Strain Fitness in Shewanella amazonensis SB2B around Sama_2667

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,193,015	+		Sama_2666	0.50	-0.8
3,193,016	-		Sama_2666	0.50	-1.1
3,193,016	-		Sama_2666	0.50	-1.8
3,193,053	+		Sama_2666	0.52	+0.5
3,193,053	+		Sama_2666	0.52	+0.1
3,193,054	-		Sama_2666	0.52	-1.2
3,193,054	-		Sama_2666	0.52	+0.8
3,193,054	-		Sama_2666	0.52	-2.9
3,193,054	-		Sama_2666	0.52	+1.1
3,193,054	-		Sama_2666	0.52	+0.2
3,193,105	+		Sama_2666	0.55	-1.1
3,193,105	+		Sama_2666	0.55	-0.1
3,193,105	+		Sama_2666	0.55	-1.5
3,193,105	+		Sama_2666	0.55	-0.2
3,193,105	+		Sama_2666	0.55	-0.2
3,193,105	+		Sama_2666	0.55	-1.0
3,193,105	+		Sama_2666	0.55	+0.2
3,193,105	+		Sama_2666	0.55	+0.6
3,193,105	+		Sama_2666	0.55	+1.2
3,193,105	+		Sama_2666	0.55	-0.5
3,193,105	+		Sama_2666	0.55	-0.3
3,193,105	+		Sama_2666	0.55	-0.6
3,193,106	-		Sama_2666	0.55	-1.3
3,193,106	-		Sama_2666	0.55	-0.6
3,193,106	-		Sama_2666	0.55	-1.6
3,193,106	-		Sama_2666	0.55	-0.9
3,193,106	-		Sama_2666	0.55	+1.4
3,193,106	-		Sama_2666	0.55	-1.4
3,193,106	-		Sama_2666	0.55	-1.3
3,193,106	-		Sama_2666	0.55	+2.5
3,193,106	-		Sama_2666	0.55	+0.4
3,193,106	-		Sama_2666	0.55	+0.8
3,193,106	-		Sama_2666	0.55	-0.4
3,193,106	-		Sama_2666	0.55	-0.2
3,193,107	+		Sama_2666	0.55	-1.6
3,193,107	+		Sama_2666	0.55	-0.2
3,193,107	+		Sama_2666	0.55	-0.6
3,193,107	+		Sama_2666	0.55	-0.3
3,193,107	+		Sama_2666	0.55	-0.9
3,193,107	+		Sama_2666	0.55	+0.9
3,193,107	+		Sama_2666	0.55	-0.1
3,193,107	+		Sama_2666	0.55	-0.4
3,193,107	+		Sama_2666	0.55	+1.0
3,193,108	-		Sama_2666	0.55	-1.2
3,193,108	-		Sama_2666	0.55	+0.2
3,193,108	-		Sama_2666	0.55	+0.6
3,193,108	-		Sama_2666	0.55	+2.9
3,193,108	-		Sama_2666	0.55	+1.5
3,193,108	-		Sama_2666	0.55	-1.2
3,193,108	-		Sama_2666	0.55	+1.6
3,193,108	-		Sama_2666	0.55	+1.1
3,193,162	+		Sama_2666	0.58	-0.4
3,193,162	+		Sama_2666	0.58	-0.6
3,193,162	+		Sama_2666	0.58	-0.6
3,193,163	-		Sama_2666	0.58	-2.2
3,193,163	-		Sama_2666	0.58	-1.4
3,193,163	-		Sama_2666	0.58	+0.4
3,193,163	-		Sama_2666	0.58	-0.5
3,193,163	-		Sama_2666	0.58	-0.8
3,193,163	-		Sama_2666	0.58	+0.1
3,193,163	-		Sama_2666	0.58	+0.6
3,193,163	-		Sama_2666	0.58	-0.9
3,193,287	-		Sama_2666	0.66	-0.6
3,193,287	-		Sama_2666	0.66	-1.1
3,193,384	+		Sama_2666	0.71	-1.1
3,193,470	+		Sama_2666	0.76	+2.4
3,193,495	+		Sama_2666	0.78	-1.9
3,193,496	-		Sama_2666	0.78	-0.1
3,193,496	-		Sama_2666	0.78	-0.0
3,193,538	+		Sama_2666	0.80	-1.0
3,193,539	-		Sama_2666	0.80	+0.5
3,193,539	-		Sama_2666	0.80	+3.2
3,193,539	-		Sama_2666	0.80	-1.3
3,193,539	-		Sama_2666	0.80	-0.9
3,193,741	+				+2.2
3,193,741	+				+0.4
3,193,741	+				-0.4
3,193,741	+				-1.1
3,193,741	+				-0.1
3,193,741	+				+1.4
3,193,741	+				-1.1
3,193,741	+				+0.0
3,193,742	-				-0.1
3,193,742	-				-1.4
3,193,742	-				-0.7
3,193,742	-				-1.4
3,193,742	-				+0.4
3,193,742	-				+1.6
3,193,742	-				+1.0
3,193,742	-				+0.9
3,193,742	-				+0.4
3,193,742	-				-0.4
3,193,742	-				+0.9
3,193,742	-				-0.9
3,193,824	+				+1.1
3,193,824	+				+0.1
3,193,825	-				+1.4
3,193,825	-				+0.2
3,193,825	-				-0.4
3,193,825	-				-0.9
3,193,825	-				-1.1
3,193,825	-				-2.1
3,193,825	-				+0.8
3,193,825	-				+0.6
3,193,825	-				-0.8
3,193,825	-				-0.1
3,193,826	-				-0.8
3,193,830	+				-1.4
3,193,830	+				-0.3
3,193,919	-				+1.4
3,193,961	+				-1.0
3,193,962	-				-0.4
3,193,974	+				+0.4
3,193,974	+				+1.4
3,193,975	-				-0.4
3,193,975	-				-0.2
3,193,993	-				+1.4
3,193,993	-				-2.5
3,193,993	-				-0.1
3,194,013	+				+5.2
3,194,013	+				+0.1
3,194,013	+				-0.2
3,194,013	+				-2.0
3,194,013	+				-1.2
3,194,013	+				+0.9
3,194,013	+				-1.0
3,194,013	+				+1.0
3,194,013	+				-0.1
3,194,013	+				+0.0
3,194,013	+				-0.1
3,194,014	-				+0.6
3,194,014	-				-1.5
3,194,014	-				-0.7
3,194,014	-				+0.5
3,194,014	-				-0.8
3,194,014	-				+0.9
3,194,014	-				+1.4
3,194,043	+				-0.2
3,194,044	-				+1.5
3,194,044	-				-0.6
3,194,114	+		Sama_2667	0.24	+0.9
3,194,115	-		Sama_2667	0.24	-0.2
3,194,115	-		Sama_2667	0.24	+0.1
3,194,127	+		Sama_2667	0.27	-0.9
3,194,128	-		Sama_2667	0.28	-0.5
3,194,187	+		Sama_2667	0.42	-0.6
3,194,187	+		Sama_2667	0.42	-0.1
3,194,194	+		Sama_2667	0.43	-0.2
3,194,194	+		Sama_2667	0.43	-0.4
3,194,195	-		Sama_2667	0.44	+2.9
3,194,195	-		Sama_2667	0.44	-2.3
3,194,308	+		Sama_2667	0.71	-0.7
3,194,308	+		Sama_2667	0.71	+0.9
3,194,308	+		Sama_2667	0.71	+0.2
3,194,308	+		Sama_2667	0.71	-0.2
3,194,308	+		Sama_2667	0.71	+0.0
3,194,308	+		Sama_2667	0.71	-2.1
3,194,308	+		Sama_2667	0.71	-0.4
3,194,308	+		Sama_2667	0.71	+0.9
3,194,309	-		Sama_2667	0.71	-0.5
3,194,317	+		Sama_2667	0.73	-0.9
3,194,317	+		Sama_2667	0.73	-1.1
3,194,317	+		Sama_2667	0.73	-0.2
3,194,318	-		Sama_2667	0.73	+0.6
3,194,318	-		Sama_2667	0.73	-1.1
3,194,318	-		Sama_2667	0.73	-1.3
3,194,318	-		Sama_2667	0.73	-0.6
3,194,318	-		Sama_2667	0.73	-0.5
3,194,398	-				-0.5
3,194,398	-				+1.6
3,194,416	+				+1.9
3,194,417	-				+0.9
3,194,425	+				+0.6
3,194,425	+				-0.3
3,194,425	+				+1.0
3,194,491	+				-1.4
3,194,594	+		Sama_2668	0.22	-0.2
3,195,138	+				+0.8
3,195,200	-				+0.7
3,195,240	-				+1.4
3,195,311	+		Sama_2669	0.13	+1.4
3,195,312	-		Sama_2669	0.13	-1.4
3,195,314	+		Sama_2669	0.13	+0.6
3,195,314	+		Sama_2669	0.13	+0.4
3,195,314	+		Sama_2669	0.13	+2.5
3,195,390	+		Sama_2669	0.25	+1.4
3,195,390	+		Sama_2669	0.25	-2.8
3,195,390	+		Sama_2669	0.25	+0.4
3,195,391	-		Sama_2669	0.25	-2.2