Strain Fitness in Shewanella amazonensis SB2B around Sama_2472

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,975,290	+				+1.0
2,975,290	+				-1.1
2,975,291	-				-0.4
2,975,291	-				-1.8
2,975,291	-				+0.0
2,975,291	-				+1.4
2,975,291	-				+0.2
2,975,291	-				+0.5
2,975,291	-				-1.2
2,975,292	+				-2.1
2,975,349	-				-1.0
2,975,349	-				-2.5
2,975,349	-				-1.2
2,975,349	-				+1.8
2,975,371	-				+2.2
2,975,371	-				-0.1
2,975,371	-				-0.7
2,975,371	-				-0.3
2,975,389	+				-1.4
2,975,390	-				+0.5
2,975,495	+				-1.0
2,975,495	+				+0.2
2,975,496	-				-0.4
2,975,499	+				-0.7
2,975,499	+				-0.2
2,975,500	-				-1.2
2,975,500	-				+0.5
2,975,500	-				-0.9
2,975,534	+		Sama_2470	0.12	-1.5
2,975,535	-		Sama_2470	0.12	+0.5
2,975,619	+		Sama_2470	0.37	-0.2
2,975,619	+		Sama_2470	0.37	-0.2
2,975,641	+		Sama_2470	0.44	-0.7
2,975,641	+		Sama_2470	0.44	+0.6
2,975,641	+		Sama_2470	0.44	-0.4
2,975,641	+		Sama_2470	0.44	-0.9
2,975,666	+		Sama_2470	0.52	-0.2
2,975,666	+		Sama_2470	0.52	-0.1
2,975,667	-		Sama_2470	0.52	+1.2
2,975,696	+		Sama_2470	0.61	+1.8
2,975,697	-		Sama_2470	0.61	+0.2
2,975,697	-		Sama_2470	0.61	+0.0
2,975,732	+		Sama_2470	0.72	-0.1
2,975,733	-		Sama_2470	0.72	+1.6
2,975,737	+		Sama_2470	0.73	-1.2
2,975,737	+		Sama_2470	0.73	+1.2
2,975,737	+		Sama_2470	0.73	-0.5
2,975,737	+		Sama_2470	0.73	+0.8
2,975,747	+		Sama_2470	0.76	-1.4
2,975,765	-		Sama_2470	0.82	-0.8
2,975,765	-		Sama_2470	0.82	-0.2
2,975,816	+				-1.7
2,975,817	-				+0.2
2,975,853	-				-0.9
2,975,886	+				-0.0
2,975,886	+				-1.1
2,975,886	+				-0.5
2,975,886	+				-0.7
2,975,886	+				+0.8
2,975,886	+				-1.5
2,975,886	+				+0.1
2,975,886	+				-1.7
2,975,886	+				+1.2
2,975,886	+				-0.3
2,975,886	+				-0.7
2,975,887	-				-0.9
2,975,887	-				+0.8
2,975,887	-				-0.2
2,975,887	-				+0.6
2,975,887	-				+0.9
2,975,887	-				-0.2
2,975,887	-				-1.2
2,975,887	-				-1.0
2,975,887	-				+0.8
2,975,887	-				+0.8
2,975,887	-				-0.5
2,975,887	-				-0.7
2,975,888	+				+0.5
2,975,888	+				+1.5
2,975,888	+				-2.7
2,975,889	-				-1.1
2,975,889	-				+0.7
2,975,938	+				-1.2
2,975,939	-				-1.6
2,975,958	+				-0.9
2,975,958	+				-0.5
2,975,958	+				-2.3
2,975,958	+				-1.8
2,975,959	-				-0.5
2,975,959	-				+0.7
2,975,959	-				+0.5
2,975,961	+				+0.5
2,975,961	+				-0.0
2,975,961	+				+0.6
2,975,961	+				-1.1
2,975,962	-				-1.4
2,975,962	-				-0.2
2,975,969	+				+0.5
2,975,969	+				-0.2
2,975,970	-				+0.2
2,975,980	+		Sama_2471	0.12	-1.2
2,976,058	+		Sama_2471	0.36	-0.9
2,976,141	+		Sama_2471	0.61	-0.1
2,976,141	+		Sama_2471	0.61	+0.5
2,976,141	+		Sama_2471	0.61	+0.5
2,976,244	+				-0.3
2,976,352	+		Sama_2472	0.14	+1.8
2,976,352	+		Sama_2472	0.14	-1.6
2,976,393	+		Sama_2472	0.21	+0.5
2,976,393	+		Sama_2472	0.21	-0.4
2,976,393	+		Sama_2472	0.21	-0.1
2,976,446	+		Sama_2472	0.31	+0.7
2,976,446	+		Sama_2472	0.31	+2.4
2,976,447	-		Sama_2472	0.31	-0.2
2,976,447	-		Sama_2472	0.31	+2.1
2,976,447	-		Sama_2472	0.31	-0.9
2,976,664	+		Sama_2472	0.69	+2.8
2,976,786	+				+0.0
2,976,786	+				-1.8
2,977,300	+				+1.0
2,977,365	+				-1.3
2,977,366	-				+1.6
2,977,387	+		Sama_2474	0.11	+1.1
2,977,436	+		Sama_2474	0.20	+0.1
2,977,437	-		Sama_2474	0.20	+1.5
2,977,437	-		Sama_2474	0.20	+1.2
2,977,437	-		Sama_2474	0.20	+0.5
2,977,437	-		Sama_2474	0.20	+0.6
2,977,437	-		Sama_2474	0.20	+0.8
2,977,443	-		Sama_2474	0.21	+0.2
2,977,443	-		Sama_2474	0.21	-1.0
2,977,481	+		Sama_2474	0.28	-0.4
2,977,482	-		Sama_2474	0.29	-0.2
2,977,482	-		Sama_2474	0.29	-1.4
2,977,536	+		Sama_2474	0.38	+1.6
2,977,537	-		Sama_2474	0.39	-2.3
2,977,550	+		Sama_2474	0.41	-2.4
2,977,550	+		Sama_2474	0.41	-1.0
2,977,550	+		Sama_2474	0.41	+0.8
2,977,550	+		Sama_2474	0.41	-0.5
2,977,551	-		Sama_2474	0.41	+0.3
2,977,551	-		Sama_2474	0.41	+1.3
2,977,551	-		Sama_2474	0.41	-0.6
2,977,551	-		Sama_2474	0.41	+2.2
2,977,551	-		Sama_2474	0.41	-1.8
2,977,551	-		Sama_2474	0.41	+0.7
2,977,551	-		Sama_2474	0.41	+1.3
2,977,551	-		Sama_2474	0.41	-2.1
2,977,551	-		Sama_2474	0.41	+0.5
2,977,559	+		Sama_2474	0.43	-2.9
2,977,559	+		Sama_2474	0.43	-2.7
2,977,559	+		Sama_2474	0.43	-0.5
2,977,560	-		Sama_2474	0.43	+0.5
2,977,560	-		Sama_2474	0.43	-1.2
2,977,560	-		Sama_2474	0.43	-1.9
2,977,560	-		Sama_2474	0.43	-0.4
2,977,560	-		Sama_2474	0.43	-1.8
2,977,564	+		Sama_2474	0.44	-1.6
2,977,565	-		Sama_2474	0.44	+0.1
2,977,565	-		Sama_2474	0.44	-0.3
2,977,565	-		Sama_2474	0.44	+0.5
2,977,649	+		Sama_2474	0.59	+1.2
2,977,650	-		Sama_2474	0.59	-1.8
2,977,716	+		Sama_2474	0.72	+1.0
2,977,717	-		Sama_2474	0.72	+0.9
2,977,780	-		Sama_2474	0.83	-0.4
2,977,799	+		Sama_2474	0.87	+1.1