Strain Fitness in Shewanella amazonensis SB2B around Sama_2777

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,318,756	+		Sama_2776	0.21	-0.3
3,318,756	+		Sama_2776	0.21	-1.1
3,318,756	+		Sama_2776	0.21	+1.4
3,318,756	+		Sama_2776	0.21	-0.5
3,318,757	-		Sama_2776	0.21	-0.1
3,318,757	-		Sama_2776	0.21	+1.0
3,318,762	-		Sama_2776	0.21	-1.2
3,318,762	-		Sama_2776	0.21	-1.6
3,318,831	+		Sama_2776	0.28	+0.5
3,318,831	+		Sama_2776	0.28	-0.5
3,318,831	+		Sama_2776	0.28	-1.1
3,318,831	+		Sama_2776	0.28	-0.3
3,318,831	+		Sama_2776	0.28	-0.6
3,318,832	-		Sama_2776	0.28	+0.6
3,318,832	-		Sama_2776	0.28	+0.5
3,318,833	+		Sama_2776	0.28	+0.3
3,318,834	-		Sama_2776	0.28	-1.4
3,318,893	-		Sama_2776	0.34	+0.3
3,318,908	-		Sama_2776	0.35	-0.3
3,318,908	-		Sama_2776	0.35	+0.9
3,318,908	-		Sama_2776	0.35	-0.2
3,318,908	-		Sama_2776	0.35	+0.7
3,318,908	-		Sama_2776	0.35	-0.8
3,318,908	-		Sama_2776	0.35	-0.8
3,318,908	-		Sama_2776	0.35	+0.3
3,318,924	+		Sama_2776	0.37	+0.5
3,318,925	-		Sama_2776	0.37	-0.1
3,318,925	-		Sama_2776	0.37	+0.1
3,318,925	-		Sama_2776	0.37	-1.6
3,318,925	-		Sama_2776	0.37	-0.6
3,318,947	-		Sama_2776	0.39	+0.3
3,318,975	+		Sama_2776	0.42	+0.6
3,318,975	+		Sama_2776	0.42	-1.4
3,318,975	+		Sama_2776	0.42	+0.1
3,318,975	+		Sama_2776	0.42	-0.1
3,318,975	+		Sama_2776	0.42	-0.5
3,318,975	+		Sama_2776	0.42	-1.2
3,318,975	+		Sama_2776	0.42	-0.7
3,318,976	-		Sama_2776	0.42	-0.9
3,318,976	-		Sama_2776	0.42	-1.0
3,319,063	-		Sama_2776	0.50	+0.4
3,319,063	-		Sama_2776	0.50	+0.2
3,319,063	-		Sama_2776	0.50	-0.9
3,319,064	+		Sama_2776	0.50	+0.1
3,319,064	+		Sama_2776	0.50	-1.5
3,319,064	+		Sama_2776	0.50	+0.4
3,319,064	+		Sama_2776	0.50	-0.9
3,319,064	+		Sama_2776	0.50	-1.3
3,319,064	+		Sama_2776	0.50	+0.7
3,319,065	-		Sama_2776	0.50	+2.2
3,319,065	-		Sama_2776	0.50	-1.3
3,319,065	-		Sama_2776	0.50	-0.3
3,319,065	-		Sama_2776	0.50	-0.7
3,319,067	-		Sama_2776	0.50	-0.1
3,319,104	+		Sama_2776	0.54	-1.3
3,319,104	+		Sama_2776	0.54	+0.2
3,319,104	+		Sama_2776	0.54	-0.1
3,319,104	+		Sama_2776	0.54	+0.1
3,319,104	+		Sama_2776	0.54	+0.2
3,319,104	+		Sama_2776	0.54	-1.1
3,319,105	-		Sama_2776	0.54	+0.4
3,319,105	-		Sama_2776	0.54	+0.3
3,319,161	+		Sama_2776	0.60	-0.1
3,319,161	+		Sama_2776	0.60	+1.1
3,319,162	-		Sama_2776	0.60	+0.3
3,319,237	-		Sama_2776	0.67	+0.6
3,319,261	+		Sama_2776	0.69	-0.3
3,319,262	-		Sama_2776	0.69	-1.0
3,319,262	-		Sama_2776	0.69	+0.9
3,319,262	-		Sama_2776	0.69	-1.3
3,319,262	-		Sama_2776	0.69	-0.5
3,319,272	+		Sama_2776	0.70	-1.3
3,319,273	-		Sama_2776	0.70	-0.7
3,319,333	-		Sama_2776	0.76	-1.7
3,319,368	+		Sama_2776	0.79	-1.0
3,319,369	-		Sama_2776	0.80	+1.0
3,319,369	-		Sama_2776	0.80	-0.3
3,319,369	-		Sama_2776	0.80	+0.4
3,319,369	-		Sama_2776	0.80	-0.7
3,319,397	-		Sama_2776	0.82	-0.9
3,319,397	-		Sama_2776	0.82	+0.1
3,319,426	+		Sama_2776	0.85	+0.6
3,319,427	-		Sama_2776	0.85	-1.1
3,319,427	-		Sama_2776	0.85	-0.3
3,319,427	-		Sama_2776	0.85	-1.1
3,319,454	+		Sama_2776	0.88	+0.1
3,319,455	-		Sama_2776	0.88	+0.6
3,319,455	-		Sama_2776	0.88	+1.5
3,319,455	-		Sama_2776	0.88	+0.1
3,319,460	-		Sama_2776	0.88	+0.0
3,319,460	-		Sama_2776	0.88	-1.1
3,319,460	-		Sama_2776	0.88	+0.1
3,319,561	-				+0.7
3,319,579	-				-0.8
3,319,583	+				+1.5
3,319,607	+				-0.5
3,319,608	-				-0.6
3,319,608	-				+1.4
3,319,608	-				-0.8
3,319,711	+				+4.3
3,319,711	+				+1.5
3,319,734	-				+1.5
3,319,782	+				+2.0
3,319,911	+		Sama_2777	0.16	+1.8
3,319,911	+		Sama_2777	0.16	+2.7
3,319,912	-		Sama_2777	0.16	+1.9
3,319,912	-		Sama_2777	0.16	+1.6
3,319,970	+		Sama_2777	0.21	+1.1
3,320,033	+		Sama_2777	0.26	+1.1
3,320,033	+		Sama_2777	0.26	+2.0
3,320,056	+		Sama_2777	0.28	-0.7
3,320,057	-		Sama_2777	0.28	+0.9
3,320,057	-		Sama_2777	0.28	+0.2
3,320,221	+		Sama_2777	0.41	+1.4
3,320,221	+		Sama_2777	0.41	+1.5
3,320,221	+		Sama_2777	0.41	+0.5
3,320,222	-		Sama_2777	0.41	-0.5
3,320,222	-		Sama_2777	0.41	+1.9
3,320,222	-		Sama_2777	0.41	-0.5
3,320,222	-		Sama_2777	0.41	+0.1
3,320,361	+		Sama_2777	0.53	+0.3
3,320,362	-		Sama_2777	0.53	+0.4
3,320,362	-		Sama_2777	0.53	+2.0
3,320,362	-		Sama_2777	0.53	+2.3
3,320,385	+		Sama_2777	0.55	+0.7
3,320,385	+		Sama_2777	0.55	-0.3
3,320,385	+		Sama_2777	0.55	-1.0
3,320,386	-		Sama_2777	0.55	+2.2
3,320,386	-		Sama_2777	0.55	+2.3
3,320,386	-		Sama_2777	0.55	+1.4
3,320,386	-		Sama_2777	0.55	+2.1
3,320,386	-		Sama_2777	0.55	+2.3
3,320,386	-		Sama_2777	0.55	-0.3
3,320,412	+		Sama_2777	0.57	-1.5
3,320,413	-		Sama_2777	0.57	+0.7
3,320,421	+		Sama_2777	0.58	+1.8
3,320,422	-		Sama_2777	0.58	+2.0
3,320,442	-		Sama_2777	0.59	+0.5
3,320,471	-		Sama_2777	0.62	+1.8
3,320,486	+		Sama_2777	0.63	+1.7
3,320,540	+		Sama_2777	0.67	-0.1
3,320,580	-		Sama_2777	0.70	+0.1
3,320,580	-		Sama_2777	0.70	+0.3
3,320,586	-		Sama_2777	0.71	+1.6
3,320,605	+		Sama_2777	0.73	+1.1
3,320,606	-		Sama_2777	0.73	+2.7
3,320,628	-		Sama_2777	0.74	+1.4
3,320,628	-		Sama_2777	0.74	+1.4
3,320,761	-		Sama_2777	0.85	+1.6
3,320,763	-		Sama_2777	0.85	+2.7
3,320,840	-				+0.9
3,320,840	-				-0.1
3,320,871	+				+2.1
3,320,871	+				+1.5
3,320,871	+				+0.8
3,320,872	-				+1.7
3,320,889	-				+0.4
3,320,889	-				+2.7
3,320,932	+				+2.1
3,320,932	+				+0.9
3,320,932	+				+1.3
3,320,932	+				-1.8
3,320,932	+				+1.3
3,320,932	+				-0.1
3,320,933	-				+1.6
3,320,933	-				-0.6
3,320,933	-				+2.3
3,320,967	+				+1.8
3,320,967	+				+1.5
3,320,967	+				+1.8
3,320,967	+				+1.5
3,320,967	+				+1.3
3,320,967	+				-0.3
3,320,967	+				+0.1
3,320,967	+				+0.7
3,320,968	-				+1.7
3,320,968	-				+0.1
3,320,968	-				+3.3
3,320,968	-				+0.7
3,320,968	-				+1.1
3,320,968	-				+1.7
3,320,968	-				+1.9
3,320,991	+				+1.1
3,321,173	+		Sama_2778	0.46	+1.9
3,321,173	+		Sama_2778	0.46	+3.1
3,321,173	+		Sama_2778	0.46	+4.1
3,321,174	-		Sama_2778	0.47	-0.3
3,321,174	-		Sama_2778	0.47	+2.5
3,321,205	+		Sama_2778	0.53	+1.1
3,321,244	-		Sama_2778	0.62	+1.4
3,321,244	-		Sama_2778	0.62	+0.1
3,321,312	-		Sama_2778	0.77	+1.4
3,321,368	+		Sama_2778	0.89	-0.6
3,321,368	+		Sama_2778	0.89	+1.4
3,321,368	+		Sama_2778	0.89	+2.3
3,321,369	-		Sama_2778	0.89	-1.3
3,321,369	-		Sama_2778	0.89	+0.1
3,321,393	-				-0.1
3,321,397	-				+1.1
3,321,397	-				-0.6
3,321,470	+				+0.3
3,321,470	+				+0.9
3,321,471	-				-0.2
3,321,471	-				+0.7
3,321,471	-				-0.5
3,321,471	-				-0.5
3,321,520	+				-0.1
3,321,520	+				+1.2
3,321,520	+				+0.7
3,321,520	+				-0.2
3,321,521	-				-0.1
3,321,521	-				+0.3
3,321,521	-				-0.6
3,321,521	-				-0.4
3,321,521	-				-0.3
3,321,521	-				+0.5
3,321,521	-				+0.3
3,321,521	-				-0.5
3,321,521	-				-1.0
3,321,524	+				+0.8
3,321,524	+				+1.1
3,321,524	+				+1.5
3,321,524	+				+0.9
3,321,524	+				-0.4
3,321,524	+				+0.3
3,321,524	+				-0.6
3,321,524	+				-0.6
3,321,524	+				+0.0
3,321,524	+				+0.9
3,321,524	+				+0.5
3,321,524	+				+1.7
3,321,524	+				-1.2
3,321,524	+				-0.8
3,321,524	+				-1.3
3,321,525	-				-0.3
3,321,525	-				-1.0
3,321,525	-				+0.5
3,321,525	-				+0.5
3,321,525	-				+0.7
3,321,525	-				-0.3
3,321,525	-				+1.5
3,321,587	-		Sama_2779	0.15	-0.0
3,321,587	-		Sama_2779	0.15	-1.2
3,321,618	-		Sama_2779	0.18	-0.0
3,321,643	+		Sama_2779	0.20	+0.1
3,321,643	+		Sama_2779	0.20	-0.6
3,321,656	-		Sama_2779	0.21	-2.4
3,321,656	-		Sama_2779	0.21	+0.3
3,321,656	-		Sama_2779	0.21	+0.7
3,321,656	-		Sama_2779	0.21	-0.3
3,321,656	-		Sama_2779	0.21	-0.0
3,321,810	-		Sama_2779	0.35	-0.5
3,321,810	-		Sama_2779	0.35	-0.7
3,321,842	-		Sama_2779	0.37	-0.3
3,321,880	+		Sama_2779	0.41	-0.9
3,321,880	+		Sama_2779	0.41	-0.5
3,321,881	-		Sama_2779	0.41	+1.6