Strain Fitness in Shewanella amazonensis SB2B around Sama_2474

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,976,352	+		Sama_2472	0.14	+1.8
2,976,352	+		Sama_2472	0.14	-1.6
2,976,393	+		Sama_2472	0.21	+0.5
2,976,393	+		Sama_2472	0.21	-0.4
2,976,393	+		Sama_2472	0.21	-0.1
2,976,446	+		Sama_2472	0.31	+0.7
2,976,446	+		Sama_2472	0.31	+2.4
2,976,447	-		Sama_2472	0.31	-0.2
2,976,447	-		Sama_2472	0.31	+2.1
2,976,447	-		Sama_2472	0.31	-0.9
2,976,664	+		Sama_2472	0.69	+2.8
2,976,786	+				+0.0
2,976,786	+				-1.8
2,977,300	+				+1.0
2,977,365	+				-1.3
2,977,366	-				+1.6
2,977,387	+		Sama_2474	0.11	+1.1
2,977,436	+		Sama_2474	0.20	+0.1
2,977,437	-		Sama_2474	0.20	+1.5
2,977,437	-		Sama_2474	0.20	+1.2
2,977,437	-		Sama_2474	0.20	+0.5
2,977,437	-		Sama_2474	0.20	+0.6
2,977,437	-		Sama_2474	0.20	+0.8
2,977,443	-		Sama_2474	0.21	+0.2
2,977,443	-		Sama_2474	0.21	-1.0
2,977,481	+		Sama_2474	0.28	-0.4
2,977,482	-		Sama_2474	0.29	-0.2
2,977,482	-		Sama_2474	0.29	-1.4
2,977,536	+		Sama_2474	0.38	+1.6
2,977,537	-		Sama_2474	0.39	-2.3
2,977,550	+		Sama_2474	0.41	-2.4
2,977,550	+		Sama_2474	0.41	-1.0
2,977,550	+		Sama_2474	0.41	+0.8
2,977,550	+		Sama_2474	0.41	-0.5
2,977,551	-		Sama_2474	0.41	+0.3
2,977,551	-		Sama_2474	0.41	+1.3
2,977,551	-		Sama_2474	0.41	-0.6
2,977,551	-		Sama_2474	0.41	+2.2
2,977,551	-		Sama_2474	0.41	-1.8
2,977,551	-		Sama_2474	0.41	+0.7
2,977,551	-		Sama_2474	0.41	+1.3
2,977,551	-		Sama_2474	0.41	-2.1
2,977,551	-		Sama_2474	0.41	+0.5
2,977,559	+		Sama_2474	0.43	-2.9
2,977,559	+		Sama_2474	0.43	-2.7
2,977,559	+		Sama_2474	0.43	-0.5
2,977,560	-		Sama_2474	0.43	+0.5
2,977,560	-		Sama_2474	0.43	-1.2
2,977,560	-		Sama_2474	0.43	-1.9
2,977,560	-		Sama_2474	0.43	-0.4
2,977,560	-		Sama_2474	0.43	-1.8
2,977,564	+		Sama_2474	0.44	-1.6
2,977,565	-		Sama_2474	0.44	+0.1
2,977,565	-		Sama_2474	0.44	-0.3
2,977,565	-		Sama_2474	0.44	+0.5
2,977,649	+		Sama_2474	0.59	+1.2
2,977,650	-		Sama_2474	0.59	-1.8
2,977,716	+		Sama_2474	0.72	+1.0
2,977,717	-		Sama_2474	0.72	+0.9
2,977,780	-		Sama_2474	0.83	-0.4
2,977,799	+		Sama_2474	0.87	+1.1
2,977,909	+				-0.5
2,977,914	+				-0.8
2,977,915	-				+0.3
2,977,934	+				+0.5
2,977,934	+				-1.2
2,977,934	+				-0.9
2,977,935	-				+1.2
2,977,935	-				+0.5
2,977,935	-				+0.9
2,977,935	-				-0.7
2,977,935	-				+0.3
2,977,991	+				+0.8
2,977,991	+				-1.7
2,977,992	-				-1.2
2,977,992	-				+0.3
2,977,992	-				-0.2
2,977,992	-				-0.1
2,978,041	+				-0.9
2,978,041	+				+0.2
2,978,041	+				+0.5
2,978,042	-				-0.8
2,978,042	-				-0.5
2,978,042	-				-0.1
2,978,042	-				-1.6
2,978,042	-				+2.2
2,978,114	+				+2.6
2,978,115	-				+4.0
2,978,115	-				+0.5
2,978,441	+		Sama_2475	0.33	-1.0
2,978,441	+		Sama_2475	0.33	+1.1
2,978,441	+		Sama_2475	0.33	+0.0
2,978,441	+		Sama_2475	0.33	-0.3
2,978,442	-		Sama_2475	0.33	+0.0
2,978,465	+		Sama_2475	0.35	+0.6
2,978,465	+		Sama_2475	0.35	+0.5
2,978,465	+		Sama_2475	0.35	-0.9
2,978,466	-		Sama_2475	0.36	-0.4
2,978,466	-		Sama_2475	0.36	-0.9
2,978,510	+		Sama_2475	0.40	+0.0
2,978,510	+		Sama_2475	0.40	-2.2
2,978,511	-		Sama_2475	0.40	+0.2
2,978,511	-		Sama_2475	0.40	+0.5
2,978,511	-		Sama_2475	0.40	-0.2
2,978,720	+		Sama_2475	0.58	-0.5
2,978,721	-		Sama_2475	0.58	+0.2
2,978,778	-		Sama_2475	0.64	-1.4
2,978,783	+		Sama_2475	0.64	+0.2
2,978,784	-		Sama_2475	0.64	-1.4
2,978,789	+		Sama_2475	0.65	-0.2
2,978,801	+		Sama_2475	0.66	-0.2
2,978,802	-		Sama_2475	0.66	-1.1
2,978,802	-		Sama_2475	0.66	-0.1
2,978,807	+		Sama_2475	0.66	-1.4
2,978,807	+		Sama_2475	0.66	+0.6
2,978,807	+		Sama_2475	0.66	-0.4
2,978,807	+		Sama_2475	0.66	+2.1
2,978,808	-		Sama_2475	0.66	-0.5
2,978,808	-		Sama_2475	0.66	-2.0
2,978,819	+		Sama_2475	0.67	+0.2
2,978,820	-		Sama_2475	0.67	-1.0
2,978,838	-		Sama_2475	0.69	-0.5