Strain Fitness in Shewanella amazonensis SB2B around Sama_2918

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,468,316	+		Sama_2917	0.73	-0.0
3,468,316	+		Sama_2917	0.73	-0.1
3,468,317	-		Sama_2917	0.73	+0.2
3,468,448	+		Sama_2917	0.78	+1.3
3,468,448	+		Sama_2917	0.78	-1.8
3,468,448	+		Sama_2917	0.78	-1.0
3,468,448	+		Sama_2917	0.78	-0.8
3,468,448	+		Sama_2917	0.78	-0.9
3,468,448	+		Sama_2917	0.78	+0.3
3,468,448	+		Sama_2917	0.78	-0.9
3,468,449	-		Sama_2917	0.78	-0.0
3,468,449	-		Sama_2917	0.78	+0.3
3,468,449	-		Sama_2917	0.78	+0.6
3,468,449	-		Sama_2917	0.78	+1.3
3,468,449	-		Sama_2917	0.78	+1.0
3,468,449	-		Sama_2917	0.78	+1.7
3,468,449	-		Sama_2917	0.78	+0.2
3,468,449	-		Sama_2917	0.78	-0.3
3,468,449	-		Sama_2917	0.78	+0.8
3,468,449	-		Sama_2917	0.78	+0.7
3,468,449	-		Sama_2917	0.78	+0.2
3,468,451	-		Sama_2917	0.78	-0.9
3,468,451	-		Sama_2917	0.78	-0.1
3,468,488	+		Sama_2917	0.79	+0.5
3,468,488	+		Sama_2917	0.79	-0.2
3,468,488	+		Sama_2917	0.79	+1.8
3,468,489	-		Sama_2917	0.79	+0.8
3,468,489	-		Sama_2917	0.79	-0.5
3,468,513	+		Sama_2917	0.80	-1.6
3,468,513	+		Sama_2917	0.80	+1.5
3,468,514	-		Sama_2917	0.80	-1.0
3,468,514	-		Sama_2917	0.80	-0.8
3,468,534	-		Sama_2917	0.81	-1.1
3,468,534	-		Sama_2917	0.81	-0.7
3,468,534	-		Sama_2917	0.81	-1.5
3,468,534	-		Sama_2917	0.81	-0.0
3,468,556	-		Sama_2917	0.82	+1.5
3,468,556	-		Sama_2917	0.82	-0.5
3,468,766	+		Sama_2917	0.90	-1.2
3,469,027	+				+3.1
3,469,027	+				-1.3
3,469,027	+				+0.3
3,469,027	+				+0.5
3,469,027	+				-0.3
3,469,043	-				+0.3
3,469,043	-				-0.0
3,469,043	-				-0.7
3,469,055	+				-0.9
3,469,055	+				+0.3
3,469,055	+				-2.2
3,469,055	+				+0.7
3,469,055	+				+1.9
3,469,056	-				+3.1
3,469,056	-				+0.5
3,469,056	-				-0.3
3,469,056	-				+0.1
3,469,056	-				-0.5
3,469,056	-				+0.7
3,469,056	-				+0.6
3,469,056	-				-2.1
3,469,063	+				+0.3
3,469,063	+				-0.0
3,469,201	+				+2.1
3,469,201	+				-0.3
3,469,202	-				+0.4
3,469,215	+				-0.3
3,469,299	-		Sama_2918	0.12	-0.3
3,469,351	+		Sama_2918	0.16	+0.5
3,469,352	-		Sama_2918	0.16	+0.0
3,469,380	+		Sama_2918	0.18	-1.3
3,469,380	+		Sama_2918	0.18	-0.6
3,469,381	-		Sama_2918	0.18	-0.2
3,469,381	-		Sama_2918	0.18	+0.9
3,469,519	-		Sama_2918	0.28	-3.2
3,469,550	-		Sama_2918	0.30	-0.7
3,469,619	+		Sama_2918	0.35	-0.9
3,469,619	+		Sama_2918	0.35	+3.1
3,469,619	+		Sama_2918	0.35	+1.1
3,469,619	+		Sama_2918	0.35	+1.5
3,469,620	-		Sama_2918	0.35	+0.3
3,469,621	-		Sama_2918	0.35	+0.3
3,469,632	-		Sama_2918	0.36	-1.2
3,469,809	+		Sama_2918	0.49	+0.5
3,469,809	+		Sama_2918	0.49	-1.7
3,469,809	+		Sama_2918	0.49	-0.5
3,469,810	-		Sama_2918	0.49	+0.2
3,469,810	-		Sama_2918	0.49	-1.8
3,469,810	-		Sama_2918	0.49	+0.5
3,469,810	-		Sama_2918	0.49	+0.2
3,469,845	+		Sama_2918	0.52	+0.1
3,469,845	+		Sama_2918	0.52	+0.2
3,469,845	+		Sama_2918	0.52	+0.9
3,469,845	+		Sama_2918	0.52	-2.0
3,469,845	+		Sama_2918	0.52	+1.5
3,469,846	-		Sama_2918	0.52	+0.8
3,469,846	-		Sama_2918	0.52	+1.1
3,469,846	-		Sama_2918	0.52	+0.7
3,469,846	-		Sama_2918	0.52	-0.8
3,469,846	-		Sama_2918	0.52	+0.1
3,469,846	-		Sama_2918	0.52	+0.1
3,469,888	-		Sama_2918	0.55	-1.0
3,469,977	+		Sama_2918	0.61	+1.5
3,469,977	+		Sama_2918	0.61	+1.1
3,469,977	+		Sama_2918	0.61	-0.3
3,469,978	-		Sama_2918	0.61	-0.6
3,470,035	-		Sama_2918	0.66	+0.5
3,470,048	+		Sama_2918	0.67	+0.5
3,470,177	+		Sama_2918	0.76	+1.0
3,470,177	+		Sama_2918	0.76	-0.2
3,470,177	+		Sama_2918	0.76	-1.3
3,470,177	+		Sama_2918	0.76	+1.0
3,470,177	+		Sama_2918	0.76	+0.4
3,470,178	-		Sama_2918	0.76	-0.6
3,470,178	-		Sama_2918	0.76	+2.7
3,470,209	+		Sama_2918	0.78	-0.8
3,470,210	-		Sama_2918	0.78	-0.0
3,470,210	-		Sama_2918	0.78	-1.7
3,470,260	+		Sama_2918	0.82	+0.1
3,470,260	+		Sama_2918	0.82	+0.1
3,470,260	+		Sama_2918	0.82	-0.9
3,470,260	+		Sama_2918	0.82	+1.5
3,470,260	+		Sama_2918	0.82	-0.5
3,470,261	-		Sama_2918	0.82	-1.4
3,470,261	-		Sama_2918	0.82	-1.3
3,470,274	+		Sama_2918	0.83	-0.6
3,470,274	+		Sama_2918	0.83	+0.4
3,470,303	+		Sama_2918	0.85	-1.4
3,470,304	-		Sama_2918	0.85	+1.1
3,470,304	-		Sama_2918	0.85	+0.2
3,470,308	+		Sama_2918	0.85	-1.3
3,470,309	-		Sama_2918	0.86	-0.9
3,470,309	-		Sama_2918	0.86	-1.1
3,470,342	+		Sama_2918	0.88	-0.3
3,470,343	-		Sama_2918	0.88	-1.7
3,470,343	-		Sama_2918	0.88	-0.0
3,470,361	+		Sama_2918	0.89	-1.1
3,470,362	-		Sama_2918	0.89	-0.7
3,470,362	-		Sama_2918	0.89	+0.5
3,470,364	+		Sama_2918	0.90	-0.7
3,470,364	+		Sama_2918	0.90	+0.5
3,470,365	-		Sama_2918	0.90	-0.4
3,470,365	-		Sama_2918	0.90	-0.0
3,470,376	-				-3.3
3,470,406	+				+0.5
3,470,406	+				-0.0
3,470,407	-				+0.3
3,470,422	+				+0.1
3,470,422	+				+0.8
3,470,423	-				-0.6
3,470,423	-				+1.1
3,470,423	-				+0.4
3,470,443	+				-0.0
3,470,444	-				-1.7
3,470,446	+				+1.0
3,470,446	+				-1.2
3,470,446	+				-1.3
3,470,446	+				-1.5
3,470,446	+				-0.0
3,470,447	-				-0.6
3,470,452	+				+1.1
3,470,452	+				-1.6
3,470,453	-				+0.1
3,470,453	-				-1.0
3,470,453	-				-0.9
3,470,481	+				+0.1
3,470,481	+				+2.0
3,470,481	+				-0.8
3,470,481	+				+0.3
3,470,481	+				+0.8
3,470,482	-				-2.5
3,470,482	-				+1.1
3,470,482	-				-0.1
3,470,482	-				-0.5
3,470,484	+				+0.3
3,470,485	-				+0.2
3,470,485	-				-1.4
3,470,485	-				-2.4
3,470,505	+				-0.6
3,470,506	-				-1.3
3,470,549	+				+0.5
3,470,549	+				+0.5
3,470,549	+				-1.3
3,470,550	-				+1.1
3,470,550	-				-1.8
3,470,550	-				+1.3
3,470,550	-				+1.1
3,470,570	-				-1.0
3,470,602	-				-1.0
3,470,625	-				+0.1
3,470,625	-				-0.2
3,470,632	+				-0.6
3,470,704	-				-1.2
3,470,704	-				-0.6
3,470,705	+				+0.6
3,470,705	+				+0.3
3,470,705	+				-0.9
3,470,706	-				-1.9
3,470,706	-				-0.7
3,470,706	-				-2.2
3,470,706	-				-0.0
3,470,706	-				-1.7
3,470,727	+				-0.9
3,470,727	+				-1.0
3,470,728	-				+1.0
3,470,728	-				-1.2
3,470,728	-				-0.7
3,470,728	-				-1.0
3,470,728	-				-1.1
3,470,736	+				+1.8
3,470,737	-				-0.0
3,470,737	-				-3.1
3,470,737	-				+3.1
3,470,737	-				-1.4
3,470,743	+				-0.1
3,470,743	+				-1.0
3,470,744	-				-0.8
3,470,744	-				-0.8
3,470,744	-				-0.7
3,470,744	-				+0.1
3,470,756	+				-2.4
3,470,757	-				+0.4
3,470,789	+				-0.7
3,470,790	-				+0.1
3,470,790	-				-0.4
3,470,790	-				+0.1
3,470,790	-				+1.1
3,470,801	-				-1.3
3,470,809	-				-0.7
3,470,824	+				+0.5
3,470,824	+				+0.5
3,470,825	-				-0.3
3,470,962	+		Sama_2919	0.20	-0.2
3,470,962	+		Sama_2919	0.20	+0.7
3,470,963	-		Sama_2919	0.20	+1.5
3,470,963	-		Sama_2919	0.20	-0.6
3,470,963	-		Sama_2919	0.20	-0.2
3,470,963	-		Sama_2919	0.20	-0.2
3,470,987	-		Sama_2919	0.23	+1.1
3,470,987	-		Sama_2919	0.23	-0.2
3,470,995	+		Sama_2919	0.24	+0.2
3,471,021	-		Sama_2919	0.28	-0.2
3,471,078	+		Sama_2919	0.35	+1.1
3,471,079	-		Sama_2919	0.35	-0.3
3,471,079	-		Sama_2919	0.35	-0.7
3,471,239	+		Sama_2919	0.56	-0.9
3,471,409	-		Sama_2919	0.78	+0.7
3,471,461	-		Sama_2919	0.84	-1.1
3,471,473	+		Sama_2919	0.86	-0.8
3,471,473	+		Sama_2919	0.86	+0.5
3,471,473	+		Sama_2919	0.86	-0.3
3,471,473	+		Sama_2919	0.86	-1.1
3,471,474	-		Sama_2919	0.86	-0.8
3,471,474	-		Sama_2919	0.86	-1.0