Strain Fitness in Shewanella amazonensis SB2B around Sama_2917

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,465,419	-				-1.6
3,465,458	+				+0.5
3,465,459	-				+0.8
3,465,513	-				+0.3
3,465,712	+		Sama_2916	0.28	-0.7
3,465,740	+		Sama_2916	0.31	-1.1
3,465,740	+		Sama_2916	0.31	-0.6
3,465,740	+		Sama_2916	0.31	-1.3
3,465,740	+		Sama_2916	0.31	+0.8
3,465,740	+		Sama_2916	0.31	-0.5
3,465,740	+		Sama_2916	0.31	+0.5
3,465,740	+		Sama_2916	0.31	-0.1
3,465,740	+		Sama_2916	0.31	-1.2
3,465,741	-		Sama_2916	0.31	-0.0
3,465,750	+		Sama_2916	0.32	+0.1
3,465,750	+		Sama_2916	0.32	+1.5
3,465,750	+		Sama_2916	0.32	-0.0
3,465,750	+		Sama_2916	0.32	+0.8
3,465,750	+		Sama_2916	0.32	+0.4
3,465,751	-		Sama_2916	0.32	+0.3
3,465,751	-		Sama_2916	0.32	-2.2
3,465,751	-		Sama_2916	0.32	+2.1
3,465,751	-		Sama_2916	0.32	-1.7
3,465,878	+		Sama_2916	0.47	-2.0
3,465,909	+		Sama_2916	0.50	-0.0
3,465,909	+		Sama_2916	0.50	-0.8
3,465,909	+		Sama_2916	0.50	+0.3
3,465,910	-		Sama_2916	0.50	-0.1
3,465,910	-		Sama_2916	0.50	+0.1
3,465,910	-		Sama_2916	0.50	-0.5
3,465,910	-		Sama_2916	0.50	-1.2
3,465,910	-		Sama_2916	0.50	+1.1
3,465,933	+		Sama_2916	0.53	+0.5
3,465,933	+		Sama_2916	0.53	-0.8
3,465,934	-		Sama_2916	0.53	-1.4
3,465,934	-		Sama_2916	0.53	+0.6
3,465,944	+		Sama_2916	0.54	+0.1
3,465,944	+		Sama_2916	0.54	+1.5
3,465,945	-		Sama_2916	0.54	-0.1
3,465,957	-		Sama_2916	0.55	-0.1
3,465,957	-		Sama_2916	0.55	-0.8
3,466,000	+		Sama_2916	0.60	+1.1
3,466,000	+		Sama_2916	0.60	-1.2
3,466,111	+		Sama_2916	0.73	+0.1
3,466,177	-		Sama_2916	0.80	+0.4
3,466,177	-		Sama_2916	0.80	-0.8
3,466,198	+		Sama_2916	0.82	-1.0
3,466,198	+		Sama_2916	0.82	-1.0
3,466,199	-		Sama_2916	0.82	-0.3
3,466,199	-		Sama_2916	0.82	-1.0
3,466,199	-		Sama_2916	0.82	-1.5
3,466,209	+		Sama_2916	0.84	-1.2
3,466,221	-		Sama_2916	0.85	-1.5
3,466,241	+		Sama_2916	0.87	+1.1
3,466,241	+		Sama_2916	0.87	+2.1
3,466,241	+		Sama_2916	0.87	-1.7
3,466,241	+		Sama_2916	0.87	-1.9
3,466,241	+		Sama_2916	0.87	-0.9
3,466,241	+		Sama_2916	0.87	-1.3
3,466,241	+		Sama_2916	0.87	-2.9
3,466,242	-		Sama_2916	0.87	-0.8
3,466,242	-		Sama_2916	0.87	-0.4
3,466,242	-		Sama_2916	0.87	-0.7
3,466,343	+				-0.9
3,466,348	+				+1.7
3,466,348	+				-0.8
3,466,348	+				-1.3
3,466,348	+				-0.7
3,466,349	-				-0.8
3,466,353	+				+0.5
3,466,354	-				+0.2
3,466,354	-				+2.1
3,466,354	-				-2.2
3,466,354	-				-1.1
3,466,413	-				-0.8
3,466,413	-				+1.4
3,466,440	+				+0.8
3,466,441	-				+0.5
3,466,504	+				-0.8
3,466,504	+				+0.4
3,466,504	+				-0.1
3,466,504	+				+1.4
3,466,504	+				+0.7
3,466,505	-				-0.3
3,466,505	-				+0.2
3,466,505	-				-0.7
3,466,505	-				-1.0
3,466,506	+				+1.3
3,466,506	+				+0.0
3,466,506	+				-0.5
3,466,506	+				-0.4
3,466,506	+				-0.6
3,466,507	-				-0.2
3,466,507	-				-1.5
3,466,507	-				+0.1
3,466,549	-				+1.9
3,466,559	-				+0.2
3,466,559	-				+0.8
3,466,559	-				+1.1
3,466,559	-				-1.3
3,466,609	-				+0.3
3,466,609	-				+1.5
3,466,614	-				-0.3
3,466,632	+				+0.5
3,466,633	-				+0.2
3,466,706	-		Sama_2917	0.12	+0.7
3,466,714	+		Sama_2917	0.12	+0.1
3,466,714	+		Sama_2917	0.12	-0.8
3,466,714	+		Sama_2917	0.12	+1.1
3,466,714	+		Sama_2917	0.12	+0.7
3,466,714	+		Sama_2917	0.12	-1.7
3,466,714	+		Sama_2917	0.12	-0.2
3,466,715	-		Sama_2917	0.12	-0.5
3,466,715	-		Sama_2917	0.12	+0.9
3,466,715	-		Sama_2917	0.12	-1.5
3,466,715	-		Sama_2917	0.12	-0.2
3,466,726	+		Sama_2917	0.12	+2.4
3,466,726	+		Sama_2917	0.12	+1.5
3,466,727	-		Sama_2917	0.12	-0.2
3,466,727	-		Sama_2917	0.12	+1.1
3,466,727	-		Sama_2917	0.12	-0.4
3,466,727	-		Sama_2917	0.12	+1.8
3,466,736	+		Sama_2917	0.13	+1.9
3,466,736	+		Sama_2917	0.13	-1.3
3,466,736	+		Sama_2917	0.13	+2.1
3,466,736	+		Sama_2917	0.13	-0.2
3,466,853	-		Sama_2917	0.17	-1.5
3,466,853	-		Sama_2917	0.17	+0.3
3,466,853	-		Sama_2917	0.17	-0.3
3,466,858	+		Sama_2917	0.17	+0.7
3,466,859	-		Sama_2917	0.17	+0.5
3,466,859	-		Sama_2917	0.17	-1.9
3,466,859	-		Sama_2917	0.17	+0.2
3,466,859	-		Sama_2917	0.17	-0.5
3,466,930	+		Sama_2917	0.20	+0.3
3,466,972	-		Sama_2917	0.22	+1.7
3,466,995	+		Sama_2917	0.23	+0.5
3,466,995	+		Sama_2917	0.23	+0.1
3,466,995	+		Sama_2917	0.23	-2.3
3,466,995	+		Sama_2917	0.23	-1.2
3,466,996	-		Sama_2917	0.23	+3.1
3,466,996	-		Sama_2917	0.23	-1.4
3,466,996	-		Sama_2917	0.23	+0.0
3,467,011	-		Sama_2917	0.23	-0.0
3,467,054	-		Sama_2917	0.25	+1.1
3,467,054	-		Sama_2917	0.25	-0.1
3,467,054	-		Sama_2917	0.25	-0.0
3,467,055	+		Sama_2917	0.25	+0.3
3,467,080	+		Sama_2917	0.26	+1.7
3,467,087	+		Sama_2917	0.26	-0.7
3,467,197	+		Sama_2917	0.30	-2.1
3,467,197	+		Sama_2917	0.30	+0.4
3,467,197	+		Sama_2917	0.30	+0.8
3,467,198	-		Sama_2917	0.30	-0.2
3,467,209	+		Sama_2917	0.31	+1.1
3,467,232	+		Sama_2917	0.32	-1.6
3,467,232	+		Sama_2917	0.32	+0.8
3,467,299	-		Sama_2917	0.34	+0.9
3,467,299	-		Sama_2917	0.34	+0.5
3,467,370	+		Sama_2917	0.37	-0.9
3,467,371	-		Sama_2917	0.37	+0.5
3,467,371	-		Sama_2917	0.37	+0.1
3,467,371	-		Sama_2917	0.37	+0.8
3,467,371	-		Sama_2917	0.37	-0.3
3,467,371	-		Sama_2917	0.37	-1.6
3,467,472	+		Sama_2917	0.41	+2.3
3,467,545	+		Sama_2917	0.43	-1.3
3,467,546	-		Sama_2917	0.44	+0.5
3,467,675	+		Sama_2917	0.48	+0.5
3,467,675	+		Sama_2917	0.48	-1.5
3,467,675	+		Sama_2917	0.48	-0.6
3,467,676	-		Sama_2917	0.48	+1.3
3,467,676	-		Sama_2917	0.48	-0.5
3,467,725	+		Sama_2917	0.50	-1.7
3,467,725	+		Sama_2917	0.50	+1.0
3,467,726	-		Sama_2917	0.50	-0.4
3,467,757	+		Sama_2917	0.52	-0.7
3,467,757	+		Sama_2917	0.52	-0.9
3,467,758	-		Sama_2917	0.52	-0.0
3,467,758	-		Sama_2917	0.52	-0.8
3,467,792	+		Sama_2917	0.53	-0.3
3,467,792	+		Sama_2917	0.53	-1.0
3,467,792	+		Sama_2917	0.53	+1.1
3,467,792	+		Sama_2917	0.53	-0.5
3,467,793	-		Sama_2917	0.53	+3.3
3,467,793	-		Sama_2917	0.53	+0.3
3,467,793	-		Sama_2917	0.53	-0.3
3,467,818	+		Sama_2917	0.54	+0.4
3,467,819	-		Sama_2917	0.54	+0.5
3,467,819	-		Sama_2917	0.54	+0.0
3,467,819	-		Sama_2917	0.54	+0.1
3,467,819	-		Sama_2917	0.54	+1.1
3,467,839	-		Sama_2917	0.55	-1.5
3,468,070	+		Sama_2917	0.63	+0.3
3,468,070	+		Sama_2917	0.63	+0.1
3,468,070	+		Sama_2917	0.63	-0.1
3,468,071	-		Sama_2917	0.64	+0.6
3,468,071	-		Sama_2917	0.64	+2.1
3,468,085	+		Sama_2917	0.64	+2.1
3,468,085	+		Sama_2917	0.64	-0.0
3,468,086	-		Sama_2917	0.64	+1.0
3,468,316	+		Sama_2917	0.73	-0.0
3,468,316	+		Sama_2917	0.73	-0.1
3,468,317	-		Sama_2917	0.73	+0.2
3,468,448	+		Sama_2917	0.78	+1.3
3,468,448	+		Sama_2917	0.78	-1.8
3,468,448	+		Sama_2917	0.78	-1.0
3,468,448	+		Sama_2917	0.78	-0.8
3,468,448	+		Sama_2917	0.78	-0.9
3,468,448	+		Sama_2917	0.78	+0.3
3,468,448	+		Sama_2917	0.78	-0.9
3,468,449	-		Sama_2917	0.78	-0.0
3,468,449	-		Sama_2917	0.78	+0.3
3,468,449	-		Sama_2917	0.78	+0.6
3,468,449	-		Sama_2917	0.78	+1.3
3,468,449	-		Sama_2917	0.78	+1.0
3,468,449	-		Sama_2917	0.78	+1.7
3,468,449	-		Sama_2917	0.78	+0.2
3,468,449	-		Sama_2917	0.78	-0.3
3,468,449	-		Sama_2917	0.78	+0.8
3,468,449	-		Sama_2917	0.78	+0.7
3,468,449	-		Sama_2917	0.78	+0.2
3,468,451	-		Sama_2917	0.78	-0.9
3,468,451	-		Sama_2917	0.78	-0.1
3,468,488	+		Sama_2917	0.79	+0.5
3,468,488	+		Sama_2917	0.79	-0.2
3,468,488	+		Sama_2917	0.79	+1.8
3,468,489	-		Sama_2917	0.79	+0.8
3,468,489	-		Sama_2917	0.79	-0.5
3,468,513	+		Sama_2917	0.80	-1.6
3,468,513	+		Sama_2917	0.80	+1.5
3,468,514	-		Sama_2917	0.80	-1.0
3,468,514	-		Sama_2917	0.80	-0.8
3,468,534	-		Sama_2917	0.81	-1.1
3,468,534	-		Sama_2917	0.81	-0.7
3,468,534	-		Sama_2917	0.81	-1.5
3,468,534	-		Sama_2917	0.81	-0.0
3,468,556	-		Sama_2917	0.82	+1.5
3,468,556	-		Sama_2917	0.82	-0.5
3,468,766	+		Sama_2917	0.90	-1.2
3,469,027	+				+3.1
3,469,027	+				-1.3
3,469,027	+				+0.3
3,469,027	+				+0.5
3,469,027	+				-0.3
3,469,043	-				+0.3
3,469,043	-				-0.0
3,469,043	-				-0.7
3,469,055	+				-0.9
3,469,055	+				+0.3
3,469,055	+				-2.2
3,469,055	+				+0.7
3,469,055	+				+1.9
3,469,056	-				+3.1
3,469,056	-				+0.5
3,469,056	-				-0.3
3,469,056	-				+0.1
3,469,056	-				-0.5
3,469,056	-				+0.7
3,469,056	-				+0.6
3,469,056	-				-2.1
3,469,063	+				+0.3
3,469,063	+				-0.0
3,469,201	+				+2.1
3,469,201	+				-0.3
3,469,202	-				+0.4
3,469,215	+				-0.3
3,469,299	-		Sama_2918	0.12	-0.3
3,469,351	+		Sama_2918	0.16	+0.5
3,469,352	-		Sama_2918	0.16	+0.0
3,469,380	+		Sama_2918	0.18	-1.3
3,469,380	+		Sama_2918	0.18	-0.6
3,469,381	-		Sama_2918	0.18	-0.2
3,469,381	-		Sama_2918	0.18	+0.9
3,469,519	-		Sama_2918	0.28	-3.2
3,469,550	-		Sama_2918	0.30	-0.7
3,469,619	+		Sama_2918	0.35	-0.9
3,469,619	+		Sama_2918	0.35	+3.1
3,469,619	+		Sama_2918	0.35	+1.1
3,469,619	+		Sama_2918	0.35	+1.5
3,469,620	-		Sama_2918	0.35	+0.3
3,469,621	-		Sama_2918	0.35	+0.3
3,469,632	-		Sama_2918	0.36	-1.2
3,469,809	+		Sama_2918	0.49	+0.5
3,469,809	+		Sama_2918	0.49	-1.7
3,469,809	+		Sama_2918	0.49	-0.5
3,469,810	-		Sama_2918	0.49	+0.2
3,469,810	-		Sama_2918	0.49	-1.8
3,469,810	-		Sama_2918	0.49	+0.5
3,469,810	-		Sama_2918	0.49	+0.2
3,469,845	+		Sama_2918	0.52	+0.1
3,469,845	+		Sama_2918	0.52	+0.2
3,469,845	+		Sama_2918	0.52	+0.9
3,469,845	+		Sama_2918	0.52	-2.0
3,469,845	+		Sama_2918	0.52	+1.5
3,469,846	-		Sama_2918	0.52	+0.8
3,469,846	-		Sama_2918	0.52	+1.1
3,469,846	-		Sama_2918	0.52	+0.7
3,469,846	-		Sama_2918	0.52	-0.8
3,469,846	-		Sama_2918	0.52	+0.1
3,469,846	-		Sama_2918	0.52	+0.1
3,469,888	-		Sama_2918	0.55	-1.0
3,469,977	+		Sama_2918	0.61	+1.5
3,469,977	+		Sama_2918	0.61	+1.1
3,469,977	+		Sama_2918	0.61	-0.3
3,469,978	-		Sama_2918	0.61	-0.6