Strain Fitness in Shewanella amazonensis SB2B around Sama_2893

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,434,753	+		Sama_2892	0.34	-0.2
3,434,753	+		Sama_2892	0.34	+0.1
3,434,753	+		Sama_2892	0.34	+1.0
3,434,754	-		Sama_2892	0.34	+1.1
3,434,754	-		Sama_2892	0.34	-0.8
3,434,754	-		Sama_2892	0.34	-0.1
3,434,754	-		Sama_2892	0.34	+0.2
3,434,754	-		Sama_2892	0.34	-0.0
3,434,754	-		Sama_2892	0.34	+1.0
3,434,754	-		Sama_2892	0.34	+1.8
3,434,754	-		Sama_2892	0.34	-0.5
3,434,754	-		Sama_2892	0.34	-0.0
3,434,754	-		Sama_2892	0.34	-0.0
3,434,783	+		Sama_2892	0.38	-0.6
3,434,784	-		Sama_2892	0.38	+0.3
3,434,833	-		Sama_2892	0.44	+0.1
3,434,833	-		Sama_2892	0.44	+2.1
3,434,866	-		Sama_2892	0.48	-0.6
3,434,883	-		Sama_2892	0.50	+0.3
3,434,883	-		Sama_2892	0.50	-0.6
3,434,983	-		Sama_2892	0.62	-0.2
3,435,025	-		Sama_2892	0.67	+0.0
3,435,025	-		Sama_2892	0.67	+0.1
3,435,051	+		Sama_2892	0.71	+1.1
3,435,052	-		Sama_2892	0.71	+0.8
3,435,158	+		Sama_2892	0.84	-0.2
3,435,159	-		Sama_2892	0.84	-0.9
3,435,277	+				+0.5
3,435,277	+				+0.3
3,435,278	-				+1.5
3,435,278	-				-0.6
3,435,278	-				-0.6
3,435,278	-				-1.1
3,435,278	-				+0.1
3,435,278	-				-0.3
3,435,278	-				-0.4
3,435,288	+				-0.8
3,435,288	+				+1.0
3,435,289	-				-1.1
3,435,289	-				-0.3
3,435,289	-				-1.7
3,435,303	-				-1.5
3,435,320	+				+0.3
3,435,320	+				+0.5
3,435,320	+				+0.6
3,435,321	-				+0.6
3,435,321	-				-1.2
3,435,321	-				+1.0
3,435,323	-				-1.6
3,435,333	-				+1.1
3,435,335	-				-0.2
3,435,448	-				+0.8
3,435,472	-				-0.5
3,435,487	+				-0.8
3,435,497	+				+1.9
3,435,508	+				-1.5
3,435,508	+				+0.4
3,435,508	+				+0.1
3,435,509	-				-1.1
3,435,509	-				+0.1
3,435,509	-				-3.1
3,435,509	-				-1.0
3,435,528	+				-0.4
3,435,529	-				-1.3
3,435,545	+				+0.9
3,435,582	+				-0.2
3,435,603	-				+0.8
3,435,612	+				+1.1
3,435,613	-				+0.1
3,435,623	-				+1.5
3,435,623	-				-0.5
3,435,629	+				+2.3
3,435,629	+				+0.4
3,435,629	+				+2.2
3,435,629	+				+2.7
3,435,629	+				+2.0
3,435,630	-				+0.6
3,435,630	-				-1.2
3,435,631	+				+1.1
3,435,631	+				+0.6
3,435,631	+				+0.1
3,435,632	-				-1.5
3,435,632	-				-1.9
3,435,632	-				-1.1
3,435,632	-				-0.9
3,435,632	-				-0.8
3,435,632	-				+0.3
3,435,632	-				+0.3
3,435,632	-				+0.3
3,435,667	+				-1.0
3,435,667	+				-1.4
3,435,667	+				-1.6
3,435,671	+				-0.1
3,435,671	+				+0.1
3,435,671	+				+0.2
3,435,672	-				+0.8
3,435,675	-				-0.3
3,435,687	+				-0.5
3,435,687	+				+1.3
3,435,688	-				-0.0
3,435,688	-				+1.3
3,435,688	-				+0.8
3,435,753	+		Sama_2893	0.12	+3.1
3,435,753	+		Sama_2893	0.12	-1.6
3,435,753	+		Sama_2893	0.12	-0.2
3,435,754	-		Sama_2893	0.12	-1.0
3,435,796	+		Sama_2893	0.17	-1.5
3,435,796	+		Sama_2893	0.17	+0.1
3,435,796	+		Sama_2893	0.17	-1.3
3,435,796	+		Sama_2893	0.17	+0.0
3,435,796	+		Sama_2893	0.17	+0.5
3,435,796	+		Sama_2893	0.17	+0.8
3,435,796	+		Sama_2893	0.17	-2.3
3,435,796	+		Sama_2893	0.17	-1.4
3,435,797	-		Sama_2893	0.17	-0.8
3,435,797	-		Sama_2893	0.17	-2.2
3,435,797	-		Sama_2893	0.17	-0.0
3,435,797	-		Sama_2893	0.17	+0.4
3,435,797	-		Sama_2893	0.17	-1.2
3,435,797	-		Sama_2893	0.17	+0.7
3,435,797	-		Sama_2893	0.17	-0.0
3,435,797	-		Sama_2893	0.17	-0.7
3,435,797	-		Sama_2893	0.17	-0.8
3,435,797	-		Sama_2893	0.17	-2.2
3,435,797	-		Sama_2893	0.17	+0.3
3,435,800	+		Sama_2893	0.17	-0.0
3,435,801	-		Sama_2893	0.17	-0.9
3,435,801	-		Sama_2893	0.17	-1.3
3,435,801	-		Sama_2893	0.17	-2.2
3,435,801	-		Sama_2893	0.17	-0.2
3,435,801	-		Sama_2893	0.17	-1.7
3,435,801	-		Sama_2893	0.17	-0.9
3,435,814	+		Sama_2893	0.19	-1.7
3,435,815	-		Sama_2893	0.19	-1.3
3,435,831	+		Sama_2893	0.21	-1.2
3,435,831	+		Sama_2893	0.21	+0.1
3,435,832	-		Sama_2893	0.21	-0.9
3,435,832	-		Sama_2893	0.21	-0.1
3,435,832	-		Sama_2893	0.21	-0.3
3,435,902	+		Sama_2893	0.29	-1.5
3,435,902	+		Sama_2893	0.29	-1.3
3,435,902	+		Sama_2893	0.29	+0.4
3,435,903	-		Sama_2893	0.29	-1.3
3,435,903	-		Sama_2893	0.29	-1.9
3,435,909	+		Sama_2893	0.29	-0.5
3,435,910	-		Sama_2893	0.29	-1.8
3,435,925	+		Sama_2893	0.31	+0.3
3,435,925	+		Sama_2893	0.31	-1.8
3,435,925	+		Sama_2893	0.31	+0.9
3,435,925	+		Sama_2893	0.31	-1.0
3,435,925	+		Sama_2893	0.31	+0.4
3,435,926	-		Sama_2893	0.31	+0.1
3,435,926	-		Sama_2893	0.31	+0.1
3,435,926	-		Sama_2893	0.31	-0.3
3,435,926	-		Sama_2893	0.31	-1.0
3,435,926	-		Sama_2893	0.31	-3.1
3,435,926	-		Sama_2893	0.31	+0.5
3,435,927	+		Sama_2893	0.31	+0.4
3,435,928	-		Sama_2893	0.32	+0.7
3,435,964	+		Sama_2893	0.36	-2.0
3,435,965	-		Sama_2893	0.36	-1.0
3,435,966	+		Sama_2893	0.36	-0.0
3,435,966	+		Sama_2893	0.36	-2.8
3,435,966	+		Sama_2893	0.36	+1.3
3,435,966	+		Sama_2893	0.36	+0.1
3,435,966	+		Sama_2893	0.36	-0.8
3,435,966	+		Sama_2893	0.36	-1.9
3,435,967	-		Sama_2893	0.36	+0.1
3,435,967	-		Sama_2893	0.36	-0.2
3,435,979	+		Sama_2893	0.37	-1.6
3,435,980	-		Sama_2893	0.37	-0.5
3,435,980	-		Sama_2893	0.37	+0.8
3,435,989	+		Sama_2893	0.38	-2.2
3,435,989	+		Sama_2893	0.38	-0.9
3,435,989	+		Sama_2893	0.38	-2.8
3,435,989	+		Sama_2893	0.38	-0.3
3,435,990	-		Sama_2893	0.39	-1.3
3,435,990	-		Sama_2893	0.39	+0.1
3,435,990	-		Sama_2893	0.39	-1.6
3,435,990	-		Sama_2893	0.39	+0.3
3,435,991	+		Sama_2893	0.39	-2.9
3,435,991	+		Sama_2893	0.39	-1.3
3,435,991	+		Sama_2893	0.39	-1.0
3,435,991	+		Sama_2893	0.39	+0.5
3,435,991	+		Sama_2893	0.39	-0.9
3,435,991	+		Sama_2893	0.39	+1.5
3,435,991	+		Sama_2893	0.39	-0.6
3,435,991	+		Sama_2893	0.39	-2.1
3,435,991	+		Sama_2893	0.39	-0.0
3,435,991	+		Sama_2893	0.39	-0.4
3,435,991	+		Sama_2893	0.39	-2.3
3,435,991	+		Sama_2893	0.39	-1.0
3,435,991	+		Sama_2893	0.39	-0.6
3,435,992	-		Sama_2893	0.39	+3.1
3,435,992	-		Sama_2893	0.39	-0.2
3,435,992	-		Sama_2893	0.39	-1.6
3,435,992	-		Sama_2893	0.39	-1.6
3,435,992	-		Sama_2893	0.39	+0.3
3,435,992	-		Sama_2893	0.39	-0.8
3,435,992	-		Sama_2893	0.39	-0.6
3,435,992	-		Sama_2893	0.39	+1.5
3,435,992	-		Sama_2893	0.39	-0.8
3,435,992	-		Sama_2893	0.39	+1.1
3,435,992	-		Sama_2893	0.39	+0.3
3,435,992	-		Sama_2893	0.39	-0.5
3,435,992	-		Sama_2893	0.39	-0.2
3,436,047	+		Sama_2893	0.45	-1.1
3,436,047	+		Sama_2893	0.45	+1.8
3,436,047	+		Sama_2893	0.45	-1.7
3,436,047	+		Sama_2893	0.45	+0.9
3,436,048	-		Sama_2893	0.45	-2.0
3,436,048	-		Sama_2893	0.45	-1.4
3,436,048	-		Sama_2893	0.45	-1.9
3,436,048	-		Sama_2893	0.45	+0.5
3,436,048	-		Sama_2893	0.45	-1.1
3,436,048	-		Sama_2893	0.45	-1.7
3,436,112	+		Sama_2893	0.52	-1.3
3,436,112	+		Sama_2893	0.52	+0.7
3,436,113	-		Sama_2893	0.52	-0.9
3,436,113	-		Sama_2893	0.52	-0.8
3,436,113	-		Sama_2893	0.52	+0.1
3,436,214	+		Sama_2893	0.64	-2.9
3,436,214	+		Sama_2893	0.64	+0.5
3,436,214	+		Sama_2893	0.64	+0.2
3,436,214	+		Sama_2893	0.64	-1.5
3,436,215	-		Sama_2893	0.64	+2.1
3,436,246	+		Sama_2893	0.67	-0.0
3,436,246	+		Sama_2893	0.67	-1.3
3,436,247	-		Sama_2893	0.68	-0.3
3,436,291	+		Sama_2893	0.73	-2.0
3,436,291	+		Sama_2893	0.73	-1.9
3,436,292	-		Sama_2893	0.73	-1.1
3,436,292	-		Sama_2893	0.73	-1.2
3,436,292	-		Sama_2893	0.73	-0.3
3,436,292	-		Sama_2893	0.73	-0.8
3,436,292	-		Sama_2893	0.73	-1.0
3,436,321	+		Sama_2893	0.76	+0.5
3,436,321	+		Sama_2893	0.76	-0.6
3,436,321	+		Sama_2893	0.76	-0.7
3,436,321	+		Sama_2893	0.76	+0.9
3,436,321	+		Sama_2893	0.76	+0.1
3,436,321	+		Sama_2893	0.76	-0.5
3,436,322	-		Sama_2893	0.76	+0.1
3,436,322	-		Sama_2893	0.76	-1.6
3,436,322	-		Sama_2893	0.76	+2.1
3,436,322	-		Sama_2893	0.76	-0.3
3,436,322	-		Sama_2893	0.76	-1.0
3,436,322	-		Sama_2893	0.76	+0.1
3,436,322	-		Sama_2893	0.76	+2.5
3,436,344	+		Sama_2893	0.79	+0.5
3,436,344	+		Sama_2893	0.79	+1.7
3,436,344	+		Sama_2893	0.79	+0.1
3,436,344	+		Sama_2893	0.79	-1.1
3,436,435	+		Sama_2893	0.89	-2.5
3,436,435	+		Sama_2893	0.89	+0.8
3,436,435	+		Sama_2893	0.89	-1.7
3,436,436	-		Sama_2893	0.89	+0.1
3,436,436	-		Sama_2893	0.89	+0.2
3,436,436	-		Sama_2893	0.89	-0.0
3,436,436	-		Sama_2893	0.89	-2.2
3,436,436	-		Sama_2893	0.89	-2.3
3,436,438	-		Sama_2893	0.89	-0.0
3,436,445	-				-1.7
3,436,473	-				-1.5
3,436,477	+				-0.1
3,436,477	+				-1.0
3,436,478	-				-1.1
3,436,478	-				+0.8
3,436,478	-				-1.7
3,436,478	-				-0.8
3,436,622	+				-1.1
3,436,623	-				-0.8
3,436,628	+				+0.5
3,436,629	-				+1.0
3,436,719	+		Sama_2894	0.10	-0.0
3,436,720	-		Sama_2894	0.10	+0.8
3,436,720	-		Sama_2894	0.10	-2.0
3,436,720	-		Sama_2894	0.10	-0.0
3,436,720	-		Sama_2894	0.10	-0.7
3,436,722	-		Sama_2894	0.11	-1.6
3,436,778	+		Sama_2894	0.14	-2.8
3,436,778	+		Sama_2894	0.14	+1.5
3,436,779	-		Sama_2894	0.14	-0.0
3,436,779	-		Sama_2894	0.14	-0.5
3,436,779	-		Sama_2894	0.14	-0.2
3,436,779	-		Sama_2894	0.14	-0.3
3,436,800	+		Sama_2894	0.15	-0.2
3,436,800	+		Sama_2894	0.15	-0.0
3,436,800	+		Sama_2894	0.15	-1.7
3,436,800	+		Sama_2894	0.15	-0.0
3,436,800	+		Sama_2894	0.15	+1.3
3,436,800	+		Sama_2894	0.15	-0.6
3,436,800	+		Sama_2894	0.15	+0.1
3,436,800	+		Sama_2894	0.15	-0.9
3,436,800	+		Sama_2894	0.15	+0.1
3,436,800	+		Sama_2894	0.15	-0.7
3,436,800	+		Sama_2894	0.15	-1.5
3,436,800	+		Sama_2894	0.15	+0.6
3,436,800	+		Sama_2894	0.15	-2.0
3,436,800	+		Sama_2894	0.15	-0.3
3,436,801	-		Sama_2894	0.15	-0.8
3,436,801	-		Sama_2894	0.15	-0.8
3,436,801	-		Sama_2894	0.15	-0.2
3,436,801	-		Sama_2894	0.15	-1.0
3,436,801	-		Sama_2894	0.15	-1.2
3,436,801	-		Sama_2894	0.15	+1.5
3,436,801	-		Sama_2894	0.15	+1.3
3,436,801	-		Sama_2894	0.15	+0.5
3,436,801	-		Sama_2894	0.15	+1.1
3,436,801	-		Sama_2894	0.15	-1.1
3,436,801	-		Sama_2894	0.15	-0.4
3,436,801	-		Sama_2894	0.15	-0.3
3,436,801	-		Sama_2894	0.15	+0.1
3,436,801	-		Sama_2894	0.15	+0.9
3,436,801	-		Sama_2894	0.15	-1.7
3,436,803	-		Sama_2894	0.16	+0.7
3,437,094	+		Sama_2894	0.33	+0.8
3,437,094	+		Sama_2894	0.33	+0.5
3,437,094	+		Sama_2894	0.33	-0.2
3,437,095	-		Sama_2894	0.33	-1.6
3,437,095	-		Sama_2894	0.33	-0.8
3,437,095	-		Sama_2894	0.33	-0.2
3,437,095	-		Sama_2894	0.33	-0.6
3,437,130	-		Sama_2894	0.35	-0.3
3,437,177	-		Sama_2894	0.38	-0.4
3,437,392	+		Sama_2894	0.51	+1.6
3,437,452	-		Sama_2894	0.55	-0.2
3,437,452	-		Sama_2894	0.55	-0.7
3,437,468	+		Sama_2894	0.56	-1.3
3,437,469	-		Sama_2894	0.56	+0.6
3,437,469	-		Sama_2894	0.56	+3.1
3,437,469	-		Sama_2894	0.56	-0.7
3,437,481	+		Sama_2894	0.57	-2.9
3,437,520	+		Sama_2894	0.59	+0.8
3,437,520	+		Sama_2894	0.59	-0.1
3,437,520	+		Sama_2894	0.59	-1.1
3,437,520	+		Sama_2894	0.59	+0.5
3,437,521	-		Sama_2894	0.59	-0.3
3,437,521	-		Sama_2894	0.59	-2.3
3,437,521	-		Sama_2894	0.59	+1.1
3,437,521	-		Sama_2894	0.59	-1.1