Strain Fitness in Shewanella amazonensis SB2B around Sama_2579

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,085,056	+				+1.6
3,085,058	+				-0.5
3,085,068	+				+0.1
3,085,100	+				-2.0
3,085,100	+				-1.4
3,085,100	+				-0.9
3,085,114	+				-0.9
3,085,150	+				+0.3
3,085,150	+				-1.2
3,085,168	+				-2.2
3,085,273	+		Sama_2578	0.20	-0.6
3,085,273	+		Sama_2578	0.20	-0.0
3,085,438	+		Sama_2578	0.38	-1.1
3,085,438	+		Sama_2578	0.38	-0.7
3,085,472	+		Sama_2578	0.42	-0.5
3,085,472	+		Sama_2578	0.42	+0.7
3,085,475	+		Sama_2578	0.43	-0.2
3,085,475	+		Sama_2578	0.43	-0.9
3,085,555	+		Sama_2578	0.52	-0.6
3,085,555	+		Sama_2578	0.52	-0.4
3,085,581	+		Sama_2578	0.55	-0.8
3,085,581	+		Sama_2578	0.55	-0.2
3,085,586	+		Sama_2578	0.55	+0.1
3,085,608	+		Sama_2578	0.58	-1.6
3,085,618	+		Sama_2578	0.59	-0.8
3,085,736	+		Sama_2578	0.72	+0.6
3,085,736	+		Sama_2578	0.72	-0.7
3,085,823	+		Sama_2578	0.82	-1.3
3,085,859	+		Sama_2578	0.86	+1.5
3,085,859	+		Sama_2578	0.86	-2.0
3,085,966	+				+0.7
3,085,966	+				+1.0
3,086,021	+				+1.9
3,087,532	+				-1.0
3,087,533	-				-1.4
3,087,533	-				-0.8
3,087,533	-				+0.3
3,087,533	-				-1.1
3,087,533	-				-1.2
3,087,576	+				-1.4
3,087,576	+				+0.1
3,087,585	+				+2.3
3,087,585	+				-1.1
3,087,585	+				-0.9
3,087,585	+				-0.9
3,087,585	+				-0.3
3,087,586	-				-1.1
3,087,586	-				+2.2
3,087,603	+				-1.2
3,087,646	-				-2.0
3,087,646	-				-1.4
3,087,699	+				+0.3
3,087,699	+				+0.6
3,087,700	-				+2.2
3,087,706	+				+0.4
3,087,706	+				+0.4
3,087,706	+				+1.3
3,087,707	-				-1.7
3,087,712	+				-0.4
3,087,712	+				-0.9
3,087,712	+				-0.8
3,087,713	-				+1.7
3,087,716	+				+0.1
3,087,716	+				+0.3
3,087,716	+				+0.6
3,087,717	-				-1.1
3,087,717	-				+0.3
3,087,717	-				-0.7
3,087,717	-				+0.7
3,087,717	-				-0.5
3,087,722	+				+0.4
3,087,722	+				+1.3
3,087,722	+				-2.0
3,087,722	+				-1.0
3,087,722	+				-0.7
3,087,723	-				-0.7
3,087,723	-				+2.9
3,087,723	-				+0.0
3,087,795	-				-0.7
3,087,795	-				+1.3
3,087,795	-				+2.4
3,087,906	-		Sama_2580	0.13	-0.3
3,087,908	+		Sama_2580	0.13	+0.7
3,087,908	+		Sama_2580	0.13	-1.8
3,087,908	+		Sama_2580	0.13	+0.5
3,087,908	+		Sama_2580	0.13	+0.6
3,087,909	-		Sama_2580	0.13	+1.1
3,087,909	-		Sama_2580	0.13	-0.7
3,087,909	-		Sama_2580	0.13	+0.7
3,087,909	-		Sama_2580	0.13	+0.3
3,087,911	+		Sama_2580	0.13	-0.9
3,087,911	+		Sama_2580	0.13	-1.4
3,087,911	+		Sama_2580	0.13	-0.9
3,087,911	+		Sama_2580	0.13	+1.3
3,087,911	+		Sama_2580	0.13	+0.1
3,087,911	+		Sama_2580	0.13	+0.2
3,087,911	+		Sama_2580	0.13	+1.3
3,087,911	+		Sama_2580	0.13	+0.0
3,087,912	-		Sama_2580	0.13	+0.7
3,087,912	-		Sama_2580	0.13	+0.3
3,087,912	-		Sama_2580	0.13	-0.1
3,087,950	+		Sama_2580	0.17	+1.7
3,087,950	+		Sama_2580	0.17	-0.6
3,087,951	-		Sama_2580	0.17	+0.9
3,088,040	+		Sama_2580	0.24	-0.0
3,088,041	-		Sama_2580	0.24	+0.3
3,088,089	-		Sama_2580	0.28	+2.5
3,088,089	-		Sama_2580	0.28	-1.9
3,088,217	-		Sama_2580	0.38	+0.2
3,088,217	-		Sama_2580	0.38	+0.1
3,088,220	-		Sama_2580	0.38	-0.9
3,088,220	-		Sama_2580	0.38	-0.9
3,088,220	-		Sama_2580	0.38	+0.3
3,088,220	-		Sama_2580	0.38	-0.7
3,088,220	-		Sama_2580	0.38	-1.4
3,088,342	+		Sama_2580	0.48	+0.6
3,088,343	-		Sama_2580	0.48	-1.6
3,088,362	-		Sama_2580	0.50	-0.2
3,088,397	+		Sama_2580	0.52	-1.1
3,088,398	-		Sama_2580	0.53	+1.3
3,088,406	+		Sama_2580	0.53	+0.9
3,088,407	-		Sama_2580	0.53	-2.1
3,088,470	+		Sama_2580	0.58	-1.3
3,088,471	-		Sama_2580	0.58	-2.8
3,088,471	-		Sama_2580	0.58	-0.4
3,088,471	-		Sama_2580	0.58	+0.3
3,088,474	+		Sama_2580	0.59	+0.1
3,088,474	+		Sama_2580	0.59	+3.3
3,088,474	+		Sama_2580	0.59	+0.4
3,088,474	+		Sama_2580	0.59	-0.6
3,088,475	-		Sama_2580	0.59	-0.9
3,088,497	+		Sama_2580	0.61	-1.2
3,088,497	+		Sama_2580	0.61	+0.1
3,088,498	-		Sama_2580	0.61	+2.3
3,088,498	-		Sama_2580	0.61	+0.6
3,088,498	-		Sama_2580	0.61	+0.3
3,088,498	-		Sama_2580	0.61	-1.2
3,088,506	+		Sama_2580	0.61	+1.3
3,088,507	-		Sama_2580	0.61	-1.3
3,088,507	-		Sama_2580	0.61	-0.2
3,088,558	+		Sama_2580	0.65	+1.7
3,088,558	+		Sama_2580	0.65	+0.3
3,088,558	+		Sama_2580	0.65	-0.7
3,088,558	+		Sama_2580	0.65	+1.3
3,088,558	+		Sama_2580	0.65	-2.0
3,088,558	+		Sama_2580	0.65	+0.3
3,088,558	+		Sama_2580	0.65	-1.0
3,088,558	+		Sama_2580	0.65	-1.1
3,088,558	+		Sama_2580	0.65	+0.3
3,088,559	-		Sama_2580	0.66	-0.0
3,088,559	-		Sama_2580	0.66	-2.2
3,088,559	-		Sama_2580	0.66	+0.4
3,088,559	-		Sama_2580	0.66	+1.3
3,088,559	-		Sama_2580	0.66	-0.6
3,088,559	-		Sama_2580	0.66	-3.2
3,088,562	+		Sama_2580	0.66	+0.9
3,088,562	+		Sama_2580	0.66	-0.7
3,088,562	+		Sama_2580	0.66	+0.3
3,088,562	+		Sama_2580	0.66	+1.0
3,088,562	+		Sama_2580	0.66	-0.4
3,088,562	+		Sama_2580	0.66	+0.3
3,088,562	+		Sama_2580	0.66	+0.3
3,088,563	-		Sama_2580	0.66	+0.7
3,088,563	-		Sama_2580	0.66	-0.1
3,088,563	-		Sama_2580	0.66	-0.6
3,088,563	-		Sama_2580	0.66	+0.3
3,088,563	-		Sama_2580	0.66	-1.8
3,088,563	-		Sama_2580	0.66	+0.1
3,088,563	-		Sama_2580	0.66	-1.3
3,088,563	-		Sama_2580	0.66	+0.1
3,088,563	-		Sama_2580	0.66	-0.3
3,088,563	-		Sama_2580	0.66	-0.0
3,088,563	-		Sama_2580	0.66	+0.8