Strain Fitness in Shewanella amazonensis SB2B around Sama_2727

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,260,634	+				-0.0
3,260,647	+				+0.2
3,260,647	+				-0.6
3,260,647	+				-0.2
3,260,647	+				-0.5
3,260,647	+				-0.4
3,260,647	+				+1.8
3,260,647	+				+0.2
3,260,647	+				+0.4
3,260,688	+				+1.6
3,260,688	+				+1.0
3,260,688	+				-1.1
3,260,705	+				+0.7
3,260,770	+				-0.6
3,260,770	+				-0.5
3,260,770	+				-0.9
3,260,770	+				+0.1
3,260,850	+				-0.9
3,260,850	+				+0.5
3,260,850	+				+1.2
3,260,851	-				-0.3
3,260,851	-				+0.7
3,260,898	+				-1.1
3,260,951	+		Sama_2726	0.15	-0.2
3,260,952	-		Sama_2726	0.15	-1.2
3,260,952	-		Sama_2726	0.15	-1.2
3,261,062	+		Sama_2726	0.31	+1.3
3,261,062	+		Sama_2726	0.31	+0.0
3,261,062	+		Sama_2726	0.31	-0.6
3,261,085	-		Sama_2726	0.34	+1.0
3,261,097	+		Sama_2726	0.36	+0.5
3,261,098	-		Sama_2726	0.36	+0.4
3,261,170	-		Sama_2726	0.46	+0.4
3,261,170	-		Sama_2726	0.46	+1.2
3,261,170	-		Sama_2726	0.46	+0.9
3,261,206	+		Sama_2726	0.52	-0.0
3,261,206	+		Sama_2726	0.52	-1.2
3,261,206	+		Sama_2726	0.52	+0.8
3,261,207	-		Sama_2726	0.52	+0.9
3,261,207	-		Sama_2726	0.52	+0.2
3,261,207	-		Sama_2726	0.52	+2.4
3,261,301	+		Sama_2726	0.66	-0.9
3,261,318	+		Sama_2726	0.68	-0.2
3,261,318	+		Sama_2726	0.68	-0.8
3,261,318	+		Sama_2726	0.68	-1.2
3,261,318	+		Sama_2726	0.68	-0.8
3,261,319	-		Sama_2726	0.68	+0.9
3,261,319	-		Sama_2726	0.68	-0.4
3,261,319	-		Sama_2726	0.68	+1.4
3,261,319	-		Sama_2726	0.68	+0.0
3,261,320	+		Sama_2726	0.68	+0.8
3,261,320	+		Sama_2726	0.68	+0.0
3,261,321	-		Sama_2726	0.68	+0.2
3,261,379	+		Sama_2726	0.77	+0.1
3,261,380	-		Sama_2726	0.77	+0.3
3,261,494	+				-0.3
3,261,495	-				+0.3
3,261,495	-				+1.4
3,261,532	-				-0.0
3,261,532	-				+0.7
3,261,532	-				-0.4
3,261,532	-				+0.0
3,261,535	+				-0.5
3,261,535	+				-0.7
3,261,535	+				+0.5
3,261,576	+				-0.7
3,261,589	-				-0.3
3,261,589	-				+1.4
3,261,630	+				+0.1
3,261,630	+				+0.7
3,261,630	+				+4.3
3,261,630	+				+0.6
3,261,630	+				-0.3
3,261,630	+				-0.1
3,261,630	+				-0.3
3,261,630	+				+5.3
3,261,630	+				+1.0
3,261,630	+				-1.6
3,261,630	+				+1.0
3,261,631	-				+2.3
3,261,631	-				+0.2
3,261,631	-				+0.7
3,261,631	-				-1.3
3,261,631	-				-0.1
3,261,657	+				+0.2
3,261,661	+				-0.7
3,261,662	-				-0.6
3,261,662	-				-2.0
3,261,662	-				-0.2
3,261,667	+				+0.9
3,261,668	-				-0.4
3,261,668	-				-0.6
3,261,668	-				-2.1
3,261,763	+		Sama_2727	0.16	+1.3
3,261,763	+		Sama_2727	0.16	-2.4
3,261,763	+		Sama_2727	0.16	-0.6
3,261,763	+		Sama_2727	0.16	-2.4
3,261,764	-		Sama_2727	0.16	-0.6
3,261,764	-		Sama_2727	0.16	+1.0
3,261,777	+		Sama_2727	0.18	-1.2
3,261,777	+		Sama_2727	0.18	+0.0
3,261,777	+		Sama_2727	0.18	-0.3
3,261,778	-		Sama_2727	0.18	+2.0
3,261,778	-		Sama_2727	0.18	-0.2
3,261,778	-		Sama_2727	0.18	+0.7
3,261,778	-		Sama_2727	0.18	-1.2
3,261,899	+		Sama_2727	0.31	-1.2
3,261,900	-		Sama_2727	0.31	-0.4
3,261,900	-		Sama_2727	0.31	-1.2
3,261,900	-		Sama_2727	0.31	+1.0
3,261,900	-		Sama_2727	0.31	+0.2
3,261,990	+		Sama_2727	0.41	+1.4
3,261,990	+		Sama_2727	0.41	-1.1
3,261,990	+		Sama_2727	0.41	+0.7
3,261,991	-		Sama_2727	0.41	-0.2
3,261,991	-		Sama_2727	0.41	-2.3
3,261,991	-		Sama_2727	0.41	-0.4
3,261,991	-		Sama_2727	0.41	-0.5
3,261,991	-		Sama_2727	0.41	-0.7
3,261,991	-		Sama_2727	0.41	-0.4
3,261,991	-		Sama_2727	0.41	-0.6
3,261,991	-		Sama_2727	0.41	+0.6
3,262,106	+		Sama_2727	0.54	+0.4
3,262,121	+		Sama_2727	0.55	+1.4
3,262,121	+		Sama_2727	0.55	+0.4
3,262,121	+		Sama_2727	0.55	+1.0
3,262,287	+		Sama_2727	0.74	-0.6
3,262,287	+		Sama_2727	0.74	-0.2
3,262,288	-		Sama_2727	0.74	-0.2
3,262,288	-		Sama_2727	0.74	-0.7
3,262,308	+		Sama_2727	0.76	-0.7
3,262,308	+		Sama_2727	0.76	-1.5
3,262,308	+		Sama_2727	0.76	-0.4
3,262,308	+		Sama_2727	0.76	+1.0
3,262,308	+		Sama_2727	0.76	+0.1
3,262,308	+		Sama_2727	0.76	+0.4
3,262,308	+		Sama_2727	0.76	-0.2
3,262,308	+		Sama_2727	0.76	-1.7
3,262,309	-		Sama_2727	0.76	+0.0
3,262,309	-		Sama_2727	0.76	-0.4
3,262,309	-		Sama_2727	0.76	+0.8
3,262,309	-		Sama_2727	0.76	+1.0
3,262,309	-		Sama_2727	0.76	-0.9
3,262,309	-		Sama_2727	0.76	-0.2
3,262,309	-		Sama_2727	0.76	+0.1
3,262,309	-		Sama_2727	0.76	-1.7
3,262,309	-		Sama_2727	0.76	-1.7
3,262,314	-		Sama_2727	0.77	-1.5
3,262,314	-		Sama_2727	0.77	-0.4
3,262,314	-		Sama_2727	0.77	+0.2
3,262,314	-		Sama_2727	0.77	-1.3
3,262,345	-		Sama_2727	0.80	-0.6
3,262,368	+		Sama_2727	0.82	-0.2
3,262,369	-		Sama_2727	0.83	+0.1
3,262,369	-		Sama_2727	0.83	+0.0
3,262,370	+		Sama_2727	0.83	-0.3
3,262,370	+		Sama_2727	0.83	-1.5
3,262,370	+		Sama_2727	0.83	-2.0
3,262,370	+		Sama_2727	0.83	+1.0
3,262,371	-		Sama_2727	0.83	+0.6
3,262,371	-		Sama_2727	0.83	-0.9
3,262,371	-		Sama_2727	0.83	+0.4
3,262,404	-		Sama_2727	0.86	-2.6
3,262,413	-		Sama_2727	0.87	-0.7
3,262,413	-		Sama_2727	0.87	-0.3
3,262,431	+		Sama_2727	0.89	+0.2
3,262,580	-				+0.2
3,262,612	+				-0.8
3,262,612	+				+0.2
3,262,612	+				+2.0
3,262,612	+				-1.2
3,262,612	+				+0.2
3,262,612	+				+0.7
3,262,613	-				-0.8
3,262,618	+				+0.7
3,262,618	+				+0.1
3,262,619	-				+0.8
3,262,619	-				+0.7
3,262,619	-				-1.5
3,262,619	-				+0.8
3,262,732	-				-1.4
3,262,769	+		Sama_2728	0.12	+0.4
3,262,769	+		Sama_2728	0.12	-0.6
3,262,770	-		Sama_2728	0.12	-1.2
3,262,770	-		Sama_2728	0.12	+2.0
3,262,770	-		Sama_2728	0.12	-1.8
3,262,778	+		Sama_2728	0.13	+0.0
3,262,778	+		Sama_2728	0.13	+0.1
3,262,778	+		Sama_2728	0.13	+2.0
3,262,778	+		Sama_2728	0.13	-0.5
3,262,779	-		Sama_2728	0.13	+0.4
3,262,779	-		Sama_2728	0.13	+2.4
3,262,779	-		Sama_2728	0.13	+0.2
3,262,779	-		Sama_2728	0.13	-0.4
3,262,779	-		Sama_2728	0.13	-1.1
3,262,779	-		Sama_2728	0.13	-2.1
3,262,779	-		Sama_2728	0.13	-1.0
3,262,901	+		Sama_2728	0.23	+0.3
3,262,902	-		Sama_2728	0.23	-1.4
3,262,902	-		Sama_2728	0.23	+1.7
3,262,914	+		Sama_2728	0.24	+0.0
3,262,914	+		Sama_2728	0.24	+0.6
3,262,914	+		Sama_2728	0.24	-1.6
3,262,915	-		Sama_2728	0.24	+0.7
3,262,985	+		Sama_2728	0.30	-0.1
3,262,985	+		Sama_2728	0.30	-1.5
3,262,985	+		Sama_2728	0.30	-0.1
3,262,986	-		Sama_2728	0.30	+0.6
3,262,986	-		Sama_2728	0.30	+0.3
3,262,986	-		Sama_2728	0.30	-2.8
3,262,988	+		Sama_2728	0.30	-1.2
3,262,989	-		Sama_2728	0.30	-0.6
3,262,989	-		Sama_2728	0.30	+1.2
3,262,989	-		Sama_2728	0.30	+1.7
3,263,013	+		Sama_2728	0.32	-1.0
3,263,013	+		Sama_2728	0.32	-0.8
3,263,013	+		Sama_2728	0.32	-0.9
3,263,013	+		Sama_2728	0.32	-1.1
3,263,013	+		Sama_2728	0.32	-2.6
3,263,014	-		Sama_2728	0.32	-2.2
3,263,106	+		Sama_2728	0.40	+1.0
3,263,106	+		Sama_2728	0.40	+0.1
3,263,117	+		Sama_2728	0.41	-0.7
3,263,118	-		Sama_2728	0.41	-0.1
3,263,118	-		Sama_2728	0.41	+0.4
3,263,118	-		Sama_2728	0.41	-1.2
3,263,118	-		Sama_2728	0.41	+1.4
3,263,118	-		Sama_2728	0.41	-1.3
3,263,147	+		Sama_2728	0.43	-0.7
3,263,147	+		Sama_2728	0.43	-1.8
3,263,147	+		Sama_2728	0.43	+0.0
3,263,147	+		Sama_2728	0.43	-0.3
3,263,147	+		Sama_2728	0.43	-0.5
3,263,148	-		Sama_2728	0.43	+0.9
3,263,148	-		Sama_2728	0.43	-0.7
3,263,148	-		Sama_2728	0.43	+2.0
3,263,148	-		Sama_2728	0.43	+0.7
3,263,148	-		Sama_2728	0.43	+0.3
3,263,149	+		Sama_2728	0.43	+0.4
3,263,149	+		Sama_2728	0.43	-0.3
3,263,150	-		Sama_2728	0.43	-0.2
3,263,167	+		Sama_2728	0.45	+0.4
3,263,167	+		Sama_2728	0.45	+1.1
3,263,167	+		Sama_2728	0.45	-0.5
3,263,167	+		Sama_2728	0.45	-0.6
3,263,211	+		Sama_2728	0.48	-1.1
3,263,211	+		Sama_2728	0.48	-2.2
3,263,211	+		Sama_2728	0.48	+0.9
3,263,211	+		Sama_2728	0.48	-1.2
3,263,212	-		Sama_2728	0.48	-1.1
3,263,212	-		Sama_2728	0.48	+0.3
3,263,212	-		Sama_2728	0.48	-1.0
3,263,212	-		Sama_2728	0.48	-1.5
3,263,212	-		Sama_2728	0.48	+0.2
3,263,242	+		Sama_2728	0.51	-0.1
3,263,242	+		Sama_2728	0.51	-0.6
3,263,242	+		Sama_2728	0.51	+0.4
3,263,243	-		Sama_2728	0.51	-0.8
3,263,243	-		Sama_2728	0.51	+0.2
3,263,275	+		Sama_2728	0.53	-0.3
3,263,275	+		Sama_2728	0.53	-0.7
3,263,275	+		Sama_2728	0.53	+0.2
3,263,276	-		Sama_2728	0.54	-0.1
3,263,276	-		Sama_2728	0.54	-0.6
3,263,352	-		Sama_2728	0.60	-0.4
3,263,381	+		Sama_2728	0.62	-2.4
3,263,381	+		Sama_2728	0.62	-1.9
3,263,382	-		Sama_2728	0.62	-0.4
3,263,382	-		Sama_2728	0.62	+1.4
3,263,382	-		Sama_2728	0.62	-0.8
3,263,395	+		Sama_2728	0.63	-1.4
3,263,396	-		Sama_2728	0.63	-0.4
3,263,433	+		Sama_2728	0.66	-0.8
3,263,433	+		Sama_2728	0.66	+0.8
3,263,433	+		Sama_2728	0.66	-0.2
3,263,433	+		Sama_2728	0.66	-0.3
3,263,433	+		Sama_2728	0.66	-0.2
3,263,433	+		Sama_2728	0.66	-0.6
3,263,434	-		Sama_2728	0.66	-0.3
3,263,434	-		Sama_2728	0.66	-0.2
3,263,434	-		Sama_2728	0.66	-1.9
3,263,434	-		Sama_2728	0.66	-0.7
3,263,434	-		Sama_2728	0.66	+0.9
3,263,434	-		Sama_2728	0.66	+0.5
3,263,434	-		Sama_2728	0.66	+0.3
3,263,434	-		Sama_2728	0.66	+0.7
3,263,434	-		Sama_2728	0.66	-0.4
3,263,434	-		Sama_2728	0.66	-1.4
3,263,434	-		Sama_2728	0.66	+1.6
3,263,435	+		Sama_2728	0.67	+0.7
3,263,435	+		Sama_2728	0.67	+0.2
3,263,435	+		Sama_2728	0.67	+0.4
3,263,435	+		Sama_2728	0.67	-0.8
3,263,435	+		Sama_2728	0.67	+0.6
3,263,435	+		Sama_2728	0.67	-0.9
3,263,435	+		Sama_2728	0.67	-0.4
3,263,435	+		Sama_2728	0.67	-0.8
3,263,435	+		Sama_2728	0.67	-0.4
3,263,435	+		Sama_2728	0.67	+0.5
3,263,435	+		Sama_2728	0.67	-1.4
3,263,435	+		Sama_2728	0.67	-0.8
3,263,435	+		Sama_2728	0.67	-1.0
3,263,435	+		Sama_2728	0.67	-0.2
3,263,435	+		Sama_2728	0.67	+1.7
3,263,435	+		Sama_2728	0.67	-0.6
3,263,435	+		Sama_2728	0.67	+0.2
3,263,435	+		Sama_2728	0.67	-0.3
3,263,435	+		Sama_2728	0.67	+0.9
3,263,435	+		Sama_2728	0.67	+0.7
3,263,435	+		Sama_2728	0.67	+2.0
3,263,435	+		Sama_2728	0.67	-1.9
3,263,435	+		Sama_2728	0.67	-0.5
3,263,435	+		Sama_2728	0.67	-0.3
3,263,435	+		Sama_2728	0.67	-1.1
3,263,435	+		Sama_2728	0.67	-1.4
3,263,435	+		Sama_2728	0.67	-1.6
3,263,436	-		Sama_2728	0.67	+2.4
3,263,436	-		Sama_2728	0.67	-1.6
3,263,436	-		Sama_2728	0.67	-2.1
3,263,436	-		Sama_2728	0.67	+1.4
3,263,436	-		Sama_2728	0.67	+1.7
3,263,436	-		Sama_2728	0.67	-0.3
3,263,436	-		Sama_2728	0.67	+3.6
3,263,436	-		Sama_2728	0.67	+0.6
3,263,436	-		Sama_2728	0.67	-0.4
3,263,436	-		Sama_2728	0.67	-0.4
3,263,436	-		Sama_2728	0.67	-1.4
3,263,436	-		Sama_2728	0.67	+0.4
3,263,436	-		Sama_2728	0.67	-1.1
3,263,436	-		Sama_2728	0.67	-1.9
3,263,436	-		Sama_2728	0.67	+1.0
3,263,436	-		Sama_2728	0.67	+0.6
3,263,436	-		Sama_2728	0.67	+0.4
3,263,436	-		Sama_2728	0.67	+1.3
3,263,436	-		Sama_2728	0.67	-1.6
3,263,436	-		Sama_2728	0.67	+0.7
3,263,436	-		Sama_2728	0.67	+0.5
3,263,436	-		Sama_2728	0.67	+1.1
3,263,475	+		Sama_2728	0.70	+0.0
3,263,475	+		Sama_2728	0.70	-0.1
3,263,475	+		Sama_2728	0.70	+0.6
3,263,475	+		Sama_2728	0.70	-1.8
3,263,476	-		Sama_2728	0.70	+1.0
3,263,476	-		Sama_2728	0.70	-1.3
3,263,512	+		Sama_2728	0.73	-0.8
3,263,513	-		Sama_2728	0.73	-0.2
3,263,513	-		Sama_2728	0.73	+0.2
3,263,513	-		Sama_2728	0.73	+0.7