.7
3,601,208	-	mutL	Sama_3027	0.12	+0.3
3,601,240	+	mutL	Sama_3027	0.14	+2.0
3,601,241	-	mutL	Sama_3027	0.14	+1.2
3,601,296	+	mutL	Sama_3027	0.17	-0.2
3,601,296	+	mutL	Sama_3027	0.17	-0.8
3,601,297	-	mutL	Sama_3027	0.17	+0.2
3,601,377	+	mutL	Sama_3027	0.21	+7.6
3,601,380	+	mutL	Sama_3027	0.21	-0.2
3,601,380	+	mutL	Sama_3027	0.21	-0.0
3,601,380	+	mutL	Sama_3027	0.21	-0.0
3,601,380	+	mutL	Sama_3027	0.21	+0.3
3,601,381	-	mutL	Sama_3027	0.21	+1.0
3,601,390	-	mutL	Sama_3027	0.21	-0.0
3,601,415	+	mutL	Sama_3027	0.23	-0.7
3,601,416	-	mutL	Sama_3027	0.23	+1.3
3,601,518	+	mutL	Sama_3027	0.28	-0.7
3,601,518	+	mutL	Sama_3027	0.28	+1.3
3,601,549	+	mutL	Sama_3027	0.30	+0.1
3,601,549	+	mutL	Sama_3027	0.30	+0.6
3,601,550	-	mutL	Sama_3027	0.30	+0.7
3,601,550	-	mutL	Sama_3027	0.30	+0.6
3,601,550	-	mutL	Sama_3027	0.30	+0.7
3,601,550	-	mutL	Sama_3027	0.30	+1.2
3,601,553	-	mutL	Sama_3027	0.30	-0.0
3,601,597	+	mutL	Sama_3027	0.32	-1.8
3,601,597	+	mutL	Sama_3027	0.32	+0.2
3,601,597	+	mutL	Sama_3027	0.32	-0.6
3,601,597	+	mutL	Sama_3027	0.32	+0.6
3,601,597	+	mutL	Sama_3027	0.32	-1.7
3,601,597	+	mutL	Sama_3027	0.32	-1.3
3,601,598	-	mutL	Sama_3027	0.32	+0.6
3,601,598	-	mutL	Sama_3027	0.32	+0.2
3,601,598	-	mutL	Sama_3027	0.32	+3.2
3,601,598	-	mutL	Sama_3027	0.32	-0.3
3,601,598	-	mutL	Sama_3027	0.32	+0.4
3,601,598	-	mutL	Sama_3027	0.32	+9.0
3,601,598	-	mutL	Sama_3027	0.32	+1.4
3,601,598	-	mutL	Sama_3027	0.32	+0.3
3,601,598	-	mutL	Sama_3027	0.32	-0.3
3,601,598	-	mutL	Sama_3027	0.32	+4.7
3,601,598	-	mutL	Sama_3027	0.32	-1.2
3,601,624	+	mutL	Sama_3027	0.33	+1.0
3,601,625	-	mutL	Sama_3027	0.33	+1.6
3,601,739	+	mutL	Sama_3027	0.39	+0.1
3,601,739	+	mutL	Sama_3027	0.39	-1.4
3,601,739	+	mutL	Sama_3027	0.39	-0.3
3,601,740	-	mutL	Sama_3027	0.39	-0.2
3,601,740	-	mutL	Sama_3027	0.39	+1.7
3,601,802	+	mutL	Sama_3027	0.42	+1.0
3,601,802	+	mutL	Sama_3027	0.42	+0.7
3,601,802	+	mutL	Sama_3027	0.42	+1.9
3,601,841	+	mutL	Sama_3027	0.44	+0.5
3,601,842	-	mutL	Sama_3027	0.45	-0.7
3,601,842	-	mutL	Sama_3027	0.45	+3.6
3,601,847	+	mutL	Sama_3027	0.45	-0.5
3,601,847	+	mutL	Sama_3027	0.45	-2.4
3,601,847	+	mutL	Sama_3027	0.45	-0.8
3,601,848	-	mutL	Sama_3027	0.45	+0.9
3,601,848	-	mutL	Sama_3027	0.45	-0.5
3,601,849	+	mutL	Sama_3027	0.45	+1.9
3,601,849	+	mutL	Sama_3027	0.45	-1.5
3,601,849	+	mutL	Sama_3027	0.45	-0.8
3,601,850	-	mutL	Sama_3027	0.45	-0.0
3,601,850	-	mutL	Sama_3027	0.45	-0.3
3,601,850	-	mutL	Sama_3027	0.45	-1.1
3,601,850	-	mutL	Sama_3027	0.45	+1.4
3,601,850	-	mutL	Sama_3027	0.45	+0.2
3,601,868	+	mutL	Sama_3027	0.46	-0.0
3,601,868	+	mutL	Sama_3027	0.46	-0.7
3,601,868	+	mutL	Sama_3027	0.46	+1.0
3,601,868	+	mutL	Sama_3027	0.46	-0.7
3,601,869	-	mutL	Sama_3027	0.46	-0.0
3,601,869	-	mutL	Sama_3027	0.46	+1.6
3,601,869	-	mutL	Sama_3027	0.46	+1.1
3,601,944	+	mutL	Sama_3027	0.50	-1.4
3,601,945	-	mutL	Sama_3027	0.50	+0.6
3,601,945	-	mutL	Sama_3027	0.50	+3.9
3,601,945	-	mutL	Sama_3027	0.50	-0.8
3,601,970	+	mutL	Sama_3027	0.51	-1.1
3,601,971	-	mutL	Sama_3027	0.51	-1.2
3,601,984	+	mutL	Sama_3027	0.52	+3.2
3,601,985	-	mutL	Sama_3027	0.52	+7.7
3,601,985	-	mutL	Sama_3027	0.52	+3.2
3,601,985	-	mutL	Sama_3027	0.52	+0.3
3,602,115	+	mutL	Sama_3027	0.59	+1.4
3,602,161	+	mutL	Sama_3027	0.61	+3.2
3,602,161	+	mutL	Sama_3027	0.61	+0.6
3,602,161	+	mutL	Sama_3027	0.61	+2.6
3,602,161	+	mutL	Sama_3027	0.61	+1.8
3,602,162	-	mutL	Sama_3027	0.61	-0.8
3,602,162	-	mutL	Sama_3027	0.61	+0.6
3,602,162	-	mutL	Sama_3027	0.61	+0.7
3,602,162	-	mutL	Sama_3027	0.61	-0.7
3,602,167	+	mutL	Sama_3027	0.61	+6.7
3,602,205	+	mutL	Sama_3027	0.63	+2.2
3,602,205	+	mutL	Sama_3027	0.63	+1.9
3,602,205	+	mutL	Sama_3027	0.63	+0.6
3,602,205	+	mutL	Sama_3027	0.63	+0.7
3,602,206	-	mutL	Sama_3027	0.63	+0.6
3,602,206	-	mutL	Sama_3027	0.63	+1.3
3,602,206	-	mutL	Sama_3027	0.63	+2.6
3,602,206	-	mutL	Sama_3027	0.63	+0.2
3,602,209	+	mutL	Sama_3027	0.63	-0.5
3,602,209	+	mutL	Sama_3027	0.63	-0.0
3,602,209	+	mutL	Sama_3027	0.63	-0.7
3,602,210	-	mutL	Sama_3027	0.63	+0.8
3,602,210	-	mutL	Sama_3027	0.63	+0.2
3,602,302	+	mutL	Sama_3027	0.68	+0.6
3,602,303	-	mutL	Sama_3027	0.68	+3.2
3,602,303	-	mutL	Sama_3027	0.68	+0.3
3,602,309	+	mutL	Sama_3027	0.68	+0.7
3,602,382	+	mutL	Sama_3027	0.72	-0.7
3,602,414	+	mutL	Sama_3027	0.74	+1.5
3,602,414	+	mutL	Sama_3027	0.74	+1.1
3,602,414	+	mutL	Sama_3027	0.74	-0.5
3,602,465	+	mutL	Sama_3027	0.76	+0.2
3,602,468	+	mutL	Sama_3027	0.77	-0.5
3,602,468	+	mutL	Sama_3027	0.77	+0.2
3,602,469	-	mutL	Sama_3027	0.77	+0.6
3,602,469	-	mutL	Sama_3027	0.77	-1.0
3,602,469	-	mutL	Sama_3027	0.77	+8.3
3,602,498	+	mutL	Sama_3027	0.78	-1.1
3,602,499	-	mutL	Sama_3027	0.78	-0.8
3,602,499	-	mutL	Sama_3027	0.78	-0.7
3,602,555	-	mutL	Sama_3027	0.81	-0.0
3,602,621	+	mutL	Sama_3027	0.84	+1.3
3,602,621	+	mutL	Sama_3027	0.84	+1.2
3,602,622	-	mutL	Sama_3027	0.84	+0.5
3,602,622	-	mutL	Sama_3027	0.84	-0.2
3,602,622	-	mutL	Sama_3027	0.84	+3.1
3,602,760	-				+1.9
3,602,766	-				+8.3
3,602,796	-				+0.8
3,602,845	-				+1.4
3,602,865	+				-1.7
3,602,866	-				+0.2
3,602,930	-				+2.0
3,602,930	-				-0.3
3,602,989	+				-1.4
3,602,989	+				-1.2
3,602,989	+				+1.3
3,602,989	+				-0.5
3,602,990	-				+0.3
3,602,990	-				-1.5
3,602,990	-				+1.7
3,603,031	-				+0.1
3,603,031	-				+0.5